RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 EPB41L2O43491 1005 aaKnown RBP14.24□□□□□ -0.13
PCF11-201ENST00000298281 ZNF76P36508 570 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 ZNF396Q96N95 335 aaPredicted RBP14.23□□□□□ -0.13
PCF11-201ENST00000298281 STIM1Q13586 685 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 GPRASP1Q5JY77 1395 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 FSD1Q9BTV5 496 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
PCF11-201ENST00000298281 GNL3LQ9NVN8 582 aaKnown RBP14.23□□□□□ -0.13
PCF11-201ENST00000298281 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 KIF6Q6ZMV9 814 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 RGS22Q8NE09 1264 aa14.23□□□□□ -0.13
PCF11-201ENST00000298281 CCDC113Q9H0I3 377 aa14.22□□□□□ -0.13
PCF11-201ENST00000298281 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
PCF11-201ENST00000298281 NASPP49321 788 aaPredicted RBP14.21□□□□□ -0.13
PCF11-201ENST00000298281 TTLL12Q14166 644 aaPredicted RBP14.21□□□□□ -0.13
PCF11-201ENST00000298281 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
PCF11-201ENST00000298281 SMG6Q86US8 1419 aaKnown RBP14.21□□□□□ -0.13
PCF11-201ENST00000298281 BMS1Q14692 1282 aaKnown RBP14.21□□□□□ -0.13
PCF11-201ENST00000298281 RRBP1Q9P2E9 1410 aaKnown RBP14.21□□□□□ -0.13
PCF11-201ENST00000298281 PLEKHO1Q53GL0 409 aaPredicted RBP14.21□□□□□ -0.14
PCF11-201ENST00000298281 CCDC66A2RUB6 948 aa14.2□□□□□ -0.14
PCF11-201ENST00000298281 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.2□□□□□ -0.143e-11■□□□□ 10.1
PCF11-201ENST00000298281 UBE4AQ14139 1066 aa14.2□□□□□ -0.14
PCF11-201ENST00000298281 ANKRD1Q15327 319 aa14.2□□□□□ -0.14
PCF11-201ENST00000298281 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
PCF11-201ENST00000298281 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
PCF11-201ENST00000298281 SCAPERQ9BY12 1400 aa14.2□□□□□ -0.14
PCF11-201ENST00000298281 ANKRD18BA2A2Z9 1011 aa14.2□□□□□ -0.14
PCF11-201ENST00000298281 JAKMIP3Q5VZ66 844 aa14.19□□□□□ -0.14
PCF11-201ENST00000298281 TIGD1Q96MW7 591 aa14.19□□□□□ -0.14
PCF11-201ENST00000298281 SSBP05455 408 aaKnown RBP eCLIP14.19□□□□□ -0.14
PCF11-201ENST00000298281 FAM177A1Q8N128 213 aaPredicted RBP14.19□□□□□ -0.14
PCF11-201ENST00000298281 TRIM5Q9C035 493 aa14.19□□□□□ -0.14
PCF11-201ENST00000298281 DACH1Q9UI36 760 aa14.19□□□□□ -0.14
PCF11-201ENST00000298281 PDIA4P13667 645 aaKnown RBP14.19□□□□□ -0.14
PCF11-201ENST00000298281 TICAM2Q86XR7 235 aa14.19□□□□□ -0.14
PCF11-201ENST00000298281 NLRP6P59044 892 aa14.19□□□□□ -0.14
PCF11-201ENST00000298281 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
PCF11-201ENST00000298281 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 HMOX1P09601 288 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 ARL1P40616 181 aaPredicted RBP14.18□□□□□ -0.14
PCF11-201ENST00000298281 SURF6O75683 361 aaKnown RBP14.18□□□□□ -0.14
PCF11-201ENST00000298281 GIGYF2Q6Y7W6 1299 aaKnown RBP14.18□□□□□ -0.14
PCF11-201ENST00000298281 GCC1Q96CN9 775 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 NFKBIBQ15653 356 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 PPP4R3AQ6IN85 833 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 PPFIBP1Q86W92 1011 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 WIZO95785 1651 aa14.18□□□□□ -0.14
PCF11-201ENST00000298281 FERP16591 822 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 CEBPZQ03701 1054 aaKnown RBP14.17□□□□□ -0.14
PCF11-201ENST00000298281 TRIM22Q8IYM9 498 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 TMCO5BA8MYB1 307 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 CETN2P41208 172 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 LRSAM1Q6UWE0 723 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 LRRCC1Q9C099 1032 aa14.17□□□□□ -0.14
PCF11-201ENST00000298281 SERPINC1P01008 464 aa14.16□□□□□ -0.14
PCF11-201ENST00000298281 CCDC150Q8NCX0 1101 aa14.16□□□□□ -0.14
PCF11-201ENST00000298281 PNISRQ8TF01 805 aaKnown RBP14.16□□□□□ -0.14
PCF11-201ENST00000298281 CNTLNQ9NXG0 1405 aa14.16□□□□□ -0.14
PCF11-201ENST00000298281 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
PCF11-201ENST00000298281 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
PCF11-201ENST00000298281 AEBP1Q8IUX7 1158 aa14.16□□□□□ -0.14
PCF11-201ENST00000298281 GNAI2P04899 355 aa14.16□□□□□ -0.14
PCF11-201ENST00000298281 UQCRHLA0A096LP55 91 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 ZSCAN25Q6NSZ9 544 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 STK38Q15208 465 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 ERLIN1O75477 346 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 FERMT2Q96AC1 680 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 CNNM1Q9NRU3 951 aa14.15□□□□□ -0.14
PCF11-201ENST00000298281 PRDM2Q13029 1718 aa14.14□□□□□ -0.15
PCF11-201ENST00000298281 CTNNBL1Q8WYA6 563 aaPredicted RBP14.14□□□□□ -0.15
PCF11-201ENST00000298281 HOOK3Q86VS8 718 aa14.14□□□□□ -0.15
PCF11-201ENST00000298281 SH3BP5O60239 455 aa14.14□□□□□ -0.15
PCF11-201ENST00000298281 TSPY26PQ9H489 355 aa14.14□□□□□ -0.15
PCF11-201ENST00000298281 NEK4P51957 841 aa14.14□□□□□ -0.15
PCF11-201ENST00000298281 KIAA1328Q86T90 577 aa14.14□□□□□ -0.15
PCF11-201ENST00000298281 USP5P45974 858 aa14.13□□□□□ -0.15
PCF11-201ENST00000298281 CCT4P50991 539 aaKnown RBP14.13□□□□□ -0.15
PCF11-201ENST00000298281 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
PCF11-201ENST00000298281 SPC24Q8NBT2 197 aa14.13□□□□□ -0.15
PCF11-201ENST00000298281 GSTTP1A0A1W2PQM5 241 aa14.13□□□□□ -0.15
PCF11-201ENST00000298281 ABTB2Q8N961 1025 aa14.13□□□□□ -0.15
PCF11-201ENST00000298281 SRCIN1Q9C0H9 1055 aa14.13□□□□□ -0.15
PCF11-201ENST00000298281 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
PCF11-201ENST00000298281 TTC39AQ5SRH9 613 aa14.12□□□□□ -0.15
PCF11-201ENST00000298281 IQCEQ6IPM2 695 aa14.12□□□□□ -0.15
PCF11-201ENST00000298281 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
PCF11-201ENST00000298281 CAVIN1Q6NZI2 390 aaKnown RBP14.12□□□□□ -0.15
PCF11-201ENST00000298281 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
PCF11-201ENST00000298281 CDKL5O76039 1030 aa14.12□□□□□ -0.15
PCF11-201ENST00000298281 NOP2P46087 812 aaKnown RBP14.12□□□□□ -0.15
PCF11-201ENST00000298281 CYP46A1Q9Y6A2 500 aa14.12□□□□□ -0.15
PCF11-201ENST00000298281 MTHFSP49914 203 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms