RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 EVA1CP58658 441 aa27.3■■□□□ 1.96
TIMP4-201ENST00000287814 LARP1Q6PKG0 1096 aaKnown RBP27.29■■□□□ 1.96
TIMP4-201ENST00000287814 COL5A2P05997 1499 aaPredicted RBP27.29■■□□□ 1.96
TIMP4-201ENST00000287814 GLI3P10071 1580 aa27.29■■□□□ 1.96
TIMP4-201ENST00000287814 MAP3K19Q56UN5 1328 aa27.28■■□□□ 1.96
TIMP4-201ENST00000287814 RRS1Q15050 365 aaKnown RBP27.28■■□□□ 1.96
TIMP4-201ENST00000287814 AMER1Q5JTC6 1135 aaPredicted RBP27.28■■□□□ 1.96
TIMP4-201ENST00000287814 SPATA31A5Q5VU36 1347 aa27.27■■□□□ 1.96
TIMP4-201ENST00000287814 SPATA31A7Q8IWB4 1347 aa27.27■■□□□ 1.96
TIMP4-201ENST00000287814 LTN1O94822 1766 aa27.25■■□□□ 1.95
TIMP4-201ENST00000287814 RGS12O14924 1447 aa27.24■■□□□ 1.95
TIMP4-201ENST00000287814 IP6K1Q92551 441 aa27.24■■□□□ 1.95
TIMP4-201ENST00000287814 SPATA31A1Q5TZJ5 1347 aa27.23■■□□□ 1.95
TIMP4-201ENST00000287814 RGPD5Q99666 1765 aa27.23■■□□□ 1.95
TIMP4-201ENST00000287814 CDK12Q9NYV4 1490 aaPredicted RBP27.23■■□□□ 1.95
TIMP4-201ENST00000287814 TNNT2P45379 298 aaPredicted RBP27.22■■□□□ 1.95
TIMP4-201ENST00000287814 NSD2O96028 1365 aa27.22■■□□□ 1.95
TIMP4-201ENST00000287814 ABCC6O95255 1503 aa27.21■■□□□ 1.95
TIMP4-201ENST00000287814 USP35Q9P2H5 1018 aa27.21■■□□□ 1.95
TIMP4-201ENST00000287814 ONECUT3O60422 494 aaPredicted RBP27.21■■□□□ 1.95
TIMP4-201ENST00000287814 HOXC9P31274 260 aa27.21■■□□□ 1.95
TIMP4-201ENST00000287814 FAM98CQ17RN3 349 aaKnown RBP27.21■■□□□ 1.95
TIMP4-201ENST00000287814 AMPHP49418 695 aa27.2■■□□□ 1.94
TIMP4-201ENST00000287814 EMILIN1Q9Y6C2 1016 aa27.2■■□□□ 1.94
TIMP4-201ENST00000287814 WDR17Q8IZU2 1322 aa27.2■■□□□ 1.94
TIMP4-201ENST00000287814 MORC1Q86VD1 984 aa27.18■■□□□ 1.94
TIMP4-201ENST00000287814 ANKRD26Q9UPS8 1709 aa27.18■■□□□ 1.94
TIMP4-201ENST00000287814 ERBB3P21860 1342 aa27.17■■□□□ 1.94
TIMP4-201ENST00000287814 CRB1P82279 1406 aa27.17■■□□□ 1.94
TIMP4-201ENST00000287814 CC2D1BQ5T0F9 858 aaKnown RBP27.17■■□□□ 1.94
TIMP4-201ENST00000287814 CSB-PGBD3P0DP91 1061 aa27.17■■□□□ 1.94
TIMP4-201ENST00000287814 TOM1L2Q6ZVM7 507 aa27.17■■□□□ 1.94
TIMP4-201ENST00000287814 ANKRD24Q8TF21 1146 aa27.17■■□□□ 1.94
TIMP4-201ENST00000287814 POLKQ9UBT6 870 aa27.17■■□□□ 1.94
TIMP4-201ENST00000287814 SEPT12Q8IYM1 358 aa27.16■■□□□ 1.94
TIMP4-201ENST00000287814 BLMP54132 1417 aaPredicted RBP27.15■■□□□ 1.94
TIMP4-201ENST00000287814 CNGB1Q14028 1251 aaPredicted RBP27.15■■□□□ 1.94
TIMP4-201ENST00000287814 LTV1Q96GA3 475 aaPredicted RBP27.15■■□□□ 1.94
TIMP4-201ENST00000287814 PEAK1Q9H792 1746 aa27.15■■□□□ 1.94
TIMP4-201ENST00000287814 HSP90AB2PQ58FF8 381 aa27.14■■□□□ 1.94
TIMP4-201ENST00000287814 TCP11L2Q8N4U5 519 aa27.14■■□□□ 1.94
TIMP4-201ENST00000287814 RTL1A6NKG5 1358 aa27.14■■□□□ 1.94
TIMP4-201ENST00000287814 PPM1GO15355 546 aaPredicted RBP27.12■■□□□ 1.93
TIMP4-201ENST00000287814 CARD10Q9BWT7 1032 aa27.12■■□□□ 1.93
TIMP4-201ENST00000287814 NPC1L1Q9UHC9 1359 aa27.12■■□□□ 1.93
TIMP4-201ENST00000287814 BARGINQ6ZT62 677 aa27.11■■□□□ 1.93
TIMP4-201ENST00000287814 FLT4P35916 1363 aa27.11■■□□□ 1.93
TIMP4-201ENST00000287814 DDX10Q13206 875 aaKnown RBP27.11■■□□□ 1.93
TIMP4-201ENST00000287814 KIF24Q5T7B8 1368 aa27.1■■□□□ 1.93
TIMP4-201ENST00000287814 NLRP2Q9NX02 1062 aa27.1■■□□□ 1.93
TIMP4-201ENST00000287814 THRAP3Q9Y2W1 955 aaKnown RBP27.1■■□□□ 1.93
TIMP4-201ENST00000287814 MAP2P11137 1827 aaKnown RBP27.09■■□□□ 1.93
TIMP4-201ENST00000287814 A0A0G2JS52 829 aa27.09■■□□□ 1.93
TIMP4-201ENST00000287814 MYT1Q01538 1121 aa27.09■■□□□ 1.93
TIMP4-201ENST00000287814 INSRP06213 1382 aa27.09■■□□□ 1.93
TIMP4-201ENST00000287814 THSD7AQ9UPZ6 1657 aa27.06■■□□□ 1.92
TIMP4-201ENST00000287814 SOCS7O14512 581 aa27.06■■□□□ 1.92
TIMP4-201ENST00000287814 BRWD3Q6RI45 1802 aa27.04■■□□□ 1.92
TIMP4-201ENST00000287814 SMG6Q86US8 1419 aaKnown RBP27.03■■□□□ 1.92
TIMP4-201ENST00000287814 NBPF6Q5VWK0 638 aa27.03■■□□□ 1.92
TIMP4-201ENST00000287814 NBPF4Q96M43 638 aa27.03■■□□□ 1.92
TIMP4-201ENST00000287814 ZNF316A6NFI3 1004 aaPredicted RBP27.02■■□□□ 1.92
TIMP4-201ENST00000287814 KRT27Q7Z3Y8 459 aa27.01■■□□□ 1.92
TIMP4-201ENST00000287814 DISP2A7MBM2 1401 aa27■■□□□ 1.91
TIMP4-201ENST00000287814 EP400Q96L91 3159 aa26.99■■□□□ 1.91
TIMP4-201ENST00000287814 MTHFSP49914 203 aa26.99■■□□□ 1.91
TIMP4-201ENST00000287814 FAM182BQ5T319 152 aa26.99■■□□□ 1.91
TIMP4-201ENST00000287814 USHBP1Q8N6Y0 703 aa26.99■■□□□ 1.91
TIMP4-201ENST00000287814 RGPD2P0DJD1 1756 aa26.99■■□□□ 1.91
TIMP4-201ENST00000287814 EIF4A2Q14240 407 aaKnown RBP26.98■■□□□ 1.91
TIMP4-201ENST00000287814 FAM208AQ9UK61 1670 aaKnown RBP26.96■■□□□ 1.91
TIMP4-201ENST00000287814 CDCA7Q9BWT1 371 aaPredicted RBP26.95■■□□□ 1.91
TIMP4-201ENST00000287814 IL2RBP14784 551 aa26.95■■□□□ 1.9
TIMP4-201ENST00000287814 EYA1Q99502 592 aa26.95■■□□□ 1.9
TIMP4-201ENST00000287814 DDB1Q16531 1140 aa26.94■■□□□ 1.9
TIMP4-201ENST00000287814 PARP4Q9UKK3 1724 aaKnown RBP26.94■■□□□ 1.9
TIMP4-201ENST00000287814 WNK3Q9BYP7 1800 aa26.94■■□□□ 1.9
TIMP4-201ENST00000287814 PDE3BQ13370 1112 aa26.93■■□□□ 1.9
TIMP4-201ENST00000287814 UPF1Q92900 1129 aaKnown RBP eCLIP26.93■■□□□ 1.9
TIMP4-201ENST00000287814 LRRC37A3O60309 1634 aa26.91■■□□□ 1.9
TIMP4-201ENST00000287814 EXOC5O00471 708 aa26.9■■□□□ 1.9
TIMP4-201ENST00000287814 PPP2R1AP30153 589 aa26.9■■□□□ 1.9
TIMP4-201ENST00000287814 IL13P35225 146 aa26.89■■□□□ 1.89
TIMP4-201ENST00000287814 PARD3Q8TEW0 1356 aa26.89■■□□□ 1.89
TIMP4-201ENST00000287814 MEGF6O75095 1541 aa26.88■■□□□ 1.89
TIMP4-201ENST00000287814 NCAPD2Q15021 1401 aa26.88■■□□□ 1.89
TIMP4-201ENST00000287814 MARCH10Q8NA82 808 aaPredicted RBP26.88■■□□□ 1.89
TIMP4-201ENST00000287814 TNS2Q63HR2 1409 aa26.85■■□□□ 1.89
TIMP4-201ENST00000287814 IGSF1Q8N6C5 1336 aa26.85■■□□□ 1.89
TIMP4-201ENST00000287814 RAPGEF4Q8WZA2 1011 aa26.84■■□□□ 1.89
TIMP4-201ENST00000287814 OVOS2A0A0G2JMS6 1433 aa26.83■■□□□ 1.89
TIMP4-201ENST00000287814 FAM196AQ6ZSG2 479 aa26.82■■□□□ 1.88
TIMP4-201ENST00000287814 COL3A1P02461 1466 aaPredicted RBP26.82■■□□□ 1.88
TIMP4-201ENST00000287814 DIAPH1O60610 1272 aaKnown RBP26.81■■□□□ 1.88
TIMP4-201ENST00000287814 TATP17735 454 aaPredicted RBP26.81■■□□□ 1.88
TIMP4-201ENST00000287814 AEBP1Q8IUX7 1158 aa26.81■■□□□ 1.88
TIMP4-201ENST00000287814 ZCRB1Q8TBF4 217 aaKnown RBP26.8■■□□□ 1.88
TIMP4-201ENST00000287814 RALBP1Q15311 655 aa26.79■■□□□ 1.88
TIMP4-201ENST00000287814 DDX54Q8TDD1 881 aaKnown RBP26.79■■□□□ 1.88
TIMP4-201ENST00000287814 SULT6B1Q6IMI4 303 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms