RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 ZBTB7CA1YPR0 619 aa29.77■■■□□ 2.36
NXT1-201ENST00000254998 ONECUT3O60422 494 aaPredicted RBP29.76■■■□□ 2.35
NXT1-201ENST00000254998 EVA1CP58658 441 aa29.76■■■□□ 2.35
NXT1-201ENST00000254998 STRN4Q9NRL3 753 aa29.76■■■□□ 2.35
NXT1-201ENST00000254998 AXIN2Q9Y2T1 843 aa29.75■■■□□ 2.35
NXT1-201ENST00000254998 SPATA31A1Q5TZJ5 1347 aa29.74■■■□□ 2.35
NXT1-201ENST00000254998 LTN1O94822 1766 aa29.74■■■□□ 2.35
NXT1-201ENST00000254998 WASHC2AQ641Q2 1341 aa29.73■■■□□ 2.35
NXT1-201ENST00000254998 ZEB1P37275 1124 aaPredicted RBP29.73■■■□□ 2.35
NXT1-201ENST00000254998 LARP1Q6PKG0 1096 aaKnown RBP29.72■■■□□ 2.35
NXT1-201ENST00000254998 RGPD5Q99666 1765 aa29.69■■■□□ 2.34
NXT1-201ENST00000254998 CRB1P82279 1406 aa29.69■■■□□ 2.34
NXT1-201ENST00000254998 WDR17Q8IZU2 1322 aa29.69■■■□□ 2.34
NXT1-201ENST00000254998 MAP3K19Q56UN5 1328 aa29.68■■■□□ 2.34
NXT1-201ENST00000254998 NSD2O96028 1365 aa29.67■■■□□ 2.34
NXT1-201ENST00000254998 SEPT12Q8IYM1 358 aa29.67■■■□□ 2.34
NXT1-201ENST00000254998 IP6K1Q92551 441 aa29.67■■■□□ 2.34
NXT1-201ENST00000254998 BLMP54132 1417 aaPredicted RBP29.67■■■□□ 2.34
NXT1-201ENST00000254998 ANKRD26Q9UPS8 1709 aa29.66■■■□□ 2.34
NXT1-201ENST00000254998 FAM98CQ17RN3 349 aaKnown RBP29.66■■■□□ 2.34
NXT1-201ENST00000254998 RTL1A6NKG5 1358 aa29.65■■■□□ 2.34
NXT1-201ENST00000254998 BARGINQ6ZT62 677 aa29.65■■■□□ 2.34
NXT1-201ENST00000254998 THRAP3Q9Y2W1 955 aaKnown RBP29.65■■■□□ 2.34
NXT1-201ENST00000254998 KNSTRNQ9Y448 316 aa29.65■■■□□ 2.34
NXT1-201ENST00000254998 THSD7AQ9UPZ6 1657 aa29.65■■■□□ 2.34
NXT1-201ENST00000254998 FBLN1P23142 703 aa29.64■■■□□ 2.34
NXT1-201ENST00000254998 TCP11L2Q8N4U5 519 aa29.64■■■□□ 2.34
NXT1-201ENST00000254998 ERBB3P21860 1342 aa29.63■■■□□ 2.33
NXT1-201ENST00000254998 KIF24Q5T7B8 1368 aa29.62■■■□□ 2.33
NXT1-201ENST00000254998 TOM1L2Q6ZVM7 507 aa29.61■■■□□ 2.33
NXT1-201ENST00000254998 BRWD3Q6RI45 1802 aa29.6■■■□□ 2.33
NXT1-201ENST00000254998 PER1O15534 1290 aaPredicted RBP29.6■■■□□ 2.33
NXT1-201ENST00000254998 HOXC9P31274 260 aa29.6■■■□□ 2.33
NXT1-201ENST00000254998 AMPHP49418 695 aa29.6■■■□□ 2.33
NXT1-201ENST00000254998 RRS1Q15050 365 aaKnown RBP29.6■■■□□ 2.33
NXT1-201ENST00000254998 CARD10Q9BWT7 1032 aa29.6■■■□□ 2.33
NXT1-201ENST00000254998 USP35Q9P2H5 1018 aa29.6■■■□□ 2.33
NXT1-201ENST00000254998 CSB-PGBD3P0DP91 1061 aa29.59■■■□□ 2.33
NXT1-201ENST00000254998 AMER1Q5JTC6 1135 aaPredicted RBP29.59■■■□□ 2.33
NXT1-201ENST00000254998 ANKRD24Q8TF21 1146 aa29.58■■■□□ 2.33
NXT1-201ENST00000254998 A0A0G2JS52 829 aa29.56■■■□□ 2.32
NXT1-201ENST00000254998 MYT1Q01538 1121 aa29.56■■■□□ 2.32
NXT1-201ENST00000254998 FLT4P35916 1363 aa29.55■■■□□ 2.32
NXT1-201ENST00000254998 PEAK1Q9H792 1746 aa29.54■■■□□ 2.32
NXT1-201ENST00000254998 KRT27Q7Z3Y8 459 aa29.54■■■□□ 2.32
NXT1-201ENST00000254998 FAM208AQ9UK61 1670 aaKnown RBP29.53■■■□□ 2.32
NXT1-201ENST00000254998 NPC1L1Q9UHC9 1359 aa29.53■■■□□ 2.32
NXT1-201ENST00000254998 INSRP06213 1382 aa29.52■■■□□ 2.32
NXT1-201ENST00000254998 EMILIN1Q9Y6C2 1016 aa29.52■■■□□ 2.32
NXT1-201ENST00000254998 PARP4Q9UKK3 1724 aaKnown RBP29.51■■■□□ 2.32
NXT1-201ENST00000254998 MAP2P11137 1827 aaKnown RBP29.51■■■□□ 2.31
NXT1-201ENST00000254998 MORC1Q86VD1 984 aa29.51■■■□□ 2.31
NXT1-201ENST00000254998 UPF1Q92900 1129 aaKnown RBP eCLIP29.51■■■□□ 2.31
NXT1-201ENST00000254998 CDCA7Q9BWT1 371 aaPredicted RBP29.51■■■□□ 2.31
NXT1-201ENST00000254998 NLRP2Q9NX02 1062 aa29.51■■■□□ 2.31
NXT1-201ENST00000254998 WNK3Q9BYP7 1800 aa29.5■■■□□ 2.31
NXT1-201ENST00000254998 POLKQ9UBT6 870 aa29.5■■■□□ 2.31
NXT1-201ENST00000254998 DISP2A7MBM2 1401 aa29.5■■■□□ 2.31
NXT1-201ENST00000254998 HSP90AB2PQ58FF8 381 aa29.47■■■□□ 2.31
NXT1-201ENST00000254998 LTV1Q96GA3 475 aaPredicted RBP29.47■■■□□ 2.31
NXT1-201ENST00000254998 SMG6Q86US8 1419 aaKnown RBP29.46■■■□□ 2.31
NXT1-201ENST00000254998 TNNT2P45379 298 aaPredicted RBP29.46■■■□□ 2.31
NXT1-201ENST00000254998 LRRC37A3O60309 1634 aa29.43■■■□□ 2.3
NXT1-201ENST00000254998 EP400Q96L91 3159 aa29.42■■■□□ 2.3
NXT1-201ENST00000254998 PPM1GO15355 546 aaPredicted RBP29.42■■■□□ 2.3
NXT1-201ENST00000254998 PDE3BQ13370 1112 aa29.42■■■□□ 2.3
NXT1-201ENST00000254998 DDB1Q16531 1140 aa29.4■■■□□ 2.3
NXT1-201ENST00000254998 IL2RBP14784 551 aa29.39■■■□□ 2.3
NXT1-201ENST00000254998 CC2D1BQ5T0F9 858 aaKnown RBP29.39■■■□□ 2.3
NXT1-201ENST00000254998 CCDC125Q86Z20 511 aa29.39■■■□□ 2.3
NXT1-201ENST00000254998 RGPD2P0DJD1 1756 aa29.39■■■□□ 2.29
NXT1-201ENST00000254998 NBPF6Q5VWK0 638 aa29.38■■■□□ 2.29
NXT1-201ENST00000254998 NBPF4Q96M43 638 aa29.38■■■□□ 2.29
NXT1-201ENST00000254998 FAM196AQ6ZSG2 479 aa29.36■■■□□ 2.29
NXT1-201ENST00000254998 TNS2Q63HR2 1409 aa29.36■■■□□ 2.29
NXT1-201ENST00000254998 NCAPD2Q15021 1401 aa29.35■■■□□ 2.29
NXT1-201ENST00000254998 EXOC5O00471 708 aa29.34■■■□□ 2.29
NXT1-201ENST00000254998 FAM182BQ5T319 152 aa29.34■■■□□ 2.29
NXT1-201ENST00000254998 OVOS2A0A0G2JMS6 1433 aa29.31■■■□□ 2.28
NXT1-201ENST00000254998 EIF4A2Q14240 407 aaKnown RBP29.31■■■□□ 2.28
NXT1-201ENST00000254998 BCL9O00512 1426 aa29.3■■■□□ 2.28
NXT1-201ENST00000254998 MARCH10Q8NA82 808 aaPredicted RBP29.29■■■□□ 2.28
NXT1-201ENST00000254998 USHBP1Q8N6Y0 703 aa29.28■■■□□ 2.28
NXT1-201ENST00000254998 EYA1Q99502 592 aa29.28■■■□□ 2.28
NXT1-201ENST00000254998 MEGF6O75095 1541 aa29.28■■■□□ 2.28
NXT1-201ENST00000254998 MTHFSP49914 203 aa29.27■■■□□ 2.28
NXT1-201ENST00000254998 RAPGEF4Q8WZA2 1011 aa29.26■■■□□ 2.27
NXT1-201ENST00000254998 RGPD1P0DJD0 1748 aa29.25■■■□□ 2.27
NXT1-201ENST00000254998 IGSF1Q8N6C5 1336 aa29.23■■■□□ 2.27
NXT1-201ENST00000254998 DDX10Q13206 875 aaKnown RBP29.23■■■□□ 2.27
NXT1-201ENST00000254998 SF3B2Q13435 895 aaKnown RBP29.23■■■□□ 2.27
NXT1-201ENST00000254998 TATP17735 454 aaPredicted RBP29.22■■■□□ 2.27
NXT1-201ENST00000254998 CNGB1Q14028 1251 aaPredicted RBP29.22■■■□□ 2.27
NXT1-201ENST00000254998 TNS1Q9HBL0 1735 aaKnown RBP29.21■■■□□ 2.27
NXT1-201ENST00000254998 ZCRB1Q8TBF4 217 aaKnown RBP29.21■■■□□ 2.27
NXT1-201ENST00000254998 TRIM37O94972 964 aa29.2■■■□□ 2.26
NXT1-201ENST00000254998 IL13P35225 146 aa29.2■■■□□ 2.26
NXT1-201ENST00000254998 PLEKHG2Q9H7P9 1386 aa29.2■■■□□ 2.26
NXT1-201ENST00000254998 SBF2Q86WG5 1849 aa29.19■■■□□ 2.26
NXT1-201ENST00000254998 SHANK3Q9BYB0 1731 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms