RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 ERO1AQ96HE7 468 aa9.23□□□□□ -0.93
RSF1-201ENST00000308488 BIRC2Q13490 618 aa9.23□□□□□ -0.93
RSF1-201ENST00000308488 ZSCAN23Q3MJ62 389 aa9.23□□□□□ -0.93
RSF1-201ENST00000308488 COG6Q9Y2V7 657 aa9.23□□□□□ -0.93
RSF1-201ENST00000308488 ZKSCAN8Q15776 578 aaPredicted RBP9.23□□□□□ -0.93
RSF1-201ENST00000308488 PDILTQ8N807 584 aa9.23□□□□□ -0.93
RSF1-201ENST00000308488 PLEKHH2Q8IVE3 1493 aa9.23□□□□□ -0.93
RSF1-201ENST00000308488 TACO1Q9BSH4 297 aaKnown RBP9.23□□□□□ -0.93
RSF1-201ENST00000308488 NBPF8Q3BBV2 869 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 CEP57L1Q8IYX8 460 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 SLU7O95391 586 aaKnown RBP9.22□□□□□ -0.93
RSF1-201ENST00000308488 ADCY5O95622 1261 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 WWC2Q6AWC2 1192 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 KIF5BP33176 963 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 MCTP2Q6DN12 878 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 CCDC121Q6ZUS5 278 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 OTUD6BQ8N6M0 293 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 GOLGA5Q8TBA6 731 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 PDE3AQ14432 1141 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 FIBPO43427 364 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 TUBBP07437 444 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 ANAPC15P60006 121 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 MAP3K11Q16584 847 aa9.22□□□□□ -0.93
RSF1-201ENST00000308488 SNW1Q13573 536 aaKnown RBP9.21□□□□□ -0.93
RSF1-201ENST00000308488 ZSCAN26Q16670 478 aa9.21□□□□□ -0.93
RSF1-201ENST00000308488 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.93
RSF1-201ENST00000308488 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.93
RSF1-201ENST00000308488 FMN1Q68DA7 1419 aa9.21□□□□□ -0.93
RSF1-201ENST00000308488 VPS37CA5D8V6 355 aaPredicted RBP9.21□□□□□ -0.93
RSF1-201ENST00000308488 SOX12O15370 315 aa9.21□□□□□ -0.93
RSF1-201ENST00000308488 ANKRD45Q5TZF3 282 aa9.21□□□□□ -0.93
RSF1-201ENST00000308488 ROCK1Q13464 1354 aa9.21□□□□□ -0.94
RSF1-201ENST00000308488 APBB1O00213 710 aa9.21□□□□□ -0.94
RSF1-201ENST00000308488 WHAMMP3Q1A5X7 153 aa9.21□□□□□ -0.94
RSF1-201ENST00000308488 GIGYF2Q6Y7W6 1299 aaKnown RBP9.21□□□□□ -0.94
RSF1-201ENST00000308488 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 SPAG9O60271 1321 aaKnown RBP9.2□□□□□ -0.94
RSF1-201ENST00000308488 INPP5BP32019 993 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 ODF2Q5BJF6 829 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 LOC102724159A0A0B4J2E5 919 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 PWP2Q15269 919 aaKnown RBP9.2□□□□□ -0.94
RSF1-201ENST00000308488 SYCP1Q15431 976 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 SCLT1Q96NL6 688 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 IRX1P78414 480 aaPredicted RBP9.2□□□□□ -0.94
RSF1-201ENST00000308488 U2AF2P26368 475 aaKnown RBP eCLIP9.2□□□□□ -0.94
RSF1-201ENST00000308488 ANKRD18BA2A2Z9 1011 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 CCDC175P0C221 793 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 CCDC148Q8NFR7 591 aa9.2□□□□□ -0.94
RSF1-201ENST00000308488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.2□□□□□ -0.94
RSF1-201ENST00000308488 ZMAT2Q96NC0 199 aaKnown RBP9.19□□□□□ -0.94
RSF1-201ENST00000308488 TXLNAP40222 546 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 SPECC1LQ69YQ0 1117 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 A6NNZ2 444 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 KIF3BO15066 747 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 TUBB8Q3ZCM7 444 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 LMNTD2Q8IXW0 634 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
RSF1-201ENST00000308488 USP25Q9UHP3 1055 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 ARHGAP25P42331 645 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 BAG4O95429 457 aaKnown RBP9.19□□□□□ -0.94
RSF1-201ENST00000308488 NUP62CLQ9H1M0 184 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 ZNF365Q70YC5 407 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 CCDC150Q8NCX0 1101 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 PPFIBP1Q86W92 1011 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 HDXQ7Z353 690 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 TBC1D32Q96NH3 1257 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 BCL2L12Q9HB09 334 aa9.19□□□□□ -0.94
RSF1-201ENST00000308488 RLBP1P12271 317 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 CTCFLQ8NI51 663 aaPredicted RBP9.18□□□□□ -0.94
RSF1-201ENST00000308488 WDR97A6NE52 1622 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 RUFY2Q8WXA3 655 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 GTF3C6Q969F1 213 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 SDF4Q9BRK5 362 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 ZNF777Q9ULD5 760 aaPredicted RBP9.18□□□□□ -0.94
RSF1-201ENST00000308488 ZKSCAN1P17029 563 aaPredicted RBP9.18□□□□□ -0.94
RSF1-201ENST00000308488 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
RSF1-201ENST00000308488 CEP89Q96ST8 783 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 MMS22LQ6ZRQ5 1243 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 DZIP1LQ8IYY4 767 aaKnown RBP9.18□□□□□ -0.94
RSF1-201ENST00000308488 FSD2A1L4K1 749 aa9.18□□□□□ -0.94
RSF1-201ENST00000308488 KLHL10Q6JEL2 608 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 MORC1Q86VD1 984 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 TTC36A6NLP5 189 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 PIK3R5Q8WYR1 880 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 TRIM4Q9C037 500 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 CCDC83Q8IWF9 413 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 ZBTB17Q13105 803 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 GOLGA1Q92805 767 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 CLIP2Q9UDT6 1046 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 ABCC9O60706 1549 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 SSFA2P28290 1259 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 CCDC92Q53HC0 331 aaPredicted RBP9.17□□□□□ -0.94
RSF1-201ENST00000308488 PPP1R9BQ96SB3 815 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 DHX29Q7Z478 1369 aaKnown RBP9.17□□□□□ -0.94
RSF1-201ENST00000308488 IRAK4Q9NWZ3 460 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 SLC8A1P32418 973 aa9.17□□□□□ -0.94
RSF1-201ENST00000308488 KIF5CO60282 957 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms