RNA–Protein interactions for RNA: ENST00000295925.5

CCNL1-201, Transcript of cyclin L1, humanhuman

TSL 1 (best) BASIC

Gene CCNL1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-201ENST00000295925 COL5A2P05997 1499 aaPredicted RBP22.48■■□□□ 1.19
CCNL1-201ENST00000295925 EVA1CP58658 441 aa22.48■■□□□ 1.19
CCNL1-201ENST00000295925 VPS72Q15906 364 aa22.48■■□□□ 1.19
CCNL1-201ENST00000295925 GJD4Q96KN9 370 aaPredicted RBP22.47■■□□□ 1.19
CCNL1-201ENST00000295925 RRS1Q15050 365 aaKnown RBP22.46■■□□□ 1.19
CCNL1-201ENST00000295925 AXIN2Q9Y2T1 843 aa22.46■■□□□ 1.19
CCNL1-201ENST00000295925 MAP3K19Q56UN5 1328 aa22.45■■□□□ 1.18
CCNL1-201ENST00000295925 RGS12O14924 1447 aa22.45■■□□□ 1.18
CCNL1-201ENST00000295925 ABCC6O95255 1503 aa22.45■■□□□ 1.18
CCNL1-201ENST00000295925 TNNT2P45379 298 aaPredicted RBP22.44■■□□□ 1.18
CCNL1-201ENST00000295925 LARP1Q6PKG0 1096 aaKnown RBP22.44■■□□□ 1.18
CCNL1-201ENST00000295925 NSD2O96028 1365 aa22.43■■□□□ 1.18
CCNL1-201ENST00000295925 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
CCNL1-201ENST00000295925 USP35Q9P2H5 1018 aa22.43■■□□□ 1.18
CCNL1-201ENST00000295925 MAP2P11137 1827 aaKnown RBP22.43■■□□□ 1.18
CCNL1-201ENST00000295925 PEAK1Q9H792 1746 aa22.43■■□□□ 1.18
CCNL1-201ENST00000295925 SPATA31A5Q5VU36 1347 aa22.42■■□□□ 1.18
CCNL1-201ENST00000295925 SPATA31A7Q8IWB4 1347 aa22.42■■□□□ 1.18
CCNL1-201ENST00000295925 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
CCNL1-201ENST00000295925 CSB-PGBD3P0DP91 1061 aa22.41■■□□□ 1.18
CCNL1-201ENST00000295925 AMPHP49418 695 aa22.41■■□□□ 1.18
CCNL1-201ENST00000295925 AMER1Q5JTC6 1135 aaPredicted RBP22.41■■□□□ 1.18
CCNL1-201ENST00000295925 PER1O15534 1290 aaPredicted RBP22.4■■□□□ 1.18
CCNL1-201ENST00000295925 CC2D1BQ5T0F9 858 aaKnown RBP22.4■■□□□ 1.18
CCNL1-201ENST00000295925 SPATA31A1Q5TZJ5 1347 aa22.39■■□□□ 1.18
CCNL1-201ENST00000295925 A0A0G2JS52 829 aa22.39■■□□□ 1.17
CCNL1-201ENST00000295925 MYT1Q01538 1121 aa22.39■■□□□ 1.17
CCNL1-201ENST00000295925 MORC1Q86VD1 984 aa22.39■■□□□ 1.17
CCNL1-201ENST00000295925 HOXC9P31274 260 aa22.38■■□□□ 1.17
CCNL1-201ENST00000295925 FAM98CQ17RN3 349 aaKnown RBP22.38■■□□□ 1.17
CCNL1-201ENST00000295925 TOM1L2Q6ZVM7 507 aa22.38■■□□□ 1.17
CCNL1-201ENST00000295925 IP6K1Q92551 441 aa22.38■■□□□ 1.17
CCNL1-201ENST00000295925 LTV1Q96GA3 475 aaPredicted RBP22.38■■□□□ 1.17
CCNL1-201ENST00000295925 EMILIN1Q9Y6C2 1016 aa22.38■■□□□ 1.17
CCNL1-201ENST00000295925 CRB1P82279 1406 aa22.38■■□□□ 1.17
CCNL1-201ENST00000295925 WDR17Q8IZU2 1322 aa22.37■■□□□ 1.17
CCNL1-201ENST00000295925 BRWD3Q6RI45 1802 aa22.37■■□□□ 1.17
CCNL1-201ENST00000295925 PPM1GO15355 546 aaPredicted RBP22.37■■□□□ 1.17
CCNL1-201ENST00000295925 BLMP54132 1417 aaPredicted RBP22.37■■□□□ 1.17
CCNL1-201ENST00000295925 RTL1A6NKG5 1358 aa22.37■■□□□ 1.17
CCNL1-201ENST00000295925 ANKRD24Q8TF21 1146 aa22.36■■□□□ 1.17
CCNL1-201ENST00000295925 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
CCNL1-201ENST00000295925 ERBB3P21860 1342 aa22.35■■□□□ 1.17
CCNL1-201ENST00000295925 WNK3Q9BYP7 1800 aa22.35■■□□□ 1.17
CCNL1-201ENST00000295925 THSD7AQ9UPZ6 1657 aa22.34■■□□□ 1.17
CCNL1-201ENST00000295925 FLT4P35916 1363 aa22.34■■□□□ 1.17
CCNL1-201ENST00000295925 FAM208AQ9UK61 1670 aaKnown RBP22.33■■□□□ 1.17
CCNL1-201ENST00000295925 SEPT12Q8IYM1 358 aa22.33■■□□□ 1.17
CCNL1-201ENST00000295925 TCP11L2Q8N4U5 519 aa22.33■■□□□ 1.17
CCNL1-201ENST00000295925 NLRP2Q9NX02 1062 aa22.33■■□□□ 1.17
CCNL1-201ENST00000295925 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
CCNL1-201ENST00000295925 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
CCNL1-201ENST00000295925 POLKQ9UBT6 870 aa22.31■■□□□ 1.16
CCNL1-201ENST00000295925 NPC1L1Q9UHC9 1359 aa22.3■■□□□ 1.16
CCNL1-201ENST00000295925 KIF24Q5T7B8 1368 aa22.29■■□□□ 1.16
CCNL1-201ENST00000295925 CARD10Q9BWT7 1032 aa22.29■■□□□ 1.16
CCNL1-201ENST00000295925 SMG6Q86US8 1419 aaKnown RBP22.29■■□□□ 1.16
CCNL1-201ENST00000295925 INSRP06213 1382 aa22.28■■□□□ 1.16
CCNL1-201ENST00000295925 ONECUT3O60422 494 aaPredicted RBP22.28■■□□□ 1.16
CCNL1-201ENST00000295925 BARGINQ6ZT62 677 aa22.28■■□□□ 1.16
CCNL1-201ENST00000295925 THRAP3Q9Y2W1 955 aaKnown RBP22.27■■□□□ 1.16
CCNL1-201ENST00000295925 PARP4Q9UKK3 1724 aaKnown RBP22.26■■□□□ 1.15
CCNL1-201ENST00000295925 LRRC37A3O60309 1634 aa22.26■■□□□ 1.15
CCNL1-201ENST00000295925 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
CCNL1-201ENST00000295925 KRT27Q7Z3Y8 459 aa22.23■■□□□ 1.15
CCNL1-201ENST00000295925 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
CCNL1-201ENST00000295925 DISP2A7MBM2 1401 aa22.22■■□□□ 1.15
CCNL1-201ENST00000295925 SOCS7O14512 581 aa22.21■■□□□ 1.15
CCNL1-201ENST00000295925 NBPF6Q5VWK0 638 aa22.21■■□□□ 1.15
CCNL1-201ENST00000295925 NBPF4Q96M43 638 aa22.21■■□□□ 1.15
CCNL1-201ENST00000295925 MTHFSP49914 203 aa22.2■■□□□ 1.14
CCNL1-201ENST00000295925 FAM182BQ5T319 152 aa22.2■■□□□ 1.14
CCNL1-201ENST00000295925 EIF4A2Q14240 407 aaKnown RBP22.19■■□□□ 1.14
CCNL1-201ENST00000295925 IL2RBP14784 551 aa22.18■■□□□ 1.14
CCNL1-201ENST00000295925 PDE3BQ13370 1112 aa22.17■■□□□ 1.14
CCNL1-201ENST00000295925 DDB1Q16531 1140 aa22.17■■□□□ 1.14
CCNL1-201ENST00000295925 CDCA7Q9BWT1 371 aaPredicted RBP22.17■■□□□ 1.14
CCNL1-201ENST00000295925 MEGF6O75095 1541 aa22.16■■□□□ 1.14
CCNL1-201ENST00000295925 TNS2Q63HR2 1409 aa22.14■■□□□ 1.14
CCNL1-201ENST00000295925 PPP2R1AP30153 589 aa22.14■■□□□ 1.13
CCNL1-201ENST00000295925 EYA1Q99502 592 aa22.14■■□□□ 1.13
CCNL1-201ENST00000295925 PARD3Q8TEW0 1356 aa22.13■■□□□ 1.13
CCNL1-201ENST00000295925 EXOC5O00471 708 aa22.12■■□□□ 1.13
CCNL1-201ENST00000295925 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
CCNL1-201ENST00000295925 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
CCNL1-201ENST00000295925 COL3A1P02461 1466 aaPredicted RBP22.11■■□□□ 1.13
CCNL1-201ENST00000295925 RAPGEF4Q8WZA2 1011 aa22.11■■□□□ 1.13
CCNL1-201ENST00000295925 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
CCNL1-201ENST00000295925 OVOS2A0A0G2JMS6 1433 aa22.1■■□□□ 1.13
CCNL1-201ENST00000295925 NCAPD2Q15021 1401 aa22.1■■□□□ 1.13
CCNL1-201ENST00000295925 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
CCNL1-201ENST00000295925 IL13P35225 146 aa22.09■■□□□ 1.13
CCNL1-201ENST00000295925 DIAPH1O60610 1272 aaKnown RBP22.08■■□□□ 1.13
CCNL1-201ENST00000295925 TATP17735 454 aaPredicted RBP22.08■■□□□ 1.13
CCNL1-201ENST00000295925 MARCH10Q8NA82 808 aaPredicted RBP22.08■■□□□ 1.13
CCNL1-201ENST00000295925 AEBP1Q8IUX7 1158 aa22.07■■□□□ 1.12
CCNL1-201ENST00000295925 FAM196AQ6ZSG2 479 aa22.06■■□□□ 1.12
CCNL1-201ENST00000295925 CFAP53Q96M91 514 aa22.06■■□□□ 1.12
CCNL1-201ENST00000295925 SBF2Q86WG5 1849 aa22.06■■□□□ 1.12
CCNL1-201ENST00000295925 PKD1L3Q7Z443 1732 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms