RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
PKNOX1-201ENST00000291547 KINO60870 393 aaKnown RBP12.84□□□□□ -0.35
PKNOX1-201ENST00000291547 TRIM34Q9BYJ4 488 aa12.84□□□□□ -0.35
PKNOX1-201ENST00000291547 EPS15P42566 896 aa12.84□□□□□ -0.35
PKNOX1-201ENST00000291547 CFAP70Q5T0N1 1121 aa12.84□□□□□ -0.35
PKNOX1-201ENST00000291547 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
PKNOX1-201ENST00000291547 HSP90AB4PQ58FF6 505 aa12.84□□□□□ -0.35
PKNOX1-201ENST00000291547 CCP110O43303 1012 aa12.83□□□□□ -0.36
PKNOX1-201ENST00000291547 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
PKNOX1-201ENST00000291547 SPC24Q8NBT2 197 aa12.83□□□□□ -0.36
PKNOX1-201ENST00000291547 PANK1Q8TE04 598 aa12.83□□□□□ -0.36
PKNOX1-201ENST00000291547 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
PKNOX1-201ENST00000291547 MYO5CQ9NQX4 1742 aa12.83□□□□□ -0.36
PKNOX1-201ENST00000291547 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 DIAPH1O60610 1272 aaKnown RBP12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 VPS37DQ86XT2 251 aa12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 RPGRIP1LQ68CZ1 1315 aa12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 CCDC112Q8NEF3 446 aa12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 ADGRL2O95490 1459 aa12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 KIAA0754O94854 1291 aa12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 MPNDQ8N594 471 aa12.82□□□□□ -0.36
PKNOX1-201ENST00000291547 FIBPO43427 364 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 NEK4P51957 841 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 FILIP1LQ4L180 1135 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 TMEM132EQ6IEE7 984 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 SMARCE1Q969G3 411 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 BRPF1P55201 1214 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 AAMPQ13685 434 aa12.81□□□□□ -0.36
PKNOX1-201ENST00000291547 WASHC4Q2M389 1173 aa12.8□□□□□ -0.36
PKNOX1-201ENST00000291547 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
PKNOX1-201ENST00000291547 PSMA5P28066 241 aa12.8□□□□□ -0.36
PKNOX1-201ENST00000291547 BRMS1Q9HCU9 246 aa12.8□□□□□ -0.36
PKNOX1-201ENST00000291547 NEFHP12036 1026 aa12.8□□□□□ -0.36
PKNOX1-201ENST00000291547 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
PKNOX1-201ENST00000291547 PDCP20941 246 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 TXNDC2Q86VQ3 553 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 NEO1Q92859 1461 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 TTC37Q6PGP7 1564 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 XBP1P17861 261 aa12.79□□□□□ -0.36
PKNOX1-201ENST00000291547 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 GOLGA6L7A0A1B0GV03 622 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 FAM135AQ9P2D6 1515 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 ARHGEF5Q12774 1597 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 UQCRHLA0A096LP55 91 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 KDM4AO75164 1064 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 UQCRHP07919 91 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 GNAI1P63096 354 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 GTPBP4Q9BZE4 634 aaKnown RBP12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 GOLGA6L10A6NI86 522 aa12.78□□□□□ -0.36
PKNOX1-201ENST00000291547 MCM2P49736 904 aa12.77□□□□□ -0.37
PKNOX1-201ENST00000291547 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
PKNOX1-201ENST00000291547 GRPEL1Q9HAV7 217 aa12.77□□□□□ -0.37
PKNOX1-201ENST00000291547 SAMD1Q6SPF0 538 aaPredicted RBP12.77□□□□□ -0.37
PKNOX1-201ENST00000291547 RABEP1Q15276 862 aa12.77□□□□□ -0.37
PKNOX1-201ENST00000291547 ERLIN1O75477 346 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 FBXO31Q5XUX0 539 aaPredicted RBP12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 CCDC192P0DO97 292 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 USP8P40818 1118 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 STK38Q15208 465 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 DHX37Q8IY37 1157 aaKnown RBP12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 EIF3JO75822 258 aaKnown RBP12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 ERLIN2O94905 339 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 SERPINC1P01008 464 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 ZSCAN30Q86W11 494 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 FSD1Q9BTV5 496 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 MBD5Q9P267 1494 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 CFAP74Q9C0B2 1584 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 ZRSR2Q15696 482 aaKnown RBP12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 TSPYL4Q9UJ04 414 aa12.76□□□□□ -0.37
PKNOX1-201ENST00000291547 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
PKNOX1-201ENST00000291547 UBTFL1P0CB47 393 aaPredicted RBP12.75□□□□□ -0.37
PKNOX1-201ENST00000291547 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
PKNOX1-201ENST00000291547 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
PKNOX1-201ENST00000291547 FAM177A1Q8N128 213 aaPredicted RBP12.75□□□□□ -0.37
PKNOX1-201ENST00000291547 DEF6Q9H4E7 631 aa12.75□□□□□ -0.37
PKNOX1-201ENST00000291547 IDI1Q13907 227 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 NINLQ9Y2I6 1382 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 ADGBQ8N7X0 1667 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 ERICH4A6NGS2 130 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 FYB1O15117 783 aa12.74□□□□□ -0.37
PKNOX1-201ENST00000291547 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms