RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 DISP1Q96F81 1524 aa12□□□□□ -0.49
HMBOX1-201ENST00000287701 VGLL3A8MV65 326 aa12□□□□□ -0.49
HMBOX1-201ENST00000287701 TBC1D9Q6ZT07 1266 aa12□□□□□ -0.49
HMBOX1-201ENST00000287701 GCC1Q96CN9 775 aa11.99□□□□□ -0.49
HMBOX1-201ENST00000287701 MED14O60244 1454 aa11.99□□□□□ -0.49
HMBOX1-201ENST00000287701 SPHKAPQ2M3C7 1700 aa11.99□□□□□ -0.49
HMBOX1-201ENST00000287701 NOS1P29475 1434 aa11.99□□□□□ -0.49
HMBOX1-201ENST00000287701 MAST1Q9Y2H9 1570 aa11.99□□□□□ -0.49
HMBOX1-201ENST00000287701 MAP3K4Q9Y6R4 1608 aa11.99□□□□□ -0.49
HMBOX1-201ENST00000287701 TERF2Q15554 542 aa11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 KIAA1524Q8TCG1 905 aa11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 USP32Q8NFA0 1604 aa11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 RIOK3O14730 519 aaKnown RBP11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 CDC45O75419 566 aa11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 KCNJ4P48050 445 aa11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 ZDHHC9Q9Y397 364 aa11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 FAM53CQ9NYF3 392 aa11.98□□□□□ -0.49
HMBOX1-201ENST00000287701 TRIM27P14373 513 aa11.97□□□□□ -0.49
HMBOX1-201ENST00000287701 ATF7IPQ6VMQ6 1270 aa11.97□□□□□ -0.49
HMBOX1-201ENST00000287701 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
HMBOX1-201ENST00000287701 YY1AP1Q9H869 796 aa11.96□□□□□ -0.49
HMBOX1-201ENST00000287701 MYOM2P54296 1465 aa11.96□□□□□ -0.49
HMBOX1-201ENST00000287701 ABCC11Q96J66 1382 aa11.96□□□□□ -0.49
HMBOX1-201ENST00000287701 NCBP1Q09161 790 aaKnown RBP11.96□□□□□ -0.5
HMBOX1-201ENST00000287701 TCP11L2Q8N4U5 519 aa11.96□□□□□ -0.5
HMBOX1-201ENST00000287701 ZBTB22O15209 634 aa11.95□□□□□ -0.5
HMBOX1-201ENST00000287701 TSPOAP1O95153 1857 aa11.95□□□□□ -0.5
HMBOX1-201ENST00000287701 ST18O60284 1047 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 TSPY4P0CV99 314 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 TSPY10P0CW01 314 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 BCL2L13Q9BXK5 485 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 USP25Q9UHP3 1055 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 NSFL1CQ9UNZ2 370 aaKnown RBP11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 ATAD2Q6PL18 1390 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 PKP1Q13835 747 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 ITPRIPQ8IWB1 547 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 RNF214Q8ND24 703 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 JPH4Q96JJ6 628 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
HMBOX1-201ENST00000287701 PAXIP1Q6ZW49 1069 aaPredicted RBP11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 KRT222Q8N1A0 295 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 PLCD3Q8N3E9 789 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 MYO3AQ8NEV4 1616 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 SMTNL1A8MU46 457 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 ADCY5O95622 1261 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 EFCC1Q9HA90 598 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 NEURL4Q96JN8 1562 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 BRD1O95696 1058 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 KIF18AQ8NI77 898 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 TTC12Q9H892 705 aaPredicted RBP11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 IL16Q14005 1332 aa11.93□□□□□ -0.5
HMBOX1-201ENST00000287701 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
HMBOX1-201ENST00000287701 BRPF1P55201 1214 aaPredicted RBP11.92□□□□□ -0.5
HMBOX1-201ENST00000287701 RGL3Q3MIN7 710 aa11.92□□□□□ -0.5
HMBOX1-201ENST00000287701 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
HMBOX1-201ENST00000287701 RGS22Q8NE09 1264 aa11.92□□□□□ -0.5
HMBOX1-201ENST00000287701 SMC4Q9NTJ3 1288 aa11.92□□□□□ -0.5
HMBOX1-201ENST00000287701 KDM4AO75164 1064 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 CAPN2P17655 700 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 TMEM87AQ8NBN3 555 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 ERVK-7P63135 1459 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 IGSF3O75054 1194 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 PPIP5K1Q6PFW1 1433 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 FAM177BA6PVY3 158 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 GOLGA6L6A8MZA4 724 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 TMEM57Q8N5G2 664 aa11.91□□□□□ -0.5
HMBOX1-201ENST00000287701 MCM2P49736 904 aa11.9□□□□□ -0.5
HMBOX1-201ENST00000287701 ABCA6Q8N139 1617 aa11.9□□□□□ -0.5
HMBOX1-201ENST00000287701 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
HMBOX1-201ENST00000287701 SLFNL1Q499Z3 407 aa11.9□□□□□ -0.5
HMBOX1-201ENST00000287701 ZNF777Q9ULD5 760 aaPredicted RBP11.9□□□□□ -0.5
HMBOX1-201ENST00000287701 MMP14P50281 582 aa11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 SBNO2Q9Y2G9 1366 aa11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 INTS4Q96HW7 963 aaKnown RBP11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 KCNF1Q9H3M0 494 aa11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 ZNF397Q8NF99 534 aaPredicted RBP11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
HMBOX1-201ENST00000287701 CUL4AQ13619 759 aa11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 CARD14Q9BXL6 1004 aa11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 GEMIN8Q9NWZ8 242 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 INO80Q9ULG1 1556 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 ARID3CA6NKF2 412 aa11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 INTS3Q68E01 1043 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
HMBOX1-201ENST00000287701 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
HMBOX1-201ENST00000287701 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
HMBOX1-201ENST00000287701 PYCARDQ9ULZ3 195 aa11.87□□□□□ -0.51
HMBOX1-201ENST00000287701 CYP2C19P33261 490 aa11.87□□□□□ -0.51
HMBOX1-201ENST00000287701 RRP7AQ9Y3A4 280 aaKnown RBP11.87□□□□□ -0.51
HMBOX1-201ENST00000287701 KIF1BPQ96EK5 621 aa11.86□□□□□ -0.51
HMBOX1-201ENST00000287701 FEZ2Q9UHY8 353 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms