RNA–Protein interactions for RNA: ENST00000303757.12

LST1-202, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-202ENST00000303757 ARHGEF28Q8N1W1 1705 aaKnown RBP23.13■■□□□ 1.29
LST1-202ENST00000303757 LARP1Q6PKG0 1096 aaKnown RBP23.13■■□□□ 1.29
LST1-202ENST00000303757 MIER1Q8N108 512 aa23.13■■□□□ 1.29
LST1-202ENST00000303757 DCAF11Q8TEB1 546 aa23.13■■□□□ 1.29
LST1-202ENST00000303757 CAMTA1Q9Y6Y1 1673 aa23.12■■□□□ 1.29
LST1-202ENST00000303757 BARGINQ6ZT62 677 aa23.11■■□□□ 1.29
LST1-202ENST00000303757 NRKQ7Z2Y5 1582 aa23.1■■□□□ 1.29
LST1-202ENST00000303757 SPON1Q9HCB6 807 aa23.09■■□□□ 1.29
LST1-202ENST00000303757 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
LST1-202ENST00000303757 CDK19Q9BWU1 502 aa23.08■■□□□ 1.29
LST1-202ENST00000303757 ACEP12821 1306 aa23.08■■□□□ 1.28
LST1-202ENST00000303757 KCNQ2O43526 872 aa23.07■■□□□ 1.28
LST1-202ENST00000303757 TOPAZ1Q8N9V7 1692 aa23.06■■□□□ 1.28
LST1-202ENST00000303757 LMO7Q8WWI1 1683 aa23.06■■□□□ 1.28
LST1-202ENST00000303757 HAX1O00165 279 aa23.06■■□□□ 1.28
LST1-202ENST00000303757 PLCD3Q8N3E9 789 aa23.06■■□□□ 1.28
LST1-202ENST00000303757 ZBTB7CA1YPR0 619 aa23.05■■□□□ 1.28
LST1-202ENST00000303757 ABTB2Q8N961 1025 aa23.05■■□□□ 1.28
LST1-202ENST00000303757 VASPP50552 380 aaPredicted RBP23.04■■□□□ 1.28
LST1-202ENST00000303757 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
LST1-202ENST00000303757 SBF2Q86WG5 1849 aa23.03■■□□□ 1.28
LST1-202ENST00000303757 POLR3AO14802 1390 aaPredicted RBP23.01■■□□□ 1.27
LST1-202ENST00000303757 C19orf67A6NJJ6 358 aa23.01■■□□□ 1.27
LST1-202ENST00000303757 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
LST1-202ENST00000303757 NINLQ9Y2I6 1382 aa23■■□□□ 1.27
LST1-202ENST00000303757 PTF1AQ7RTS3 328 aa22.99■■□□□ 1.27
LST1-202ENST00000303757 PDGFDQ9GZP0 370 aaPredicted RBP22.99■■□□□ 1.27
LST1-202ENST00000303757 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
LST1-202ENST00000303757 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
LST1-202ENST00000303757 CPDO75976 1380 aa22.99■■□□□ 1.27
LST1-202ENST00000303757 PEAK1Q9H792 1746 aa22.99■■□□□ 1.27
LST1-202ENST00000303757 COL5A2P05997 1499 aaPredicted RBP22.98■■□□□ 1.27
LST1-202ENST00000303757 THRAP3Q9Y2W1 955 aaKnown RBP22.98■■□□□ 1.27
LST1-202ENST00000303757 USP19O94966 1318 aa22.98■■□□□ 1.27
LST1-202ENST00000303757 CASZ1Q86V15 1759 aa22.97■■□□□ 1.27
LST1-202ENST00000303757 GCP02774 474 aa22.97■■□□□ 1.27
LST1-202ENST00000303757 LRRC37A3O60309 1634 aa22.97■■□□□ 1.27
LST1-202ENST00000303757 OVOS2A0A0G2JMS6 1433 aa22.96■■□□□ 1.27
LST1-202ENST00000303757 OVOS2A0A0J9YW53 1432 aa22.96■■□□□ 1.27
LST1-202ENST00000303757 OVOS2Q6IE36 1432 aa22.96■■□□□ 1.27
LST1-202ENST00000303757 PLEKHG3A1L390 1219 aa22.95■■□□□ 1.26
LST1-202ENST00000303757 NLRP13Q86W25 1043 aa22.95■■□□□ 1.26
LST1-202ENST00000303757 CRB1P82279 1406 aa22.94■■□□□ 1.26
LST1-202ENST00000303757 ZBTB7AO95365 584 aa22.94■■□□□ 1.26
LST1-202ENST00000303757 EVX2Q03828 476 aa22.94■■□□□ 1.26
LST1-202ENST00000303757 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
LST1-202ENST00000303757 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
LST1-202ENST00000303757 MYOM1P52179 1685 aa22.93■■□□□ 1.26
LST1-202ENST00000303757 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
LST1-202ENST00000303757 PPIP5K1Q6PFW1 1433 aa22.91■■□□□ 1.26
LST1-202ENST00000303757 SRPK2P78362 688 aaKnown RBP22.91■■□□□ 1.26
LST1-202ENST00000303757 DDB1Q16531 1140 aa22.91■■□□□ 1.26
LST1-202ENST00000303757 WNK3Q9BYP7 1800 aa22.9■■□□□ 1.26
LST1-202ENST00000303757 PLSCR1O15162 318 aa22.9■■□□□ 1.26
LST1-202ENST00000303757 TOM1L2Q6ZVM7 507 aa22.9■■□□□ 1.26
LST1-202ENST00000303757 AKAP12Q02952 1782 aa22.9■■□□□ 1.26
LST1-202ENST00000303757 CABP2Q9NPB3 220 aa22.89■■□□□ 1.25
LST1-202ENST00000303757 NLRP6P59044 892 aa22.88■■□□□ 1.25
LST1-202ENST00000303757 RGPD5Q99666 1765 aa22.88■■□□□ 1.25
LST1-202ENST00000303757 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
LST1-202ENST00000303757 MARCH10Q8NA82 808 aaPredicted RBP22.87■■□□□ 1.25
LST1-202ENST00000303757 STAC3Q96MF2 364 aa22.87■■□□□ 1.25
LST1-202ENST00000303757 NBPF1Q3BBV0 1214 aa22.86■■□□□ 1.25
LST1-202ENST00000303757 ZNF784Q8NCA9 323 aaPredicted RBP22.86■■□□□ 1.25
LST1-202ENST00000303757 COL18A1P39060 1754 aa22.86■■□□□ 1.25
LST1-202ENST00000303757 CD44P16070 742 aaKnown RBP22.85■■□□□ 1.25
LST1-202ENST00000303757 PTGER2P43116 358 aa22.85■■□□□ 1.25
LST1-202ENST00000303757 AXIN2Q9Y2T1 843 aa22.84■■□□□ 1.25
LST1-202ENST00000303757 AATKQ6ZMQ8 1374 aa22.84■■□□□ 1.25
LST1-202ENST00000303757 KIAA1210Q9ULL0 1709 aa22.83■■□□□ 1.25
LST1-202ENST00000303757 SLIT3O75094 1523 aa22.82■■□□□ 1.24
LST1-202ENST00000303757 SOX12O15370 315 aa22.82■■□□□ 1.24
LST1-202ENST00000303757 FHDC1Q9C0D6 1143 aaPredicted RBP22.82■■□□□ 1.24
LST1-202ENST00000303757 STK32BQ9NY57 414 aa22.82■■□□□ 1.24
LST1-202ENST00000303757 CABP1Q9NZU7 370 aa22.82■■□□□ 1.24
LST1-202ENST00000303757 ZBTB47Q9UFB7 747 aaPredicted RBP22.82■■□□□ 1.24
LST1-202ENST00000303757 PIK3C2AO00443 1686 aa22.81■■□□□ 1.24
LST1-202ENST00000303757 CHD4Q14839 1912 aa22.81■■□□□ 1.24
LST1-202ENST00000303757 TXNRD1Q16881 649 aa22.81■■□□□ 1.24
LST1-202ENST00000303757 USP6P35125 1406 aa22.81■■□□□ 1.24
LST1-202ENST00000303757 QRICH2Q9H0J4 1663 aa22.81■■□□□ 1.24
LST1-202ENST00000303757 WDR17Q8IZU2 1322 aa22.8■■□□□ 1.24
LST1-202ENST00000303757 SYT17Q9BSW7 474 aa22.79■■□□□ 1.24
LST1-202ENST00000303757 CENPJQ9HC77 1338 aaPredicted RBP22.79■■□□□ 1.24
LST1-202ENST00000303757 CSB-PGBD3P0DP91 1061 aa22.78■■□□□ 1.24
LST1-202ENST00000303757 SLC15A2Q16348 729 aa22.78■■□□□ 1.24
LST1-202ENST00000303757 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.24
LST1-202ENST00000303757 KAT6BQ8WYB5 2073 aa22.76■■□□□ 1.23
LST1-202ENST00000303757 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
LST1-202ENST00000303757 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
LST1-202ENST00000303757 SP7Q8TDD2 431 aaPredicted RBP22.74■■□□□ 1.23
LST1-202ENST00000303757 EXOC5O00471 708 aa22.73■■□□□ 1.23
LST1-202ENST00000303757 ACSBG1Q96GR2 724 aa22.73■■□□□ 1.23
LST1-202ENST00000303757 CDCA7Q9BWT1 371 aaPredicted RBP22.73■■□□□ 1.23
LST1-202ENST00000303757 IFNLR1Q8IU57 520 aaPredicted RBP22.72■■□□□ 1.23
LST1-202ENST00000303757 MTFR1LQ9H019 292 aa22.72■■□□□ 1.23
LST1-202ENST00000303757 BCL9O00512 1426 aa22.72■■□□□ 1.23
LST1-202ENST00000303757 ARHGEF25Q86VW2 580 aa22.71■■□□□ 1.23
LST1-202ENST00000303757 CARD10Q9BWT7 1032 aa22.71■■□□□ 1.23
LST1-202ENST00000303757 SGIP1Q9BQI5 828 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms