RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 MCM10Q7L590 875 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 SSH1Q8WYL5 1049 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 POGZQ7Z3K3 1410 aa19.64■□□□□ 0.73
BRD3-201ENST00000303407 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
BRD3-201ENST00000303407 CABP4P57796 275 aa19.63■□□□□ 0.73
BRD3-201ENST00000303407 CCAR2Q8N163 923 aaKnown RBP19.63■□□□□ 0.73
BRD3-201ENST00000303407 ALDH1L2Q3SY69 923 aa19.63■□□□□ 0.73
BRD3-201ENST00000303407 DUSP27Q5VZP5 1158 aa19.63■□□□□ 0.73
BRD3-201ENST00000303407 NME9Q86XW9 330 aa19.63■□□□□ 0.73
BRD3-201ENST00000303407 MIS18AQ9NYP9 233 aa19.63■□□□□ 0.73
BRD3-201ENST00000303407 LRPPRCP42704 1394 aaKnown RBP19.63■□□□□ 0.73
BRD3-201ENST00000303407 LETM1O95202 739 aaPredicted RBP19.63■□□□□ 0.73
BRD3-201ENST00000303407 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
BRD3-201ENST00000303407 RBM42Q9BTD8 480 aaKnown RBP19.63■□□□□ 0.73
BRD3-201ENST00000303407 FYB1O15117 783 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 MYL6BP14649 208 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 RPAP2Q8IXW5 612 aaPredicted RBP19.62■□□□□ 0.73
BRD3-201ENST00000303407 SPG7Q9UQ90 795 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 TSPY26PQ9H489 355 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 TRIM34Q9BYJ4 488 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 BRPF3Q9ULD4 1205 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 ATP10BO94823 1461 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
BRD3-201ENST00000303407 DHX16O60231 1041 aaKnown RBP19.61■□□□□ 0.73
BRD3-201ENST00000303407 TTC39AQ5SRH9 613 aa19.61■□□□□ 0.73
BRD3-201ENST00000303407 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
BRD3-201ENST00000303407 DHX29Q7Z478 1369 aaKnown RBP19.6■□□□□ 0.73
BRD3-201ENST00000303407 KDM4AO75164 1064 aa19.6■□□□□ 0.73
BRD3-201ENST00000303407 MEX3CQ5U5Q3 659 aaKnown RBP19.6■□□□□ 0.73
BRD3-201ENST00000303407 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
BRD3-201ENST00000303407 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
BRD3-201ENST00000303407 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
BRD3-201ENST00000303407 SYCP2Q9BX26 1530 aa19.6■□□□□ 0.73
BRD3-201ENST00000303407 A0A0U1RQG5 324 aaPredicted RBP19.6■□□□□ 0.73
BRD3-201ENST00000303407 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
BRD3-201ENST00000303407 C14orf93Q9H972 538 aaKnown RBP19.6■□□□□ 0.73
BRD3-201ENST00000303407 KIAA0556O60303 1618 aa19.6■□□□□ 0.73
BRD3-201ENST00000303407 CCDC47Q96A33 483 aaKnown RBP19.6■□□□□ 0.73
BRD3-201ENST00000303407 NSD2O96028 1365 aa19.6■□□□□ 0.73
BRD3-201ENST00000303407 EMILIN1Q9Y6C2 1016 aa19.59■□□□□ 0.73
BRD3-201ENST00000303407 FAM177BA6PVY3 158 aa19.59■□□□□ 0.73
BRD3-201ENST00000303407 ANKRD20A12PQ8NF67 263 aa19.59■□□□□ 0.73
BRD3-201ENST00000303407 RBM33Q96EV2 1170 aaKnown RBP19.59■□□□□ 0.73
BRD3-201ENST00000303407 PCMTD1Q96MG8 357 aaPredicted RBP19.59■□□□□ 0.73
BRD3-201ENST00000303407 IDI1Q13907 227 aa19.59■□□□□ 0.73
BRD3-201ENST00000303407 KDM5BQ9UGL1 1544 aa19.59■□□□□ 0.73
BRD3-201ENST00000303407 ADAMTS12P58397 1594 aa19.58■□□□□ 0.73
BRD3-201ENST00000303407 AACSQ86V21 672 aa19.58■□□□□ 0.73
BRD3-201ENST00000303407 WDR62O43379 1518 aa19.58■□□□□ 0.73
BRD3-201ENST00000303407 FIBPO43427 364 aa19.58■□□□□ 0.72
BRD3-201ENST00000303407 HOMER1Q86YM7 354 aa19.58■□□□□ 0.72
BRD3-201ENST00000303407 PDCP20941 246 aa19.58■□□□□ 0.72
BRD3-201ENST00000303407 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.72
BRD3-201ENST00000303407 CCDC158Q5M9N0 1113 aa19.58■□□□□ 0.72
BRD3-201ENST00000303407 IL1RAPL2Q9NP60 686 aa19.57■□□□□ 0.72
BRD3-201ENST00000303407 NAT10Q9H0A0 1025 aaKnown RBP19.57■□□□□ 0.72
BRD3-201ENST00000303407 FAM13BQ9NYF5 915 aa19.56■□□□□ 0.72
BRD3-201ENST00000303407 WASLO00401 505 aaPredicted RBP19.56■□□□□ 0.72
BRD3-201ENST00000303407 TOM1L2Q6ZVM7 507 aa19.56■□□□□ 0.72
BRD3-201ENST00000303407 DENND4BO75064 1496 aaPredicted RBP19.56■□□□□ 0.72
BRD3-201ENST00000303407 PDE4CQ08493 712 aa19.56■□□□□ 0.72
BRD3-201ENST00000303407 STK3Q13188 491 aa19.56■□□□□ 0.72
BRD3-201ENST00000303407 PRAG1Q86YV5 1406 aa19.56■□□□□ 0.72
BRD3-201ENST00000303407 CNNM1Q9NRU3 951 aa19.56■□□□□ 0.72
BRD3-201ENST00000303407 CCDC173Q0VFZ6 552 aa19.55■□□□□ 0.72
BRD3-201ENST00000303407 SMARCA5O60264 1052 aaPredicted RBP19.55■□□□□ 0.72
BRD3-201ENST00000303407 AEBP1Q8IUX7 1158 aa19.55■□□□□ 0.72
BRD3-201ENST00000303407 SDF4Q9BRK5 362 aa19.55■□□□□ 0.72
BRD3-201ENST00000303407 PLCH2O75038 1416 aa19.55■□□□□ 0.72
BRD3-201ENST00000303407 DDX54Q8TDD1 881 aaKnown RBP19.54■□□□□ 0.72
BRD3-201ENST00000303407 BRMS1Q9HCU9 246 aa19.54■□□□□ 0.72
BRD3-201ENST00000303407 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
BRD3-201ENST00000303407 CWC27Q6UX04 472 aaKnown RBP19.54■□□□□ 0.72
BRD3-201ENST00000303407 OLFM4Q6UX06 510 aa19.54■□□□□ 0.72
BRD3-201ENST00000303407 NUTM1Q86Y26 1132 aa19.54■□□□□ 0.72
BRD3-201ENST00000303407 WDR33Q9C0J8 1336 aaKnown RBP19.54■□□□□ 0.72
BRD3-201ENST00000303407 ANKRD1Q15327 319 aa19.54■□□□□ 0.72
BRD3-201ENST00000303407 EXOC6BQ9Y2D4 811 aa19.54■□□□□ 0.72
BRD3-201ENST00000303407 SART3Q15020 963 aaKnown RBP19.53■□□□□ 0.72
BRD3-201ENST00000303407 CIZ1Q9ULV3 898 aaPredicted RBP19.53■□□□□ 0.72
BRD3-201ENST00000303407 TRIM27P14373 513 aa19.53■□□□□ 0.72
BRD3-201ENST00000303407 XBP1P17861 261 aa19.53■□□□□ 0.72
BRD3-201ENST00000303407 R3HCC1Q9Y3T6 440 aaKnown RBP19.53■□□□□ 0.72
BRD3-201ENST00000303407 MCM4P33991 863 aa19.52■□□□□ 0.72
BRD3-201ENST00000303407 NUP160Q12769 1436 aa19.52■□□□□ 0.72
BRD3-201ENST00000303407 ZNF396Q96N95 335 aaPredicted RBP19.52■□□□□ 0.72
BRD3-201ENST00000303407 CEBPZQ03701 1054 aaKnown RBP19.52■□□□□ 0.71
BRD3-201ENST00000303407 PDRG1Q9NUG6 133 aa19.52■□□□□ 0.71
BRD3-201ENST00000303407 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
BRD3-201ENST00000303407 CEP89Q96ST8 783 aa19.51■□□□□ 0.71
BRD3-201ENST00000303407 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.51■□□□□ 0.71
BRD3-201ENST00000303407 EIF2AK4Q9P2K8 1649 aaKnown RBP19.51■□□□□ 0.71
BRD3-201ENST00000303407 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
BRD3-201ENST00000303407 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
BRD3-201ENST00000303407 GRPEL1Q9HAV7 217 aa19.51■□□□□ 0.71
BRD3-201ENST00000303407 IPO7O95373 1038 aaKnown RBP19.51■□□□□ 0.71
BRD3-201ENST00000303407 ANKRD36BQ8N2N9 1353 aa19.5■□□□□ 0.71
BRD3-201ENST00000303407 USHBP1Q8N6Y0 703 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms