RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PLEKHF1Q96S99 279 aa32.68■■■□□ 2.82
GTF2A1-201ENST00000298173 CABLES1Q8TDN4 633 aa32.67■■■□□ 2.82
GTF2A1-201ENST00000298173 SENP3-EIF4A1A0A087X0R7 540 aa32.66■■■□□ 2.82
GTF2A1-201ENST00000298173 FCHSD2O94868 740 aa32.66■■■□□ 2.82
GTF2A1-201ENST00000298173 RGPD1P0DJD0 1748 aa32.66■■■□□ 2.82
GTF2A1-201ENST00000298173 PLEKHG5O94827 1062 aa32.65■■■□□ 2.82
GTF2A1-201ENST00000298173 LRRC59Q96AG4 307 aaKnown RBP32.65■■■□□ 2.82
GTF2A1-201ENST00000298173 UBAP1LF5GYI3 381 aa32.64■■■□□ 2.82
GTF2A1-201ENST00000298173 APAF1O14727 1248 aa32.64■■■□□ 2.82
GTF2A1-201ENST00000298173 RSPH6AQ9H0K4 717 aa32.62■■■□□ 2.81
GTF2A1-201ENST00000298173 PNNQ9H307 717 aaKnown RBP32.62■■■□□ 2.81
GTF2A1-201ENST00000298173 ZC3H6P61129 1189 aaKnown RBP32.6■■■□□ 2.81
GTF2A1-201ENST00000298173 CPDO75976 1380 aa32.6■■■□□ 2.81
GTF2A1-201ENST00000298173 PIP4K2BP78356 416 aa32.59■■■□□ 2.81
GTF2A1-201ENST00000298173 NGEFQ8N5V2 710 aa32.59■■■□□ 2.81
GTF2A1-201ENST00000298173 COL18A1P39060 1754 aa32.59■■■□□ 2.81
GTF2A1-201ENST00000298173 PHLPP1O60346 1717 aa32.58■■■□□ 2.81
GTF2A1-201ENST00000298173 ABCA3Q99758 1704 aa32.58■■■□□ 2.81
GTF2A1-201ENST00000298173 TCP11L2Q8N4U5 519 aa32.58■■■□□ 2.81
GTF2A1-201ENST00000298173 COL16A1Q07092 1604 aaPredicted RBP32.57■■■□□ 2.81
GTF2A1-201ENST00000298173 HMOX1P09601 288 aa32.57■■■□□ 2.8
GTF2A1-201ENST00000298173 SALL2Q9Y467 1007 aaPredicted RBP32.57■■■□□ 2.8
GTF2A1-201ENST00000298173 NCBP3Q53F19 620 aaKnown RBP32.56■■■□□ 2.8
GTF2A1-201ENST00000298173 EYA1Q99502 592 aa32.56■■■□□ 2.8
GTF2A1-201ENST00000298173 AXIN2Q9Y2T1 843 aa32.56■■■□□ 2.8
GTF2A1-201ENST00000298173 IGSF1Q8N6C5 1336 aa32.55■■■□□ 2.8
GTF2A1-201ENST00000298173 ZNF521Q96K83 1311 aa32.54■■■□□ 2.8
GTF2A1-201ENST00000298173 ZBTB7CA1YPR0 619 aa32.54■■■□□ 2.8
GTF2A1-201ENST00000298173 PRKAR2BP31323 418 aa32.54■■■□□ 2.8
GTF2A1-201ENST00000298173 ABCC6O95255 1503 aa32.54■■■□□ 2.8
GTF2A1-201ENST00000298173 RGPD5Q99666 1765 aa32.54■■■□□ 2.8
GTF2A1-201ENST00000298173 COL22A1Q8NFW1 1626 aaPredicted RBP32.54■■■□□ 2.8
GTF2A1-201ENST00000298173 SULT6B1Q6IMI4 303 aa32.53■■■□□ 2.8
GTF2A1-201ENST00000298173 KDRP35968 1356 aa32.52■■■□□ 2.8
GTF2A1-201ENST00000298173 AEBP1Q8IUX7 1158 aa32.52■■■□□ 2.8
GTF2A1-201ENST00000298173 KIAA0232Q92628 1395 aa32.52■■■□□ 2.8
GTF2A1-201ENST00000298173 LTV1Q96GA3 475 aaPredicted RBP32.5■■■□□ 2.79
GTF2A1-201ENST00000298173 PHF23Q9BUL5 403 aaPredicted RBP32.5■■■□□ 2.79
GTF2A1-201ENST00000298173 PHACTR3Q96KR7 559 aa32.5■■■□□ 2.79
GTF2A1-201ENST00000298173 PDE3BQ13370 1112 aa32.49■■■□□ 2.79
GTF2A1-201ENST00000298173 MAPK8IP3Q9UPT6 1336 aa32.49■■■□□ 2.79
GTF2A1-201ENST00000298173 TMPOP42166 694 aaKnown RBP32.47■■■□□ 2.79
GTF2A1-201ENST00000298173 CCDC27Q2M243 656 aa32.47■■■□□ 2.79
GTF2A1-201ENST00000298173 ANKRD24Q8TF21 1146 aa32.46■■■□□ 2.79
GTF2A1-201ENST00000298173 RRP7AQ9Y3A4 280 aaKnown RBP32.46■■■□□ 2.79
GTF2A1-201ENST00000298173 RGPD2P0DJD1 1756 aa32.46■■■□□ 2.79
GTF2A1-201ENST00000298173 CHRNA2Q15822 529 aa32.45■■■□□ 2.79
GTF2A1-201ENST00000298173 NBPF6Q5VWK0 638 aa32.45■■■□□ 2.79
GTF2A1-201ENST00000298173 NBPF4Q96M43 638 aa32.45■■■□□ 2.79
GTF2A1-201ENST00000298173 WWC1Q8IX03 1113 aa32.44■■■□□ 2.78
GTF2A1-201ENST00000298173 ERBB3P21860 1342 aa32.44■■■□□ 2.78
GTF2A1-201ENST00000298173 NEFMP07197 916 aa32.43■■■□□ 2.78
GTF2A1-201ENST00000298173 HAP1P54257 671 aaPredicted RBP32.43■■■□□ 2.78
GTF2A1-201ENST00000298173 NEUROD2Q15784 382 aa32.43■■■□□ 2.78
GTF2A1-201ENST00000298173 NCAPD2Q15021 1401 aa32.43■■■□□ 2.78
GTF2A1-201ENST00000298173 LMO7Q8WWI1 1683 aa32.42■■■□□ 2.78
GTF2A1-201ENST00000298173 PRDM11Q9NQV5 511 aa32.42■■■□□ 2.78
GTF2A1-201ENST00000298173 CAMTA1Q9Y6Y1 1673 aa32.41■■■□□ 2.78
GTF2A1-201ENST00000298173 CDCA7LQ96GN5 454 aa32.4■■■□□ 2.78
GTF2A1-201ENST00000298173 NFE2L2Q16236 605 aa32.39■■■□□ 2.78
GTF2A1-201ENST00000298173 TRIM35Q9UPQ4 493 aa32.39■■■□□ 2.78
GTF2A1-201ENST00000298173 FAM83GA6ND36 823 aa32.37■■■□□ 2.77
GTF2A1-201ENST00000298173 RIPK4P57078 832 aa32.37■■■□□ 2.77
GTF2A1-201ENST00000298173 GOLGA2Q08379 1002 aa32.37■■■□□ 2.77
GTF2A1-201ENST00000298173 DLG5Q8TDM6 1919 aa32.35■■■□□ 2.77
GTF2A1-201ENST00000298173 WDR63Q8IWG1 891 aa32.35■■■□□ 2.77
GTF2A1-201ENST00000298173 USHBP1Q8N6Y0 703 aa32.35■■■□□ 2.77
GTF2A1-201ENST00000298173 FAM208AQ9UK61 1670 aaKnown RBP32.34■■■□□ 2.77
GTF2A1-201ENST00000298173 TRMT2AQ8IZ69 625 aaKnown RBP32.33■■■□□ 2.77
GTF2A1-201ENST00000298173 SLFN5Q08AF3 891 aa32.32■■■□□ 2.76
GTF2A1-201ENST00000298173 SPINK5Q9NQ38 1064 aaPredicted RBP32.31■■■□□ 2.76
GTF2A1-201ENST00000298173 COL5A2P05997 1499 aaPredicted RBP32.3■■■□□ 2.76
GTF2A1-201ENST00000298173 MTHFSDQ2M296 383 aaKnown RBP32.29■■■□□ 2.76
GTF2A1-201ENST00000298173 COL14A1Q05707 1796 aaKnown RBP32.29■■■□□ 2.76
GTF2A1-201ENST00000298173 WDR17Q8IZU2 1322 aa32.27■■■□□ 2.76
GTF2A1-201ENST00000298173 JCADQ9P266 1359 aa32.27■■■□□ 2.76
GTF2A1-201ENST00000298173 E9PSI1 815 aa32.27■■■□□ 2.76
GTF2A1-201ENST00000298173 DUSP27Q5VZP5 1158 aa32.27■■■□□ 2.76
GTF2A1-201ENST00000298173 NLRP2Q9NX02 1062 aa32.27■■■□□ 2.76
GTF2A1-201ENST00000298173 CSB-PGBD3P0DP91 1061 aa32.26■■■□□ 2.75
GTF2A1-201ENST00000298173 GAS2L2Q8NHY3 880 aa32.24■■■□□ 2.75
GTF2A1-201ENST00000298173 LMOD3Q0VAK6 560 aa32.23■■■□□ 2.75
GTF2A1-201ENST00000298173 IL16Q14005 1332 aa32.22■■■□□ 2.75
GTF2A1-201ENST00000298173 BTG4Q9NY30 223 aa32.21■■■□□ 2.75
GTF2A1-201ENST00000298173 HSPA1LP34931 641 aa32.2■■■□□ 2.74
GTF2A1-201ENST00000298173 EVA1CP58658 441 aa32.18■■■□□ 2.74
GTF2A1-201ENST00000298173 CARD10Q9BWT7 1032 aa32.18■■■□□ 2.74
GTF2A1-201ENST00000298173 PLEKHG2Q9H7P9 1386 aa32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 NUTM2BA6NNL0 878 aaPredicted RBP32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 NUTM2EB1AL46 878 aaPredicted RBP32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 HTATSF1O43719 755 aaKnown RBP32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 ADAMTS2O95450 1211 aa32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 AMOTQ4VCS5 1084 aa32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 LARP1Q6PKG0 1096 aaKnown RBP32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 TOM1L2Q6ZVM7 507 aa32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 NUTM2AQ8IVF1 878 aaPredicted RBP32.17■■■□□ 2.74
GTF2A1-201ENST00000298173 PLEKHO1Q53GL0 409 aaPredicted RBP32.16■■■□□ 2.74
GTF2A1-201ENST00000298173 STRN4Q9NRL3 753 aa32.15■■■□□ 2.74
GTF2A1-201ENST00000298173 THUMPD2Q9BTF0 503 aaKnown RBP32.15■■■□□ 2.74
GTF2A1-201ENST00000298173 SPATA31A6Q5VVP1 1343 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms