RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 OVOS2A0A0J9YW53 1432 aa29.02■■■□□ 2.24
MRPL39-201ENST00000307301 OVOS2Q6IE36 1432 aa29.02■■■□□ 2.24
MRPL39-201ENST00000307301 USP35Q9P2H5 1018 aa29■■■□□ 2.23
MRPL39-201ENST00000307301 AXIN2Q9Y2T1 843 aa28.99■■■□□ 2.23
MRPL39-201ENST00000307301 KIF20BQ96Q89 1820 aa28.98■■■□□ 2.23
MRPL39-201ENST00000307301 KRT27Q7Z3Y8 459 aa28.97■■■□□ 2.23
MRPL39-201ENST00000307301 ABCC6O95255 1503 aa28.96■■■□□ 2.23
MRPL39-201ENST00000307301 CRB1P82279 1406 aa28.95■■■□□ 2.23
MRPL39-201ENST00000307301 EP400Q96L91 3159 aa28.95■■■□□ 2.23
MRPL39-201ENST00000307301 POLR3GLQ9BT43 218 aa28.94■■■□□ 2.22
MRPL39-201ENST00000307301 TCP11L2Q8N4U5 519 aa28.93■■■□□ 2.22
MRPL39-201ENST00000307301 BARGINQ6ZT62 677 aa28.92■■■□□ 2.22
MRPL39-201ENST00000307301 COG3Q96JB2 828 aa28.92■■■□□ 2.22
MRPL39-201ENST00000307301 WDR17Q8IZU2 1322 aa28.91■■■□□ 2.22
MRPL39-201ENST00000307301 WNK3Q9BYP7 1800 aa28.9■■■□□ 2.22
MRPL39-201ENST00000307301 CARD14Q9BXL6 1004 aa28.9■■■□□ 2.22
MRPL39-201ENST00000307301 FYB1O15117 783 aa28.89■■■□□ 2.22
MRPL39-201ENST00000307301 TOM1L2Q6ZVM7 507 aa28.89■■■□□ 2.22
MRPL39-201ENST00000307301 THRAP3Q9Y2W1 955 aaKnown RBP28.89■■■□□ 2.22
MRPL39-201ENST00000307301 PARP4Q9UKK3 1724 aaKnown RBP28.89■■■□□ 2.21
MRPL39-201ENST00000307301 NSD3Q9BZ95 1437 aa28.88■■■□□ 2.21
MRPL39-201ENST00000307301 GGNBP2Q9H3C7 697 aa28.88■■■□□ 2.21
MRPL39-201ENST00000307301 FAM182BQ5T319 152 aa28.86■■■□□ 2.21
MRPL39-201ENST00000307301 CSB-PGBD3P0DP91 1061 aa28.85■■■□□ 2.21
MRPL39-201ENST00000307301 C11orf95C9JLR9 678 aaPredicted RBP28.84■■■□□ 2.21
MRPL39-201ENST00000307301 CCDC125Q86Z20 511 aa28.84■■■□□ 2.21
MRPL39-201ENST00000307301 BLMP54132 1417 aaPredicted RBP28.84■■■□□ 2.21
MRPL39-201ENST00000307301 FBLN1P23142 703 aa28.83■■■□□ 2.21
MRPL39-201ENST00000307301 LRRC37A3O60309 1634 aa28.82■■■□□ 2.2
MRPL39-201ENST00000307301 ERBB3P21860 1342 aa28.81■■■□□ 2.2
MRPL39-201ENST00000307301 MAP3K19Q56UN5 1328 aa28.8■■■□□ 2.2
MRPL39-201ENST00000307301 CARD10Q9BWT7 1032 aa28.8■■■□□ 2.2
MRPL39-201ENST00000307301 RGPD1P0DJD0 1748 aa28.78■■■□□ 2.2
MRPL39-201ENST00000307301 PDE3BQ13370 1112 aa28.78■■■□□ 2.2
MRPL39-201ENST00000307301 ANKRD24Q8TF21 1146 aa28.78■■■□□ 2.2
MRPL39-201ENST00000307301 IP6K1Q92551 441 aa28.78■■■□□ 2.2
MRPL39-201ENST00000307301 FAM208AQ9UK61 1670 aaKnown RBP28.77■■■□□ 2.2
MRPL39-201ENST00000307301 ANKRD26Q9UPS8 1709 aa28.76■■■□□ 2.19
MRPL39-201ENST00000307301 CCDC7Q96M83 1385 aa28.75■■■□□ 2.19
MRPL39-201ENST00000307301 AMPHP49418 695 aa28.75■■■□□ 2.19
MRPL39-201ENST00000307301 RRS1Q15050 365 aaKnown RBP28.75■■■□□ 2.19
MRPL39-201ENST00000307301 TNS1Q9HBL0 1735 aaKnown RBP28.74■■■□□ 2.19
MRPL39-201ENST00000307301 CGNL1Q0VF96 1302 aa28.74■■■□□ 2.19
MRPL39-201ENST00000307301 HOXC9P31274 260 aa28.74■■■□□ 2.19
MRPL39-201ENST00000307301 SF3B2Q13435 895 aaKnown RBP28.74■■■□□ 2.19
MRPL39-201ENST00000307301 PANK3Q9H999 370 aa28.74■■■□□ 2.19
MRPL39-201ENST00000307301 NLRP2Q9NX02 1062 aa28.74■■■□□ 2.19
MRPL39-201ENST00000307301 DISP2A7MBM2 1401 aa28.74■■■□□ 2.19
MRPL39-201ENST00000307301 RGPD2P0DJD1 1756 aa28.73■■■□□ 2.19
MRPL39-201ENST00000307301 PEAK1Q9H792 1746 aa28.72■■■□□ 2.19
MRPL39-201ENST00000307301 FAM196AQ6ZSG2 479 aa28.72■■■□□ 2.19
MRPL39-201ENST00000307301 RTL1A6NKG5 1358 aa28.72■■■□□ 2.19
MRPL39-201ENST00000307301 KIF7Q2M1P5 1343 aa28.71■■■□□ 2.19
MRPL39-201ENST00000307301 DDB1Q16531 1140 aa28.71■■■□□ 2.19
MRPL39-201ENST00000307301 DEFB132Q7Z7B7 95 aa28.71■■■□□ 2.19
MRPL39-201ENST00000307301 LTV1Q96GA3 475 aaPredicted RBP28.71■■■□□ 2.19
MRPL39-201ENST00000307301 CDCA7Q9BWT1 371 aaPredicted RBP28.71■■■□□ 2.19
MRPL39-201ENST00000307301 MAP2P11137 1827 aaKnown RBP28.69■■■□□ 2.18
MRPL39-201ENST00000307301 SBF2Q86WG5 1849 aa28.66■■■□□ 2.18
MRPL39-201ENST00000307301 TRIM37O94972 964 aa28.65■■■□□ 2.18
MRPL39-201ENST00000307301 OVOS2A0A0G2JMS6 1433 aa28.65■■■□□ 2.18
MRPL39-201ENST00000307301 FLT4P35916 1363 aa28.63■■■□□ 2.17
MRPL39-201ENST00000307301 TNS2Q63HR2 1409 aa28.63■■■□□ 2.17
MRPL39-201ENST00000307301 BAG6P46379 1132 aa28.63■■■□□ 2.17
MRPL39-201ENST00000307301 EMILIN1Q9Y6C2 1016 aa28.63■■■□□ 2.17
MRPL39-201ENST00000307301 IL2RBP14784 551 aa28.62■■■□□ 2.17
MRPL39-201ENST00000307301 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
MRPL39-201ENST00000307301 KIF24Q5T7B8 1368 aa28.62■■■□□ 2.17
MRPL39-201ENST00000307301 EXOC5O00471 708 aa28.61■■■□□ 2.17
MRPL39-201ENST00000307301 INSRP06213 1382 aa28.61■■■□□ 2.17
MRPL39-201ENST00000307301 HSP90AB2PQ58FF8 381 aa28.6■■■□□ 2.17
MRPL39-201ENST00000307301 SMG6Q86US8 1419 aaKnown RBP28.59■■■□□ 2.17
MRPL39-201ENST00000307301 EN1Q05925 392 aaPredicted RBP28.58■■■□□ 2.17
MRPL39-201ENST00000307301 NSD2O96028 1365 aa28.58■■■□□ 2.17
MRPL39-201ENST00000307301 PPM1GO15355 546 aaPredicted RBP28.57■■■□□ 2.16
MRPL39-201ENST00000307301 TNNT2P45379 298 aaPredicted RBP28.57■■■□□ 2.16
MRPL39-201ENST00000307301 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
MRPL39-201ENST00000307301 WASHC2AQ641Q2 1341 aa28.55■■■□□ 2.16
MRPL39-201ENST00000307301 APBA3O96018 575 aa28.55■■■□□ 2.16
MRPL39-201ENST00000307301 NBPF6Q5VWK0 638 aa28.55■■■□□ 2.16
MRPL39-201ENST00000307301 NBPF4Q96M43 638 aa28.55■■■□□ 2.16
MRPL39-201ENST00000307301 POLKQ9UBT6 870 aa28.54■■■□□ 2.16
MRPL39-201ENST00000307301 BCL9O00512 1426 aa28.53■■■□□ 2.16
MRPL39-201ENST00000307301 USHBP1Q8N6Y0 703 aa28.53■■■□□ 2.16
MRPL39-201ENST00000307301 SHANK3Q9BYB0 1731 aa28.52■■■□□ 2.16
MRPL39-201ENST00000307301 MEGF6O75095 1541 aa28.51■■■□□ 2.15
MRPL39-201ENST00000307301 EZH2Q15910 746 aaKnown RBP28.5■■■□□ 2.15
MRPL39-201ENST00000307301 MORC1Q86VD1 984 aa28.5■■■□□ 2.15
MRPL39-201ENST00000307301 RREB1Q92766 1687 aa28.49■■■□□ 2.15
MRPL39-201ENST00000307301 AMER1Q5JTC6 1135 aaPredicted RBP28.49■■■□□ 2.15
MRPL39-201ENST00000307301 CAMKK2Q96RR4 588 aa28.49■■■□□ 2.15
MRPL39-201ENST00000307301 PTF1AQ7RTS3 328 aa28.48■■■□□ 2.15
MRPL39-201ENST00000307301 NHSQ6T4R5 1651 aa28.48■■■□□ 2.15
MRPL39-201ENST00000307301 PER1O15534 1290 aaPredicted RBP28.47■■■□□ 2.15
MRPL39-201ENST00000307301 BCL11BQ9C0K0 894 aaPredicted RBP28.46■■■□□ 2.15
MRPL39-201ENST00000307301 RGPD3A6NKT7 1758 aaPredicted RBP28.46■■■□□ 2.15
MRPL39-201ENST00000307301 RGPD4Q7Z3J3 1758 aa28.46■■■□□ 2.15
MRPL39-201ENST00000307301 NUP188Q5SRE5 1749 aa28.45■■■□□ 2.14
MRPL39-201ENST00000307301 DDX54Q8TDD1 881 aaKnown RBP28.44■■■□□ 2.14
MRPL39-201ENST00000307301 PARD3Q8TEW0 1356 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms