RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 COL5A2P05997 1499 aaPredicted RBP25.76■■□□□ 1.71
UPK3B-201ENST00000257632 LTN1O94822 1766 aa25.76■■□□□ 1.71
UPK3B-201ENST00000257632 COL18A1P39060 1754 aa25.76■■□□□ 1.71
UPK3B-201ENST00000257632 PANK3Q9H999 370 aa25.75■■□□□ 1.71
UPK3B-201ENST00000257632 CGNL1Q0VF96 1302 aa25.73■■□□□ 1.71
UPK3B-201ENST00000257632 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
UPK3B-201ENST00000257632 LARP1Q6PKG0 1096 aaKnown RBP25.73■■□□□ 1.71
UPK3B-201ENST00000257632 USP35Q9P2H5 1018 aa25.73■■□□□ 1.71
UPK3B-201ENST00000257632 RGPD5Q99666 1765 aa25.73■■□□□ 1.71
UPK3B-201ENST00000257632 SPATA31A1Q5TZJ5 1347 aa25.72■■□□□ 1.71
UPK3B-201ENST00000257632 AXIN2Q9Y2T1 843 aa25.72■■□□□ 1.71
UPK3B-201ENST00000257632 ABCC6O95255 1503 aa25.72■■□□□ 1.71
UPK3B-201ENST00000257632 SEPT12Q8IYM1 358 aa25.71■■□□□ 1.71
UPK3B-201ENST00000257632 CSB-PGBD3P0DP91 1061 aa25.7■■□□□ 1.7
UPK3B-201ENST00000257632 TOM1L2Q6ZVM7 507 aa25.69■■□□□ 1.7
UPK3B-201ENST00000257632 CRB1P82279 1406 aa25.69■■□□□ 1.7
UPK3B-201ENST00000257632 ONECUT3O60422 494 aaPredicted RBP25.68■■□□□ 1.7
UPK3B-201ENST00000257632 CCDC7Q96M83 1385 aa25.68■■□□□ 1.7
UPK3B-201ENST00000257632 WDR17Q8IZU2 1322 aa25.67■■□□□ 1.7
UPK3B-201ENST00000257632 BRWD3Q6RI45 1802 aa25.67■■□□□ 1.7
UPK3B-201ENST00000257632 FBLN1P23142 703 aa25.66■■□□□ 1.7
UPK3B-201ENST00000257632 AMPHP49418 695 aa25.66■■□□□ 1.7
UPK3B-201ENST00000257632 TCP11L2Q8N4U5 519 aa25.66■■□□□ 1.7
UPK3B-201ENST00000257632 MAP3K19Q56UN5 1328 aa25.65■■□□□ 1.7
UPK3B-201ENST00000257632 WASHC2AQ641Q2 1341 aa25.64■■□□□ 1.7
UPK3B-201ENST00000257632 THRAP3Q9Y2W1 955 aaKnown RBP25.64■■□□□ 1.7
UPK3B-201ENST00000257632 KNSTRNQ9Y448 316 aa25.64■■□□□ 1.7
UPK3B-201ENST00000257632 RRS1Q15050 365 aaKnown RBP25.63■■□□□ 1.69
UPK3B-201ENST00000257632 BARGINQ6ZT62 677 aa25.63■■□□□ 1.69
UPK3B-201ENST00000257632 IP6K1Q92551 441 aa25.63■■□□□ 1.69
UPK3B-201ENST00000257632 ANKRD26Q9UPS8 1709 aa25.63■■□□□ 1.69
UPK3B-201ENST00000257632 BLMP54132 1417 aaPredicted RBP25.63■■□□□ 1.69
UPK3B-201ENST00000257632 THSD7AQ9UPZ6 1657 aa25.62■■□□□ 1.69
UPK3B-201ENST00000257632 EP400Q96L91 3159 aa25.62■■□□□ 1.69
UPK3B-201ENST00000257632 ZEB1P37275 1124 aaPredicted RBP25.62■■□□□ 1.69
UPK3B-201ENST00000257632 KRT27Q7Z3Y8 459 aa25.61■■□□□ 1.69
UPK3B-201ENST00000257632 ANKRD24Q8TF21 1146 aa25.61■■□□□ 1.69
UPK3B-201ENST00000257632 ERBB3P21860 1342 aa25.61■■□□□ 1.69
UPK3B-201ENST00000257632 RTL1A6NKG5 1358 aa25.59■■□□□ 1.69
UPK3B-201ENST00000257632 NSD2O96028 1365 aa25.59■■□□□ 1.69
UPK3B-201ENST00000257632 HOXC9P31274 260 aa25.59■■□□□ 1.69
UPK3B-201ENST00000257632 LTV1Q96GA3 475 aaPredicted RBP25.59■■□□□ 1.69
UPK3B-201ENST00000257632 CARD10Q9BWT7 1032 aa25.59■■□□□ 1.69
UPK3B-201ENST00000257632 NLRP2Q9NX02 1062 aa25.58■■□□□ 1.69
UPK3B-201ENST00000257632 TNNT2P45379 298 aaPredicted RBP25.56■■□□□ 1.68
UPK3B-201ENST00000257632 MAP2P11137 1827 aaKnown RBP25.54■■□□□ 1.68
UPK3B-201ENST00000257632 WNK3Q9BYP7 1800 aa25.54■■□□□ 1.68
UPK3B-201ENST00000257632 PPM1GO15355 546 aaPredicted RBP25.54■■□□□ 1.68
UPK3B-201ENST00000257632 MORC1Q86VD1 984 aa25.54■■□□□ 1.68
UPK3B-201ENST00000257632 CCDC125Q86Z20 511 aa25.54■■□□□ 1.68
UPK3B-201ENST00000257632 FAM208AQ9UK61 1670 aaKnown RBP25.54■■□□□ 1.68
UPK3B-201ENST00000257632 FLT4P35916 1363 aa25.54■■□□□ 1.68
UPK3B-201ENST00000257632 KIF24Q5T7B8 1368 aa25.54■■□□□ 1.68
UPK3B-201ENST00000257632 PDE3BQ13370 1112 aa25.53■■□□□ 1.68
UPK3B-201ENST00000257632 EMILIN1Q9Y6C2 1016 aa25.53■■□□□ 1.68
UPK3B-201ENST00000257632 PARP4Q9UKK3 1724 aaKnown RBP25.52■■□□□ 1.68
UPK3B-201ENST00000257632 CDCA7Q9BWT1 371 aaPredicted RBP25.52■■□□□ 1.68
UPK3B-201ENST00000257632 SMG6Q86US8 1419 aaKnown RBP25.52■■□□□ 1.68
UPK3B-201ENST00000257632 PEAK1Q9H792 1746 aa25.51■■□□□ 1.68
UPK3B-201ENST00000257632 AMER1Q5JTC6 1135 aaPredicted RBP25.5■■□□□ 1.67
UPK3B-201ENST00000257632 INSRP06213 1382 aa25.49■■□□□ 1.67
UPK3B-201ENST00000257632 PER1O15534 1290 aaPredicted RBP25.49■■□□□ 1.67
UPK3B-201ENST00000257632 HSP90AB2PQ58FF8 381 aa25.49■■□□□ 1.67
UPK3B-201ENST00000257632 DDB1Q16531 1140 aa25.48■■□□□ 1.67
UPK3B-201ENST00000257632 FAM182BQ5T319 152 aa25.48■■□□□ 1.67
UPK3B-201ENST00000257632 LRRC37A3O60309 1634 aa25.48■■□□□ 1.67
UPK3B-201ENST00000257632 POLKQ9UBT6 870 aa25.47■■□□□ 1.67
UPK3B-201ENST00000257632 RGPD2P0DJD1 1756 aa25.46■■□□□ 1.67
UPK3B-201ENST00000257632 CC2D1BQ5T0F9 858 aaKnown RBP25.46■■□□□ 1.67
UPK3B-201ENST00000257632 DISP2A7MBM2 1401 aa25.46■■□□□ 1.67
UPK3B-201ENST00000257632 IL2RBP14784 551 aa25.45■■□□□ 1.66
UPK3B-201ENST00000257632 CNGB1Q14028 1251 aaPredicted RBP25.45■■□□□ 1.66
UPK3B-201ENST00000257632 SRCAPQ6ZRS2 3230 aa25.44■■□□□ 1.66
UPK3B-201ENST00000257632 EXOC5O00471 708 aa25.43■■□□□ 1.66
UPK3B-201ENST00000257632 SF3B2Q13435 895 aaKnown RBP25.43■■□□□ 1.66
UPK3B-201ENST00000257632 FAM196AQ6ZSG2 479 aa25.43■■□□□ 1.66
UPK3B-201ENST00000257632 DEFB132Q7Z7B7 95 aa25.43■■□□□ 1.66
UPK3B-201ENST00000257632 NBPF6Q5VWK0 638 aa25.4■■□□□ 1.66
UPK3B-201ENST00000257632 NBPF4Q96M43 638 aa25.4■■□□□ 1.66
UPK3B-201ENST00000257632 NPC1L1Q9UHC9 1359 aa25.4■■□□□ 1.66
UPK3B-201ENST00000257632 TNS2Q63HR2 1409 aa25.39■■□□□ 1.66
UPK3B-201ENST00000257632 USHBP1Q8N6Y0 703 aa25.39■■□□□ 1.66
UPK3B-201ENST00000257632 OVOS2A0A0G2JMS6 1433 aa25.38■■□□□ 1.65
UPK3B-201ENST00000257632 RGPD1P0DJD0 1748 aa25.37■■□□□ 1.65
UPK3B-201ENST00000257632 RAPGEF4Q8WZA2 1011 aa25.35■■□□□ 1.65
UPK3B-201ENST00000257632 TRIM37O94972 964 aa25.34■■□□□ 1.65
UPK3B-201ENST00000257632 MARCH10Q8NA82 808 aaPredicted RBP25.34■■□□□ 1.65
UPK3B-201ENST00000257632 EIF4A2Q14240 407 aaKnown RBP25.33■■□□□ 1.65
UPK3B-201ENST00000257632 TATP17735 454 aaPredicted RBP25.32■■□□□ 1.64
UPK3B-201ENST00000257632 MEGF6O75095 1541 aa25.32■■□□□ 1.64
UPK3B-201ENST00000257632 BAG6P46379 1132 aa25.31■■□□□ 1.64
UPK3B-201ENST00000257632 EYA1Q99502 592 aa25.31■■□□□ 1.64
UPK3B-201ENST00000257632 MTHFSP49914 203 aa25.3■■□□□ 1.64
UPK3B-201ENST00000257632 DDX54Q8TDD1 881 aaKnown RBP25.29■■□□□ 1.64
UPK3B-201ENST00000257632 TNS1Q9HBL0 1735 aaKnown RBP25.29■■□□□ 1.64
UPK3B-201ENST00000257632 ZCRB1Q8TBF4 217 aaKnown RBP25.28■■□□□ 1.64
UPK3B-201ENST00000257632 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
UPK3B-201ENST00000257632 SBF2Q86WG5 1849 aa25.27■■□□□ 1.64
UPK3B-201ENST00000257632 NCAPD2Q15021 1401 aa25.26■■□□□ 1.63
UPK3B-201ENST00000257632 APBA3O96018 575 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms