RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 GOLGA6L10A0A0M3HER8 536 aa17.82■□□□□ 0.44
NID1-201ENST00000264187 GRPEL1Q9HAV7 217 aa17.81■□□□□ 0.44
NID1-201ENST00000264187 GNAI2P04899 355 aa17.81■□□□□ 0.44
NID1-201ENST00000264187 KRT85P78386 507 aa17.81■□□□□ 0.44
NID1-201ENST00000264187 TWISTNBQ3B726 338 aaPredicted RBP17.81■□□□□ 0.44
NID1-201ENST00000264187 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
NID1-201ENST00000264187 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
NID1-201ENST00000264187 KIAA1328Q86T90 577 aa17.8■□□□□ 0.44
NID1-201ENST00000264187 SPATA32Q96LK8 384 aa17.8■□□□□ 0.44
NID1-201ENST00000264187 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.8■□□□□ 0.44
NID1-201ENST00000264187 GNL3LQ9NVN8 582 aaKnown RBP17.79■□□□□ 0.44
NID1-201ENST00000264187 EIF5P55010 431 aaKnown RBP17.79■□□□□ 0.44
NID1-201ENST00000264187 MYL6BP14649 208 aa17.79■□□□□ 0.44
NID1-201ENST00000264187 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 BCAR3O75815 825 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 CAMK4Q16566 473 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 NACAP1Q9BZK3 213 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 INCENPQ9NQS7 918 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
NID1-201ENST00000264187 CBFA2T2O43439 604 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 ZSCAN29Q8IWY8 852 aaPredicted RBP17.78■□□□□ 0.44
NID1-201ENST00000264187 USP5P45974 858 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
NID1-201ENST00000264187 PRDM10Q9NQV6 1147 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 ERC1Q8IUD2 1116 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 TAF4BQ92750 862 aa17.78■□□□□ 0.44
NID1-201ENST00000264187 MPHOSPH10O00566 681 aaKnown RBP17.77■□□□□ 0.44
NID1-201ENST00000264187 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.77■□□□□ 0.44
NID1-201ENST00000264187 K7ELQ4 463 aaPredicted RBP17.77■□□□□ 0.44
NID1-201ENST00000264187 DNA2P51530 1060 aa17.77■□□□□ 0.44
NID1-201ENST00000264187 EPB41L2O43491 1005 aaKnown RBP17.77■□□□□ 0.43
NID1-201ENST00000264187 DDX11Q96FC9 970 aa17.77■□□□□ 0.43
NID1-201ENST00000264187 CHMP4BP1P59074 171 aa17.77■□□□□ 0.43
NID1-201ENST00000264187 NOL7Q9UMY1 257 aaKnown RBP17.77■□□□□ 0.43
NID1-201ENST00000264187 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.43
NID1-201ENST00000264187 ZNF76P36508 570 aa17.76■□□□□ 0.43
NID1-201ENST00000264187 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
NID1-201ENST00000264187 ARHGAP29Q52LW3 1261 aa17.76■□□□□ 0.43
NID1-201ENST00000264187 CWC27Q6UX04 472 aaKnown RBP17.76■□□□□ 0.43
NID1-201ENST00000264187 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
NID1-201ENST00000264187 HDGFL1Q5TGJ6 251 aa17.76■□□□□ 0.43
NID1-201ENST00000264187 JAKMIP1Q96N16 626 aaKnown RBP17.76■□□□□ 0.43
NID1-201ENST00000264187 TXLNBQ8N3L3 684 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 NUP62CLQ9H1M0 184 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
NID1-201ENST00000264187 MAP2K1Q02750 393 aaPredicted RBP17.75■□□□□ 0.43
NID1-201ENST00000264187 CFAP100Q494V2 611 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 DHX8Q14562 1220 aaKnown RBP17.75■□□□□ 0.43
NID1-201ENST00000264187 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 TICAM2Q86XR7 235 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
NID1-201ENST00000264187 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 PDRG1Q9NUG6 133 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 TMX1Q9H3N1 280 aa17.75■□□□□ 0.43
NID1-201ENST00000264187 TDO2P48775 406 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 IQCEQ6IPM2 695 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 GCC1Q96CN9 775 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 PPM1FP49593 454 aaPredicted RBP17.74■□□□□ 0.43
NID1-201ENST00000264187 AACSQ86V21 672 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 AAMPQ13685 434 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 ESCO1Q5FWF5 840 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 GAS2L2Q8NHY3 880 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 UBXN4Q92575 508 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 NF2P35240 595 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 BLOC1S2Q6QNY1 142 aa17.74■□□□□ 0.43
NID1-201ENST00000264187 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
NID1-201ENST00000264187 CFAP45Q9UL16 551 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 IL1RAPL2Q9NP60 686 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 JAKMIP3Q5VZ66 844 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 GIMAP7Q8NHV1 300 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 UBAC1Q9BSL1 405 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 USP8P40818 1118 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 TMCO3Q6UWJ1 677 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
NID1-201ENST00000264187 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
NID1-201ENST00000264187 CBX1P83916 185 aa17.72■□□□□ 0.43
NID1-201ENST00000264187 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
NID1-201ENST00000264187 CRACR2AQ9BSW2 395 aa17.72■□□□□ 0.43
NID1-201ENST00000264187 CCDC7Q96M83 1385 aa17.72■□□□□ 0.43
NID1-201ENST00000264187 RAI14Q9P0K7 980 aa17.72■□□□□ 0.43
NID1-201ENST00000264187 SYCE3A1L190 88 aa17.71■□□□□ 0.43
NID1-201ENST00000264187 KLHL10Q6JEL2 608 aa17.71■□□□□ 0.43
NID1-201ENST00000264187 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
NID1-201ENST00000264187 UBE4AQ14139 1066 aa17.71■□□□□ 0.43
NID1-201ENST00000264187 BCCIPQ9P287 314 aaKnown RBP eCLIP17.7■□□□□ 0.42
NID1-201ENST00000264187 DCAF8L1A6NGE4 600 aa17.7■□□□□ 0.42
NID1-201ENST00000264187 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
NID1-201ENST00000264187 ANAPC15P60006 121 aa17.7■□□□□ 0.42
NID1-201ENST00000264187 DESP17661 470 aa17.7■□□□□ 0.42
NID1-201ENST00000264187 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
NID1-201ENST00000264187 CABP4P57796 275 aa17.7■□□□□ 0.42
NID1-201ENST00000264187 BICDL1Q6ZP65 573 aa17.7■□□□□ 0.42
NID1-201ENST00000264187 MIA2Q96PC5 1412 aa17.7■□□□□ 0.42
NID1-201ENST00000264187 WASHC2AQ641Q2 1341 aa17.69■□□□□ 0.42
NID1-201ENST00000264187 MACROD2A1Z1Q3 448 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms