RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CABP4P57796 275 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 GRPEL1Q9HAV7 217 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
FNDC1-201ENST00000297267 TNMDQ9H2S6 317 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 PSMA5P28066 241 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 STK38Q15208 465 aa18.42■□□□□ 0.54
FNDC1-201ENST00000297267 F6X3S4 739 aa18.41■□□□□ 0.54
FNDC1-201ENST00000297267 KINO60870 393 aaKnown RBP18.41■□□□□ 0.54
FNDC1-201ENST00000297267 OFD1O75665 1012 aa18.41■□□□□ 0.54
FNDC1-201ENST00000297267 CCDC82Q8N4S0 544 aa18.41■□□□□ 0.54
FNDC1-201ENST00000297267 TANGO6Q9C0B7 1094 aa18.41■□□□□ 0.54
FNDC1-201ENST00000297267 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
FNDC1-201ENST00000297267 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
FNDC1-201ENST00000297267 ZFP91Q96JP5 570 aaPredicted RBP18.4■□□□□ 0.54
FNDC1-201ENST00000297267 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
FNDC1-201ENST00000297267 AK7Q96M32 723 aa18.4■□□□□ 0.54
FNDC1-201ENST00000297267 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
FNDC1-201ENST00000297267 CASTP20810 708 aaKnown RBP18.4■□□□□ 0.54
FNDC1-201ENST00000297267 GDPD2Q9HCC8 539 aa18.4■□□□□ 0.54
FNDC1-201ENST00000297267 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
FNDC1-201ENST00000297267 BRMS1Q9HCU9 246 aa18.39■□□□□ 0.54
FNDC1-201ENST00000297267 SEPT11Q9NVA2 429 aaKnown RBP18.39■□□□□ 0.54
FNDC1-201ENST00000297267 CUX1P39880 1505 aa18.39■□□□□ 0.54
FNDC1-201ENST00000297267 KRT18P05783 430 aaKnown RBP18.39■□□□□ 0.53
FNDC1-201ENST00000297267 ISM2Q6H9L7 571 aa18.39■□□□□ 0.53
FNDC1-201ENST00000297267 TOM1L2Q6ZVM7 507 aa18.39■□□□□ 0.53
FNDC1-201ENST00000297267 NESP48681 1621 aa18.38■□□□□ 0.53
FNDC1-201ENST00000297267 RAPGEF3O95398 923 aa18.38■□□□□ 0.53
FNDC1-201ENST00000297267 MAP7D2Q96T17 732 aa18.38■□□□□ 0.53
FNDC1-201ENST00000297267 PRG4Q92954 1404 aaPredicted RBP18.38■□□□□ 0.53
FNDC1-201ENST00000297267 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
FNDC1-201ENST00000297267 CCDC83Q8IWF9 413 aa18.38■□□□□ 0.53
FNDC1-201ENST00000297267 DHX8Q14562 1220 aaKnown RBP18.38■□□□□ 0.53
FNDC1-201ENST00000297267 NAT10Q9H0A0 1025 aaKnown RBP18.38■□□□□ 0.53
FNDC1-201ENST00000297267 TRMT1LQ7Z2T5 733 aaKnown RBP18.38■□□□□ 0.53
FNDC1-201ENST00000297267 CCDC144CPQ8IYA2 1237 aa18.38■□□□□ 0.53
FNDC1-201ENST00000297267 MVPQ14764 893 aaKnown RBP18.37■□□□□ 0.53
FNDC1-201ENST00000297267 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
FNDC1-201ENST00000297267 LARP1BQ659C4 914 aaKnown RBP18.37■□□□□ 0.53
FNDC1-201ENST00000297267 TBC1D2BQ9UPU7 963 aa18.37■□□□□ 0.53
FNDC1-201ENST00000297267 CHMP4BP1P59074 171 aa18.37■□□□□ 0.53
FNDC1-201ENST00000297267 PDRG1Q9NUG6 133 aa18.37■□□□□ 0.53
FNDC1-201ENST00000297267 MIA2Q96PC5 1412 aa18.37■□□□□ 0.53
FNDC1-201ENST00000297267 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
FNDC1-201ENST00000297267 DNA2P51530 1060 aa18.36■□□□□ 0.53
FNDC1-201ENST00000297267 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
FNDC1-201ENST00000297267 SSBP05455 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
FNDC1-201ENST00000297267 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
FNDC1-201ENST00000297267 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
FNDC1-201ENST00000297267 PNISRQ8TF01 805 aaKnown RBP18.36■□□□□ 0.53
FNDC1-201ENST00000297267 FILIP1Q7Z7B0 1213 aa18.35■□□□□ 0.53
FNDC1-201ENST00000297267 ERBINQ96RT1 1412 aa18.35■□□□□ 0.53
FNDC1-201ENST00000297267 CCDC158Q5M9N0 1113 aa18.35■□□□□ 0.53
FNDC1-201ENST00000297267 ZNF530Q6P9A1 599 aaPredicted RBP18.35■□□□□ 0.53
FNDC1-201ENST00000297267 UPF3BQ9BZI7 483 aaKnown RBP18.35■□□□□ 0.53
FNDC1-201ENST00000297267 USP5P45974 858 aa18.35■□□□□ 0.53
FNDC1-201ENST00000297267 TRERF1Q96PN7 1200 aa18.35■□□□□ 0.53
FNDC1-201ENST00000297267 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
FNDC1-201ENST00000297267 MAGEC2Q9UBF1 373 aaPredicted RBP18.35■□□□□ 0.53
FNDC1-201ENST00000297267 CDK13Q14004 1512 aaKnown RBP18.34■□□□□ 0.53
FNDC1-201ENST00000297267 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
FNDC1-201ENST00000297267 ARGLU1Q9NWB6 273 aaPredicted RBP18.34■□□□□ 0.53
FNDC1-201ENST00000297267 PROSER2Q86WR7 435 aaPredicted RBP18.33■□□□□ 0.53
FNDC1-201ENST00000297267 PTCD1O75127 700 aaKnown RBP18.33■□□□□ 0.53
FNDC1-201ENST00000297267 ENOX2Q16206 610 aaKnown RBP18.33■□□□□ 0.53
FNDC1-201ENST00000297267 ATF7IPQ6VMQ6 1270 aa18.33■□□□□ 0.53
FNDC1-201ENST00000297267 CBX1P83916 185 aa18.33■□□□□ 0.53
FNDC1-201ENST00000297267 BOLA2Q9H3K6 86 aa18.33■□□□□ 0.53
FNDC1-201ENST00000297267 CCDC173Q0VFZ6 552 aa18.33■□□□□ 0.52
FNDC1-201ENST00000297267 H0YHG0 523 aa18.33■□□□□ 0.52
FNDC1-201ENST00000297267 HSP90B2PQ58FF3 399 aa18.32■□□□□ 0.52
FNDC1-201ENST00000297267 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
FNDC1-201ENST00000297267 MPHOSPH10O00566 681 aaKnown RBP18.32■□□□□ 0.52
FNDC1-201ENST00000297267 SPATA32Q96LK8 384 aa18.32■□□□□ 0.52
FNDC1-201ENST00000297267 NSD3Q9BZ95 1437 aa18.32■□□□□ 0.52
FNDC1-201ENST00000297267 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
FNDC1-201ENST00000297267 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
FNDC1-201ENST00000297267 TAF3Q5VWG9 929 aa18.32■□□□□ 0.52
FNDC1-201ENST00000297267 IDH1O75874 414 aaKnown RBP18.31■□□□□ 0.52
FNDC1-201ENST00000297267 GNAI3P08754 354 aa18.31■□□□□ 0.52
FNDC1-201ENST00000297267 PRPF40BQ6NWY9 871 aaKnown RBP18.31■□□□□ 0.52
FNDC1-201ENST00000297267 SSFA2P28290 1259 aa18.31■□□□□ 0.52
FNDC1-201ENST00000297267 XBP1P17861 261 aa18.31■□□□□ 0.52
FNDC1-201ENST00000297267 RABEP1Q15276 862 aa18.31■□□□□ 0.52
FNDC1-201ENST00000297267 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
FNDC1-201ENST00000297267 SCAPERQ9BY12 1400 aa18.3■□□□□ 0.52
FNDC1-201ENST00000297267 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
FNDC1-201ENST00000297267 HSP90AB3PQ58FF7 597 aa18.29■□□□□ 0.52
FNDC1-201ENST00000297267 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
FNDC1-201ENST00000297267 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
FNDC1-201ENST00000297267 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
FNDC1-201ENST00000297267 SART3Q15020 963 aaKnown RBP18.29■□□□□ 0.52
FNDC1-201ENST00000297267 KLHL10Q6JEL2 608 aa18.29■□□□□ 0.52
FNDC1-201ENST00000297267 MYD88Q99836 296 aa18.29■□□□□ 0.52
FNDC1-201ENST00000297267 DEF6Q9H4E7 631 aa18.29■□□□□ 0.52
FNDC1-201ENST00000297267 TRMT1Q9NXH9 659 aaKnown RBP18.29■□□□□ 0.52
FNDC1-201ENST00000297267 TDO2P48775 406 aa18.28■□□□□ 0.52
FNDC1-201ENST00000297267 TSPYL1Q9H0U9 437 aa18.28■□□□□ 0.52
FNDC1-201ENST00000297267 MATR3P43243 847 aaKnown RBP eCLIP18.28■□□□□ 0.52
FNDC1-201ENST00000297267 ZSCAN29Q8IWY8 852 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms