RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 PEAK1Q9H792 1746 aa9.13□□□□□ -0.95
LYSMD3-201ENST00000315948 AKAP12Q02952 1782 aa9.13□□□□□ -0.95
LYSMD3-201ENST00000315948 TSPYL6Q8N831 410 aa9.13□□□□□ -0.95
LYSMD3-201ENST00000315948 COG6Q9Y2V7 657 aa9.13□□□□□ -0.95
LYSMD3-201ENST00000315948 PSME1Q06323 249 aa9.12□□□□□ -0.95
LYSMD3-201ENST00000315948 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
LYSMD3-201ENST00000315948 NRKQ7Z2Y5 1582 aa9.12□□□□□ -0.95
LYSMD3-201ENST00000315948 RARSP54136 660 aaKnown RBP9.12□□□□□ -0.95
LYSMD3-201ENST00000315948 ZNF142P52746 1687 aaPredicted RBP9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 FCHSD2O94868 740 aa9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 AMPHP49418 695 aa9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 CHD2O14647 1828 aaKnown RBP9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 PIK3C2AO00443 1686 aa9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 LRRC59Q96AG4 307 aaKnown RBP9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 EYA1Q99502 592 aa9.11□□□□□ -0.95
LYSMD3-201ENST00000315948 ZNF335Q9H4Z2 1342 aaPredicted RBP9.1□□□□□ -0.95
LYSMD3-201ENST00000315948 AATKQ6ZMQ8 1374 aa9.1□□□□□ -0.95
LYSMD3-201ENST00000315948 ADGRL3Q9HAR2 1447 aa9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 CANXP27824 592 aaKnown RBP9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 SSH1Q8WYL5 1049 aa9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 RBM19Q9Y4C8 960 aaKnown RBP9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 CDK12Q9NYV4 1490 aaPredicted RBP9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 WDR63Q8IWG1 891 aa9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 PIK3R4Q99570 1358 aa9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 NFE2L2Q16236 605 aa9.09□□□□□ -0.95
LYSMD3-201ENST00000315948 HOXC9P31274 260 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 ZC3H6P61129 1189 aaKnown RBP9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 STRCP1A6NGW2 1772 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 USP31Q70CQ4 1352 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 AXIN2Q9Y2T1 843 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 CCDC27Q2M243 656 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 MBIPQ9NS73 344 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 FMN2Q9NZ56 1722 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 C8orf58Q8NAV2 365 aa9.08□□□□□ -0.96
LYSMD3-201ENST00000315948 IGHDP01880 384 aa9.07□□□□□ -0.96
LYSMD3-201ENST00000315948 SMC4Q9NTJ3 1288 aa9.07□□□□□ -0.96
LYSMD3-201ENST00000315948 NBPF6Q5VWK0 638 aa9.06□□□□□ -0.96
LYSMD3-201ENST00000315948 ERICH6BQ5W0A0 696 aa9.06□□□□□ -0.96
LYSMD3-201ENST00000315948 NBPF4Q96M43 638 aa9.06□□□□□ -0.96
LYSMD3-201ENST00000315948 TTC21AQ8NDW8 1320 aa9.06□□□□□ -0.96
LYSMD3-201ENST00000315948 C19orf44Q9H6X5 657 aa9.06□□□□□ -0.96
LYSMD3-201ENST00000315948 KRT28Q7Z3Y7 464 aa9.06□□□□□ -0.96
LYSMD3-201ENST00000315948 MYH16Q9H6N6 1097 aa9.06□□□□□ -0.96
LYSMD3-201ENST00000315948 CHRNA2Q15822 529 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 NOB1Q9ULX3 412 aaKnown RBP9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 ANKARQ7Z5J8 1434 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 MARF1Q9Y4F3 1742 aaKnown RBP9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 LMTK3Q96Q04 1460 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 FLT4P35916 1363 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 GCP02774 474 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 TRIM27P14373 513 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 ATF3P18847 181 aa9.05□□□□□ -0.96
LYSMD3-201ENST00000315948 C1orf167Q5SNV9 1468 aa9.04□□□□□ -0.96
LYSMD3-201ENST00000315948 PCDHB15Q9Y5E8 787 aa9.04□□□□□ -0.96
LYSMD3-201ENST00000315948 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
LYSMD3-201ENST00000315948 NEFMP07197 916 aa9.04□□□□□ -0.96
LYSMD3-201ENST00000315948 PELP1Q8IZL8 1130 aaKnown RBP9.04□□□□□ -0.96
LYSMD3-201ENST00000315948 BCL11AQ9H165 835 aa9.04□□□□□ -0.96
LYSMD3-201ENST00000315948 RGS3P49796 1198 aa9.03□□□□□ -0.96
LYSMD3-201ENST00000315948 GOLGB1Q14789 3259 aaKnown RBP9.03□□□□□ -0.96
LYSMD3-201ENST00000315948 DLG5Q8TDM6 1919 aa9.02□□□□□ -0.96
LYSMD3-201ENST00000315948 VAMP4O75379 141 aa9.02□□□□□ -0.97
LYSMD3-201ENST00000315948 C1orf115Q9H7X2 142 aa9.02□□□□□ -0.97
LYSMD3-201ENST00000315948 IGSF1Q8N6C5 1336 aa9.02□□□□□ -0.97
LYSMD3-201ENST00000315948 ZNF428Q96B54 188 aa9.02□□□□□ -0.97
LYSMD3-201ENST00000315948 LGR6Q9HBX8 967 aa9.02□□□□□ -0.97
LYSMD3-201ENST00000315948 MST1RQ04912 1400 aa9.01□□□□□ -0.97
LYSMD3-201ENST00000315948 ZNF853P0CG23 659 aa9.01□□□□□ -0.97
LYSMD3-201ENST00000315948 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
LYSMD3-201ENST00000315948 KDM2BQ8NHM5 1336 aa9.01□□□□□ -0.97
LYSMD3-201ENST00000315948 ITPRIPQ8IWB1 547 aa9.01□□□□□ -0.97
LYSMD3-201ENST00000315948 NGEFQ8N5V2 710 aa9.01□□□□□ -0.97
LYSMD3-201ENST00000315948 IL17REQ8NFR9 667 aa9.01□□□□□ -0.97
LYSMD3-201ENST00000315948 TWISTNBQ3B726 338 aaPredicted RBP9□□□□□ -0.97
LYSMD3-201ENST00000315948 GOLGA6L2Q8N9W4 650 aaPredicted RBP9□□□□□ -0.97
LYSMD3-201ENST00000315948 CFAP44Q96MT7 982 aa9□□□□□ -0.97
LYSMD3-201ENST00000315948 NWD1Q149M9 1564 aa9□□□□□ -0.97
LYSMD3-201ENST00000315948 BRINP3Q76B58 766 aa9□□□□□ -0.97
LYSMD3-201ENST00000315948 FTSJ3Q8IY81 847 aaKnown RBP9□□□□□ -0.97
LYSMD3-201ENST00000315948 KCNQ3O43525 872 aa9□□□□□ -0.97
LYSMD3-201ENST00000315948 ARHGEF25Q86VW2 580 aa9□□□□□ -0.97
LYSMD3-201ENST00000315948 IP6K1Q92551 441 aa9□□□□□ -0.97
LYSMD3-201ENST00000315948 STRCQ7RTU9 1775 aa9□□□□□ -0.97
LYSMD3-201ENST00000315948 PNNQ9H307 717 aaKnown RBP9□□□□□ -0.97
LYSMD3-201ENST00000315948 NFAT5O94916 1531 aa8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 MPRIPQ6WCQ1 1025 aa8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 ZKSCAN2Q63HK3 967 aa8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 ANKRD24Q8TF21 1146 aa8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 RGPD1P0DJD0 1748 aa8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 DZIP1LQ8IYY4 767 aaKnown RBP8.99□□□□□ -0.97
LYSMD3-201ENST00000315948 ATF7IPQ6VMQ6 1270 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 G2E3Q7L622 706 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 KDRP35968 1356 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 GNAI1P63096 354 aa8.98□□□□□ -0.97
LYSMD3-201ENST00000315948 MSH5O43196 834 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms