RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
PPP1CB-201ENST00000296122 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
PPP1CB-201ENST00000296122 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
PPP1CB-201ENST00000296122 TMEM94Q12767 1356 aa16.87■□□□□ 0.29
PPP1CB-201ENST00000296122 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
PPP1CB-201ENST00000296122 TRMT2AQ8IZ69 625 aaKnown RBP16.87■□□□□ 0.29
PPP1CB-201ENST00000296122 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
PPP1CB-201ENST00000296122 ZKSCAN2Q63HK3 967 aa16.87■□□□□ 0.29
PPP1CB-201ENST00000296122 ZNF142P52746 1687 aaPredicted RBP16.86■□□□□ 0.29
PPP1CB-201ENST00000296122 CLUAP1Q96AJ1 413 aa16.86■□□□□ 0.29
PPP1CB-201ENST00000296122 AEBP1Q8IUX7 1158 aa16.86■□□□□ 0.29
PPP1CB-201ENST00000296122 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
PPP1CB-201ENST00000296122 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
PPP1CB-201ENST00000296122 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
PPP1CB-201ENST00000296122 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
PPP1CB-201ENST00000296122 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
PPP1CB-201ENST00000296122 THUMPD2Q9BTF0 503 aaKnown RBP16.85■□□□□ 0.29
PPP1CB-201ENST00000296122 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
PPP1CB-201ENST00000296122 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
PPP1CB-201ENST00000296122 USP31Q70CQ4 1352 aa16.84■□□□□ 0.29
PPP1CB-201ENST00000296122 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
PPP1CB-201ENST00000296122 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.29
PPP1CB-201ENST00000296122 ANKRD26Q9UPS8 1709 aa16.83■□□□□ 0.29
PPP1CB-201ENST00000296122 HOXC9P31274 260 aa16.83■□□□□ 0.29
PPP1CB-201ENST00000296122 COG6Q9Y2V7 657 aa16.83■□□□□ 0.29
PPP1CB-201ENST00000296122 IFT57Q9NWB7 429 aa16.83■□□□□ 0.28
PPP1CB-201ENST00000296122 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
PPP1CB-201ENST00000296122 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
PPP1CB-201ENST00000296122 C20orf194Q5TEA3 1177 aa16.82■□□□□ 0.28
PPP1CB-201ENST00000296122 COL3A1P02461 1466 aaPredicted RBP16.82■□□□□ 0.28
PPP1CB-201ENST00000296122 EYA1Q99502 592 aa16.81■□□□□ 0.28
PPP1CB-201ENST00000296122 GCP02774 474 aa16.81■□□□□ 0.28
PPP1CB-201ENST00000296122 PANK1Q8TE04 598 aa16.81■□□□□ 0.28
PPP1CB-201ENST00000296122 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
PPP1CB-201ENST00000296122 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
PPP1CB-201ENST00000296122 DCTN1Q14203 1278 aa16.8■□□□□ 0.28
PPP1CB-201ENST00000296122 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
PPP1CB-201ENST00000296122 ZC3H6P61129 1189 aaKnown RBP16.8■□□□□ 0.28
PPP1CB-201ENST00000296122 ITPRIPQ8IWB1 547 aa16.8■□□□□ 0.28
PPP1CB-201ENST00000296122 IP6K1Q92551 441 aa16.8■□□□□ 0.28
PPP1CB-201ENST00000296122 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
PPP1CB-201ENST00000296122 MON2Q7Z3U7 1717 aa16.8■□□□□ 0.28
PPP1CB-201ENST00000296122 KIF24Q5T7B8 1368 aa16.79■□□□□ 0.28
PPP1CB-201ENST00000296122 MAP2P11137 1827 aaKnown RBP16.79■□□□□ 0.28
PPP1CB-201ENST00000296122 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
PPP1CB-201ENST00000296122 ARHGEF10O15013 1369 aa16.79■□□□□ 0.28
PPP1CB-201ENST00000296122 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
PPP1CB-201ENST00000296122 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
PPP1CB-201ENST00000296122 SHPRHQ149N8 1683 aa16.78■□□□□ 0.28
PPP1CB-201ENST00000296122 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
PPP1CB-201ENST00000296122 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
PPP1CB-201ENST00000296122 MCM10Q7L590 875 aa16.78■□□□□ 0.28
PPP1CB-201ENST00000296122 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
PPP1CB-201ENST00000296122 CENPQQ7L2Z9 268 aaPredicted RBP16.78■□□□□ 0.28
PPP1CB-201ENST00000296122 C1orf141Q5JVX7 400 aa16.77■□□□□ 0.28
PPP1CB-201ENST00000296122 AAMPQ13685 434 aa16.77■□□□□ 0.27
PPP1CB-201ENST00000296122 SSH2Q76I76 1423 aa16.77■□□□□ 0.27
PPP1CB-201ENST00000296122 AKAP12Q02952 1782 aa16.77■□□□□ 0.27
PPP1CB-201ENST00000296122 LRRC7Q96NW7 1537 aa16.77■□□□□ 0.27
PPP1CB-201ENST00000296122 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
PPP1CB-201ENST00000296122 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
PPP1CB-201ENST00000296122 CHD2O14647 1828 aaKnown RBP16.76■□□□□ 0.27
PPP1CB-201ENST00000296122 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
PPP1CB-201ENST00000296122 PLEKHO1Q53GL0 409 aaPredicted RBP16.76■□□□□ 0.27
PPP1CB-201ENST00000296122 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
PPP1CB-201ENST00000296122 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
PPP1CB-201ENST00000296122 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
PPP1CB-201ENST00000296122 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
PPP1CB-201ENST00000296122 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
PPP1CB-201ENST00000296122 TEFQ10587 303 aa16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 TCERG1O14776 1098 aaKnown RBP16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 MTHFSDQ2M296 383 aaKnown RBP16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 STK31Q9BXU1 1019 aa16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
PPP1CB-201ENST00000296122 FMN2Q9NZ56 1722 aa16.73■□□□□ 0.27
PPP1CB-201ENST00000296122 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
PPP1CB-201ENST00000296122 IGSF1Q8N6C5 1336 aa16.73■□□□□ 0.27
PPP1CB-201ENST00000296122 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
PPP1CB-201ENST00000296122 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
PPP1CB-201ENST00000296122 CHMP4AQ9BY43 222 aa16.73■□□□□ 0.27
PPP1CB-201ENST00000296122 TOPAZ1Q8N9V7 1692 aa16.72■□□□□ 0.27
PPP1CB-201ENST00000296122 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
PPP1CB-201ENST00000296122 NCOA3Q9Y6Q9 1424 aa16.72■□□□□ 0.27
PPP1CB-201ENST00000296122 ZNF530Q6P9A1 599 aaPredicted RBP16.72■□□□□ 0.27
PPP1CB-201ENST00000296122 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
PPP1CB-201ENST00000296122 DDX17Q92841 729 aaKnown RBP16.72■□□□□ 0.27
PPP1CB-201ENST00000296122 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
PPP1CB-201ENST00000296122 RGS3P49796 1198 aa16.71■□□□□ 0.27
PPP1CB-201ENST00000296122 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
PPP1CB-201ENST00000296122 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
PPP1CB-201ENST00000296122 AMOTQ4VCS5 1084 aa16.7■□□□□ 0.26
PPP1CB-201ENST00000296122 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
PPP1CB-201ENST00000296122 MVPQ14764 893 aaKnown RBP16.7■□□□□ 0.26
PPP1CB-201ENST00000296122 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
PPP1CB-201ENST00000296122 DCCP43146 1447 aa16.69■□□□□ 0.26
PPP1CB-201ENST00000296122 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
PPP1CB-201ENST00000296122 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms