RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 HSP90AB1P08238 724 aaKnown RBP6.88□□□□□ -1.31
LRIT3-201ENST00000327908 CALD1Q05682 793 aaKnown RBP6.88□□□□□ -1.31
LRIT3-201ENST00000327908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.88□□□□□ -1.31
LRIT3-201ENST00000327908 LTN1O94822 1766 aa6.88□□□□□ -1.31
LRIT3-201ENST00000327908 CRB1P82279 1406 aa6.88□□□□□ -1.31
LRIT3-201ENST00000327908 FNBP4Q8N3X1 1017 aaPredicted RBP6.88□□□□□ -1.31
LRIT3-201ENST00000327908 NCAPD2Q15021 1401 aa6.88□□□□□ -1.31
LRIT3-201ENST00000327908 WDR17Q8IZU2 1322 aa6.88□□□□□ -1.31
LRIT3-201ENST00000327908 VPS72Q15906 364 aa6.88□□□□□ -1.31
LRIT3-201ENST00000327908 AMOTQ4VCS5 1084 aa6.88□□□□□ -1.31
LRIT3-201ENST00000327908 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
LRIT3-201ENST00000327908 HOXC9P31274 260 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 CC2D1BQ5T0F9 858 aaKnown RBP6.87□□□□□ -1.31
LRIT3-201ENST00000327908 UNC5CLQ8IV45 518 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 KIAA0232Q92628 1395 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 MAP3K19Q56UN5 1328 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 PARP4Q9UKK3 1724 aaKnown RBP6.87□□□□□ -1.31
LRIT3-201ENST00000327908 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 NRAPQ86VF7 1730 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 BARGINQ6ZT62 677 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 PHF23Q9BUL5 403 aaPredicted RBP6.87□□□□□ -1.31
LRIT3-201ENST00000327908 OVOS2A0A0G2JMS6 1433 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 COL18A1P39060 1754 aa6.87□□□□□ -1.31
LRIT3-201ENST00000327908 FCHSD2O94868 740 aa6.86□□□□□ -1.31
LRIT3-201ENST00000327908 COL5A2P05997 1499 aaPredicted RBP6.86□□□□□ -1.31
LRIT3-201ENST00000327908 ATRNO75882 1429 aa6.86□□□□□ -1.31
LRIT3-201ENST00000327908 HTATSF1O43719 755 aaKnown RBP6.86□□□□□ -1.31
LRIT3-201ENST00000327908 GAS2L2Q8NHY3 880 aa6.86□□□□□ -1.31
LRIT3-201ENST00000327908 POLKQ9UBT6 870 aa6.86□□□□□ -1.31
LRIT3-201ENST00000327908 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
LRIT3-201ENST00000327908 MAPK8IP3Q9UPT6 1336 aa6.86□□□□□ -1.31
LRIT3-201ENST00000327908 TATP17735 454 aaPredicted RBP6.86□□□□□ -1.31
LRIT3-201ENST00000327908 XPCQ01831 940 aaPredicted RBP6.86□□□□□ -1.31
LRIT3-201ENST00000327908 RAPGEF4Q8WZA2 1011 aa6.86□□□□□ -1.31
LRIT3-201ENST00000327908 MTHFSP49914 203 aa6.85□□□□□ -1.31
LRIT3-201ENST00000327908 PLEKHO1Q53GL0 409 aaPredicted RBP6.85□□□□□ -1.31
LRIT3-201ENST00000327908 ANKRD24Q8TF21 1146 aa6.85□□□□□ -1.31
LRIT3-201ENST00000327908 MAP2P11137 1827 aaKnown RBP6.85□□□□□ -1.31
LRIT3-201ENST00000327908 ERBB3P21860 1342 aa6.85□□□□□ -1.31
LRIT3-201ENST00000327908 COL3A1P02461 1466 aaPredicted RBP6.85□□□□□ -1.31
LRIT3-201ENST00000327908 IGSF1Q8N6C5 1336 aa6.85□□□□□ -1.31
LRIT3-201ENST00000327908 KDRP35968 1356 aa6.84□□□□□ -1.31
LRIT3-201ENST00000327908 TCP11L2Q8N4U5 519 aa6.84□□□□□ -1.31
LRIT3-201ENST00000327908 USP21Q9UK80 565 aa6.84□□□□□ -1.31
LRIT3-201ENST00000327908 RBM6P78332 1123 aaKnown RBP6.84□□□□□ -1.31
LRIT3-201ENST00000327908 NUTM2BA6NNL0 878 aaPredicted RBP6.84□□□□□ -1.32
LRIT3-201ENST00000327908 NUTM2EB1AL46 878 aaPredicted RBP6.84□□□□□ -1.32
LRIT3-201ENST00000327908 NUTM2AQ8IVF1 878 aaPredicted RBP6.84□□□□□ -1.32
LRIT3-201ENST00000327908 MRS2Q9HD23 443 aa6.84□□□□□ -1.32
LRIT3-201ENST00000327908 BCL9O00512 1426 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 TOM1L2Q6ZVM7 507 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 BABAM1Q9NWV8 329 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 LRP6O75581 1613 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 AFF2P51816 1311 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 WNK3Q9BYP7 1800 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 RGPD1P0DJD0 1748 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 ZC3H6P61129 1189 aaKnown RBP6.83□□□□□ -1.32
LRIT3-201ENST00000327908 SPATA31A5Q5VU36 1347 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 SPATA31A7Q8IWB4 1347 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 IL2RBP14784 551 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 IL13P35225 146 aa6.83□□□□□ -1.32
LRIT3-201ENST00000327908 PNISRQ8TF01 805 aaKnown RBP6.82□□□□□ -1.32
LRIT3-201ENST00000327908 RUNDC1Q96C34 613 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 BTG4Q9NY30 223 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 SOS1Q07889 1333 aaPredicted RBP6.82□□□□□ -1.32
LRIT3-201ENST00000327908 PCDH11XQ9BZA7 1347 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 PCDH11YQ9BZA8 1340 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 TNS2Q63HR2 1409 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 EIF4A2Q14240 407 aaKnown RBP6.82□□□□□ -1.32
LRIT3-201ENST00000327908 NUTM2GQ5VZR2 741 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 DDX17Q92841 729 aaKnown RBP6.82□□□□□ -1.32
LRIT3-201ENST00000327908 C8orf37Q96NL8 207 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 NLRP2Q9NX02 1062 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 SPATA31A1Q5TZJ5 1347 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 PEAK1Q9H792 1746 aa6.82□□□□□ -1.32
LRIT3-201ENST00000327908 FAM83GA6ND36 823 aa6.81□□□□□ -1.32
LRIT3-201ENST00000327908 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
LRIT3-201ENST00000327908 ADAMTS2O95450 1211 aa6.81□□□□□ -1.32
LRIT3-201ENST00000327908 C1orf141Q5JVX7 400 aa6.81□□□□□ -1.32
LRIT3-201ENST00000327908 PKD1L3Q7Z443 1732 aa6.81□□□□□ -1.32
LRIT3-201ENST00000327908 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
LRIT3-201ENST00000327908 EMILIN1Q9Y6C2 1016 aa6.81□□□□□ -1.32
LRIT3-201ENST00000327908 U2AF1L5P0DN76 240 aaPredicted RBP6.81□□□□□ -1.32
LRIT3-201ENST00000327908 U2AF1Q01081 240 aaKnown RBP eCLIP6.81□□□□□ -1.32
LRIT3-201ENST00000327908 DISP2A7MBM2 1401 aa6.81□□□□□ -1.32
LRIT3-201ENST00000327908 PDE3BQ13370 1112 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 RRS1Q15050 365 aaKnown RBP6.8□□□□□ -1.32
LRIT3-201ENST00000327908 CCDC27Q2M243 656 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 CCDC9Q9Y3X0 531 aaKnown RBP6.8□□□□□ -1.32
LRIT3-201ENST00000327908 THSD7AQ9UPZ6 1657 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 U2SURPO15042 1029 aaKnown RBP6.8□□□□□ -1.32
LRIT3-201ENST00000327908 RXRBP28702 533 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 GJD4Q96KN9 370 aaPredicted RBP6.8□□□□□ -1.32
LRIT3-201ENST00000327908 BCL9LQ86UU0 1499 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 IL16Q14005 1332 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 EXOC5O00471 708 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 ONECUT3O60422 494 aaPredicted RBP6.8□□□□□ -1.32
LRIT3-201ENST00000327908 RTF1Q92541 710 aaKnown RBP6.8□□□□□ -1.32
LRIT3-201ENST00000327908 ZRANB1Q9UGI0 708 aa6.8□□□□□ -1.32
LRIT3-201ENST00000327908 TNNT2P45379 298 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms