RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CBX1P83916 185 aa14.69□□□□□ -0.06
ARFGEF1-201ENST00000262215 CCDC85AQ96PX6 553 aaPredicted RBP14.69□□□□□ -0.06
ARFGEF1-201ENST00000262215 ZNF76P36508 570 aa14.69□□□□□ -0.06
ARFGEF1-201ENST00000262215 CEP63Q96MT8 703 aa14.69□□□□□ -0.06
ARFGEF1-201ENST00000262215 FMN1Q68DA7 1419 aa14.69□□□□□ -0.06
ARFGEF1-201ENST00000262215 PDZRN3Q9UPQ7 1066 aa14.69□□□□□ -0.06
ARFGEF1-201ENST00000262215 ANAPC15P60006 121 aa14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 MACROD2A1Z1Q3 448 aa14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 DCAF8L1A6NGE4 600 aa14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 PIP4K2AP48426 406 aaPredicted RBP14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 CCDC158Q5M9N0 1113 aa14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 TRMT1LQ7Z2T5 733 aaKnown RBP14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 RABEP1Q15276 862 aa14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 LARP1BQ659C4 914 aaKnown RBP14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 GPATCH11Q8N954 259 aa14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 MYL6BP14649 208 aa14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 SRRTQ9BXP5 876 aaKnown RBP14.68□□□□□ -0.06
ARFGEF1-201ENST00000262215 TMCO3Q6UWJ1 677 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 TRIM22Q8IYM9 498 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 CTNNBL1Q8WYA6 563 aaPredicted RBP14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 TAF4BQ92750 862 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 CDCA7LQ96GN5 454 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 PDCP20941 246 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 DDX11Q96FC9 970 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 CYP46A1Q9Y6A2 500 aa14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
ARFGEF1-201ENST00000262215 RNF187Q5TA31 235 aaPredicted RBP14.66□□□□□ -0.06
ARFGEF1-201ENST00000262215 POLR3GO15318 223 aaPredicted RBP14.66□□□□□ -0.06
ARFGEF1-201ENST00000262215 EPB41L2O43491 1005 aaKnown RBP14.66□□□□□ -0.06
ARFGEF1-201ENST00000262215 JMYQ8N9B5 988 aa14.66□□□□□ -0.06
ARFGEF1-201ENST00000262215 USP47Q96K76 1375 aa14.66□□□□□ -0.06
ARFGEF1-201ENST00000262215 ATF3P18847 181 aa14.66□□□□□ -0.06
ARFGEF1-201ENST00000262215 NLRP6P59044 892 aa14.66□□□□□ -0.06
ARFGEF1-201ENST00000262215 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 UBE2Q2Q8WVN8 375 aa14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 SPATA32Q96LK8 384 aa14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 DACH1Q9UI36 760 aa14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 ARHGAP29Q52LW3 1261 aa14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 CCDC178Q5BJE1 867 aa14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 UBA5Q9GZZ9 404 aa14.65□□□□□ -0.06
ARFGEF1-201ENST00000262215 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 CCDC91Q7Z6B0 441 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 GRPEL1Q9HAV7 217 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 CFAP100Q494V2 611 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 UPF3BQ9BZI7 483 aaKnown RBP14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 GSTTP1A0A1W2PQM5 241 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 LIG1P18858 919 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 ZMYND15Q9H091 742 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 JAKMIP3Q5VZ66 844 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 TSR2Q969E8 191 aaKnown RBP14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 SCLT1Q96NL6 688 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 RAI14Q9P0K7 980 aa14.64□□□□□ -0.07
ARFGEF1-201ENST00000262215 NOB1Q9ULX3 412 aaKnown RBP14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 CCDC30Q5VVM6 783 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 ZBTB9Q96C00 473 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 CWC27Q6UX04 472 aaKnown RBP14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 CRACR2AQ9BSW2 395 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 NUTM2BA6NNL0 878 aaPredicted RBP14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 NUTM2EB1AL46 878 aaPredicted RBP14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 EXOSC9Q06265 439 aaKnown RBP14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 NUTM2AQ8IVF1 878 aaPredicted RBP14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 COMMD10Q9Y6G5 202 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 KIF7Q2M1P5 1343 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 KRT85P78386 507 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 CARMIL2Q6F5E8 1435 aa14.63□□□□□ -0.07
ARFGEF1-201ENST00000262215 ERC1Q8IUD2 1116 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 BMP2KQ9NSY1 1161 aaPredicted RBP14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 TDO2P48775 406 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 USP8P40818 1118 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 CEP57L1Q8IYX8 460 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 UBXN4Q92575 508 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.62□□□□□ -0.073e-6■■■■□ 21.7
ARFGEF1-201ENST00000262215 CBFA2T2O43439 604 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 GNL3LQ9NVN8 582 aaKnown RBP14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 ESPNB1AK53 854 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 SMC1AQ14683 1233 aaKnown RBP14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 RSPH4AQ5TD94 716 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 PDCL2Q8N4E4 241 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 IFFO1Q0D2I5 559 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 ADAMTS8Q9UP79 889 aa14.62□□□□□ -0.07
ARFGEF1-201ENST00000262215 CPLX3Q8WVH0 158 aa14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 DESP17661 470 aa14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 FERMT3Q86UX7 667 aa14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 JAKMIP1Q96N16 626 aaKnown RBP14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 NOL7Q9UMY1 257 aaKnown RBP14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 GNAI3P08754 354 aa14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 NACAP1Q9BZK3 213 aa14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 BCAR3O75815 825 aa14.61□□□□□ -0.07
ARFGEF1-201ENST00000262215 IQCEQ6IPM2 695 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 CCDC148Q8NFR7 591 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 GNAI2P04899 355 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 CCDC82Q8N4S0 544 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 ZNF526Q8TF50 670 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms