RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TTC39AQ5SRH9 613 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 NINLQ9Y2I6 1382 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 WASHC2AQ641Q2 1341 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 K7ELQ4 463 aaPredicted RBP14.64□□□□□ -0.07
ABCA3-201ENST00000301732 PRKAR2BP31323 418 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 NUTM1Q86Y26 1132 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 GNAI1P63096 354 aa14.63□□□□□ -0.07
ABCA3-201ENST00000301732 XBP1P17861 261 aa14.63□□□□□ -0.07
ABCA3-201ENST00000301732 ZSWIM4Q9H7M6 989 aa14.63□□□□□ -0.07
ABCA3-201ENST00000301732 SPATA32Q96LK8 384 aa14.63□□□□□ -0.07
ABCA3-201ENST00000301732 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
ABCA3-201ENST00000301732 IGSF3O75054 1194 aa14.62□□□□□ -0.07
ABCA3-201ENST00000301732 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.07
ABCA3-201ENST00000301732 ZNF830Q96NB3 372 aaPredicted RBP14.62□□□□□ -0.07
ABCA3-201ENST00000301732 BACH2Q9BYV9 841 aa14.62□□□□□ -0.07
ABCA3-201ENST00000301732 ATP2C2O75185 946 aa14.62□□□□□ -0.07
ABCA3-201ENST00000301732 CNNM1Q9NRU3 951 aa14.62□□□□□ -0.07
ABCA3-201ENST00000301732 ZNHIT6Q9NWK9 470 aaKnown RBP14.62□□□□□ -0.07
ABCA3-201ENST00000301732 MBD3O95983 291 aa14.62□□□□□ -0.07
ABCA3-201ENST00000301732 MTERF4Q7Z6M4 381 aaKnown RBP14.61□□□□□ -0.07
ABCA3-201ENST00000301732 UPF3BQ9BZI7 483 aaKnown RBP14.61□□□□□ -0.07
ABCA3-201ENST00000301732 C16orf45Q96MC5 204 aaPredicted RBP14.61□□□□□ -0.07
ABCA3-201ENST00000301732 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
ABCA3-201ENST00000301732 GOPCQ9HD26 462 aa14.61□□□□□ -0.07
ABCA3-201ENST00000301732 RAI14Q9P0K7 980 aa14.61□□□□□ -0.07
ABCA3-201ENST00000301732 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
ABCA3-201ENST00000301732 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
ABCA3-201ENST00000301732 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
ABCA3-201ENST00000301732 RNF187Q5TA31 235 aaPredicted RBP14.61□□□□□ -0.07
ABCA3-201ENST00000301732 DYDC1Q8WWB3 177 aa14.61□□□□□ -0.07
ABCA3-201ENST00000301732 CYP46A1Q9Y6A2 500 aa14.61□□□□□ -0.07
ABCA3-201ENST00000301732 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 KIAA1328Q86T90 577 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 MCM4P33991 863 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 RBM27Q9P2N5 1060 aaKnown RBP14.6□□□□□ -0.07
ABCA3-201ENST00000301732 HMGN5P82970 282 aaKnown RBP14.6□□□□□ -0.07
ABCA3-201ENST00000301732 RAPGEF4Q8WZA2 1011 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 PSMD1Q99460 953 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
ABCA3-201ENST00000301732 MATR3P43243 847 aaKnown RBP eCLIP14.6□□□□□ -0.07
ABCA3-201ENST00000301732 CCDC83Q8IWF9 413 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 CCDC7Q96M83 1385 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 LETM1O95202 739 aaPredicted RBP14.6□□□□□ -0.07
ABCA3-201ENST00000301732 USP5P45974 858 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 FAM107BQ9H098 131 aa14.6□□□□□ -0.07
ABCA3-201ENST00000301732 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
ABCA3-201ENST00000301732 ZNF396Q96N95 335 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-201ENST00000301732 URI1O94763 535 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-201ENST00000301732 UBE4AQ14139 1066 aa14.59□□□□□ -0.07
ABCA3-201ENST00000301732 RAB11FIP4Q86YS3 637 aa14.59□□□□□ -0.07
ABCA3-201ENST00000301732 CCDC97Q96F63 343 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-201ENST00000301732 TERF1P54274 439 aa14.59□□□□□ -0.07
ABCA3-201ENST00000301732 MYO6Q9UM54 1294 aa14.59□□□□□ -0.07
ABCA3-201ENST00000301732 BAZ1AQ9NRL2 1556 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-201ENST00000301732 CFAP45Q9UL16 551 aa14.58□□□□□ -0.07
ABCA3-201ENST00000301732 NLRP6P59044 892 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 SART3Q15020 963 aaKnown RBP14.58□□□□□ -0.08
ABCA3-201ENST00000301732 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 TXLNAP40222 546 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 RABEP1Q15276 862 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.08
ABCA3-201ENST00000301732 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 CASTP20810 708 aaKnown RBP14.58□□□□□ -0.08
ABCA3-201ENST00000301732 C20orf194Q5TEA3 1177 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 PUS7Q96PZ0 661 aaKnown RBP14.58□□□□□ -0.08
ABCA3-201ENST00000301732 NUP62CLQ9H1M0 184 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 ERLIN2O94905 339 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 HSP90AA4PQ58FG1 418 aa14.58□□□□□ -0.08
ABCA3-201ENST00000301732 THUMPD2Q9BTF0 503 aaKnown RBP14.58□□□□□ -0.08
ABCA3-201ENST00000301732 CCDC69A6NI79 296 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 AACSQ86V21 672 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 USP25Q9UHP3 1055 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 BIN1O00499 593 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 RBM5P52756 815 aaKnown RBP eCLIP14.57□□□□□ -0.08
ABCA3-201ENST00000301732 PPP4R3BQ5MIZ7 849 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 LIG1P18858 919 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 PDRG1Q9NUG6 133 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 PPARDQ03181 441 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 HSP90AB4PQ58FF6 505 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 EXOC6BQ9Y2D4 811 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 GIMAP7Q8NHV1 300 aa14.57□□□□□ -0.08
ABCA3-201ENST00000301732 BICDL1Q6ZP65 573 aa14.56□□□□□ -0.08
ABCA3-201ENST00000301732 UBXN4Q92575 508 aa14.56□□□□□ -0.08
ABCA3-201ENST00000301732 EIF5P55010 431 aaKnown RBP14.56□□□□□ -0.08
ABCA3-201ENST00000301732 KRT85P78386 507 aa14.56□□□□□ -0.08
ABCA3-201ENST00000301732 MACROD2A1Z1Q3 448 aa14.56□□□□□ -0.08
ABCA3-201ENST00000301732 SSFA2P28290 1259 aa14.56□□□□□ -0.08
ABCA3-201ENST00000301732 PANK2Q9BZ23 570 aa14.56□□□□□ -0.08
ABCA3-201ENST00000301732 CCDC18Q5T9S5 1454 aa14.56□□□□□ -0.08
ABCA3-201ENST00000301732 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.56□□□□□ -0.083e-6■■■■□ 23.8
ABCA3-201ENST00000301732 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
ABCA3-201ENST00000301732 GNAI2P04899 355 aa14.55□□□□□ -0.08
ABCA3-201ENST00000301732 PPP2R1AP30153 589 aa14.55□□□□□ -0.08
ABCA3-201ENST00000301732 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
ABCA3-201ENST00000301732 RAPGEF2Q9Y4G8 1499 aa14.54□□□□□ -0.08
ABCA3-201ENST00000301732 EPB41L2O43491 1005 aaKnown RBP14.54□□□□□ -0.08
ABCA3-201ENST00000301732 RRP9O43818 475 aaKnown RBP14.54□□□□□ -0.08
ABCA3-201ENST00000301732 NF2P35240 595 aa14.54□□□□□ -0.08
ABCA3-201ENST00000301732 ARHGAP29Q52LW3 1261 aa14.54□□□□□ -0.08
ABCA3-201ENST00000301732 CHD1LQ86WJ1 897 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms