RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 CSPP1Q1MSJ5 1256 aa17.88■□□□□ 0.45
CDH23-202ENST00000299366 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
CDH23-202ENST00000299366 SYCE3A1L190 88 aa17.88■□□□□ 0.45
CDH23-202ENST00000299366 ERC2O15083 957 aa17.88■□□□□ 0.45
CDH23-202ENST00000299366 CEBPAP49715 358 aaPredicted RBP17.88■□□□□ 0.45
CDH23-202ENST00000299366 RTEL1-TNFRSF6BF6WH68 1400 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 WASHC4Q2M389 1173 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
CDH23-202ENST00000299366 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 GRIN2AQ12879 1464 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 CPLX1O14810 134 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 LRRCC1Q9C099 1032 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 NOS1P29475 1434 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 TNPO1Q92973 898 aaKnown RBP17.87■□□□□ 0.45
CDH23-202ENST00000299366 CHMP4CQ96CF2 233 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
CDH23-202ENST00000299366 NCKAP5LQ9HCH0 1330 aa17.86■□□□□ 0.45
CDH23-202ENST00000299366 TCOF1Q13428 1488 aaKnown RBP17.86■□□□□ 0.45
CDH23-202ENST00000299366 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
CDH23-202ENST00000299366 SLC52A1Q9NWF4 448 aa17.86■□□□□ 0.45
CDH23-202ENST00000299366 RALGAPBQ86X10 1494 aa17.85■□□□□ 0.45
CDH23-202ENST00000299366 EVA1CP58658 441 aa17.85■□□□□ 0.45
CDH23-202ENST00000299366 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
CDH23-202ENST00000299366 ZNF530Q6P9A1 599 aaPredicted RBP17.85■□□□□ 0.45
CDH23-202ENST00000299366 TSPYL6Q8N831 410 aa17.85■□□□□ 0.45
CDH23-202ENST00000299366 TBC1D32Q96NH3 1257 aa17.85■□□□□ 0.45
CDH23-202ENST00000299366 TBC1D9Q6ZT07 1266 aa17.84■□□□□ 0.45
CDH23-202ENST00000299366 ZMYND15Q9H091 742 aa17.84■□□□□ 0.45
CDH23-202ENST00000299366 MTMR7Q9Y216 660 aa17.84■□□□□ 0.45
CDH23-202ENST00000299366 CUL7Q14999 1698 aa17.84■□□□□ 0.45
CDH23-202ENST00000299366 DDX58O95786 925 aaKnown RBP17.84■□□□□ 0.45
CDH23-202ENST00000299366 NUP153P49790 1475 aaKnown RBP17.83■□□□□ 0.45
CDH23-202ENST00000299366 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
CDH23-202ENST00000299366 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
CDH23-202ENST00000299366 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
CDH23-202ENST00000299366 FYB1O15117 783 aa17.82■□□□□ 0.44
CDH23-202ENST00000299366 SRCIN1Q9C0H9 1055 aa17.82■□□□□ 0.44
CDH23-202ENST00000299366 CLSTN1O94985 981 aa17.82■□□□□ 0.44
CDH23-202ENST00000299366 MBIPQ9NS73 344 aa17.82■□□□□ 0.44
CDH23-202ENST00000299366 JARID2Q92833 1246 aaPredicted RBP17.81■□□□□ 0.44
CDH23-202ENST00000299366 RNF20Q5VTR2 975 aa17.81■□□□□ 0.44
CDH23-202ENST00000299366 RBM27Q9P2N5 1060 aaKnown RBP17.81■□□□□ 0.44
CDH23-202ENST00000299366 SDF4Q9BRK5 362 aa17.81■□□□□ 0.44
CDH23-202ENST00000299366 TRIM5Q9C035 493 aa17.81■□□□□ 0.44
CDH23-202ENST00000299366 HSP90AB2PQ58FF8 381 aa17.8■□□□□ 0.44
CDH23-202ENST00000299366 SASS6Q6UVJ0 657 aa17.8■□□□□ 0.44
CDH23-202ENST00000299366 PHACTR3Q96KR7 559 aa17.8■□□□□ 0.44
CDH23-202ENST00000299366 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
CDH23-202ENST00000299366 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
CDH23-202ENST00000299366 C8orf58Q8NAV2 365 aa17.79■□□□□ 0.44
CDH23-202ENST00000299366 MEIS3Q99687 375 aa17.79■□□□□ 0.44
CDH23-202ENST00000299366 ATP10BO94823 1461 aa17.79■□□□□ 0.44
CDH23-202ENST00000299366 JAKMIP1Q96N16 626 aaKnown RBP17.79■□□□□ 0.44
CDH23-202ENST00000299366 AACSQ86V21 672 aa17.79■□□□□ 0.44
CDH23-202ENST00000299366 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
CDH23-202ENST00000299366 KIF3AQ9Y496 699 aa17.79■□□□□ 0.44
CDH23-202ENST00000299366 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.78■□□□□ 0.44
CDH23-202ENST00000299366 HOMER1Q86YM7 354 aa17.78■□□□□ 0.44
CDH23-202ENST00000299366 LRRFIP2Q9Y608 721 aaKnown RBP17.78■□□□□ 0.44
CDH23-202ENST00000299366 CAMK4Q16566 473 aa17.78■□□□□ 0.44
CDH23-202ENST00000299366 TPM4P67936 248 aa17.77■□□□□ 0.44
CDH23-202ENST00000299366 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
CDH23-202ENST00000299366 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
CDH23-202ENST00000299366 NFXL1Q6ZNB6 911 aa17.77■□□□□ 0.44
CDH23-202ENST00000299366 CTTNBP2Q8WZ74 1663 aa17.77■□□□□ 0.44
CDH23-202ENST00000299366 BCORL1Q5H9F3 1711 aa17.77■□□□□ 0.44
CDH23-202ENST00000299366 RAD21O60216 631 aa17.77■□□□□ 0.43
CDH23-202ENST00000299366 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.43
CDH23-202ENST00000299366 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.43
CDH23-202ENST00000299366 TSPY26PQ9H489 355 aa17.77■□□□□ 0.43
CDH23-202ENST00000299366 CT47B1P0C2W7 299 aaPredicted RBP17.76■□□□□ 0.43
CDH23-202ENST00000299366 MPRIPQ6WCQ1 1025 aa17.76■□□□□ 0.43
CDH23-202ENST00000299366 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
CDH23-202ENST00000299366 HSP90AB4PQ58FF6 505 aa17.76■□□□□ 0.43
CDH23-202ENST00000299366 CCDC83Q8IWF9 413 aa17.76■□□□□ 0.43
CDH23-202ENST00000299366 C14orf93Q9H972 538 aaKnown RBP17.76■□□□□ 0.43
CDH23-202ENST00000299366 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
CDH23-202ENST00000299366 SCAF11Q99590 1463 aaKnown RBP17.76■□□□□ 0.43
CDH23-202ENST00000299366 BOLA2Q9H3K6 86 aa17.75■□□□□ 0.43
CDH23-202ENST00000299366 CCDC8Q9H0W5 538 aaPredicted RBP17.75■□□□□ 0.43
CDH23-202ENST00000299366 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.75■□□□□ 0.43
CDH23-202ENST00000299366 LARP1BQ659C4 914 aaKnown RBP17.75■□□□□ 0.43
CDH23-202ENST00000299366 CCDC73Q6ZRK6 1079 aa17.75■□□□□ 0.43
CDH23-202ENST00000299366 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
CDH23-202ENST00000299366 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
CDH23-202ENST00000299366 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
CDH23-202ENST00000299366 FOXO3O43524 673 aa17.74■□□□□ 0.43
CDH23-202ENST00000299366 MBD3O95983 291 aa17.74■□□□□ 0.43
CDH23-202ENST00000299366 KAT6BQ8WYB5 2073 aa17.74■□□□□ 0.43
CDH23-202ENST00000299366 MX1P20591 662 aa17.74■□□□□ 0.43
CDH23-202ENST00000299366 PTCD1O75127 700 aaKnown RBP17.73■□□□□ 0.43
CDH23-202ENST00000299366 RRP12Q5JTH9 1297 aaKnown RBP17.73■□□□□ 0.43
CDH23-202ENST00000299366 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
CDH23-202ENST00000299366 RRP9O43818 475 aaKnown RBP17.73■□□□□ 0.43
CDH23-202ENST00000299366 CLCN1P35523 988 aa17.73■□□□□ 0.43
CDH23-202ENST00000299366 TRDNQ13061 729 aa17.73■□□□□ 0.43
CDH23-202ENST00000299366 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
CDH23-202ENST00000299366 PRPF40BQ6NWY9 871 aaKnown RBP17.73■□□□□ 0.43
CDH23-202ENST00000299366 RALYLQ86SE5 291 aaKnown RBP17.73■□□□□ 0.43
CDH23-202ENST00000299366 TPD52L1Q16890 204 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms