RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 U2AF1L5P0DN76 240 aaPredicted RBP25.54■■□□□ 1.68
SBDS-201ENST00000246868 U2AF1Q01081 240 aaKnown RBP eCLIP25.54■■□□□ 1.68
SBDS-201ENST00000246868 IL13P35225 146 aa25.52■■□□□ 1.68
SBDS-201ENST00000246868 ABCA3Q99758 1704 aa25.52■■□□□ 1.68
SBDS-201ENST00000246868 COL22A1Q8NFW1 1626 aaPredicted RBP25.52■■□□□ 1.68
SBDS-201ENST00000246868 CPDO75976 1380 aa25.52■■□□□ 1.68
SBDS-201ENST00000246868 EIF4A2Q14240 407 aaKnown RBP25.51■■□□□ 1.67
SBDS-201ENST00000246868 HNRNPUQ00839 825 aaKnown RBP eCLIP25.5■■□□□ 1.67
SBDS-201ENST00000246868 BLMP54132 1417 aaPredicted RBP25.49■■□□□ 1.67
SBDS-201ENST00000246868 KIAA0232Q92628 1395 aa25.49■■□□□ 1.67
SBDS-201ENST00000246868 ABCC6O95255 1503 aa25.49■■□□□ 1.67
SBDS-201ENST00000246868 PNNQ9H307 717 aaKnown RBP25.48■■□□□ 1.67
SBDS-201ENST00000246868 PRDM11Q9NQV5 511 aa25.48■■□□□ 1.67
SBDS-201ENST00000246868 LTV1Q96GA3 475 aaPredicted RBP25.45■■□□□ 1.67
SBDS-201ENST00000246868 FCHSD2O94868 740 aa25.44■■□□□ 1.66
SBDS-201ENST00000246868 JCADQ9P266 1359 aa25.44■■□□□ 1.66
SBDS-201ENST00000246868 CHRNA2Q15822 529 aa25.43■■□□□ 1.66
SBDS-201ENST00000246868 CCDC146Q8IYE0 955 aa25.43■■□□□ 1.66
SBDS-201ENST00000246868 RUNDC1Q96C34 613 aa25.42■■□□□ 1.66
SBDS-201ENST00000246868 NEFMP07197 916 aa25.41■■□□□ 1.66
SBDS-201ENST00000246868 COL18A1P39060 1754 aa25.41■■□□□ 1.66
SBDS-201ENST00000246868 ANKRD24Q8TF21 1146 aa25.41■■□□□ 1.66
SBDS-201ENST00000246868 AXIN2Q9Y2T1 843 aa25.41■■□□□ 1.66
SBDS-201ENST00000246868 RGPD1P0DJD0 1748 aa25.4■■□□□ 1.66
SBDS-201ENST00000246868 HMOX1P09601 288 aa25.4■■□□□ 1.66
SBDS-201ENST00000246868 RGPD5Q99666 1765 aa25.4■■□□□ 1.66
SBDS-201ENST00000246868 MAPK8IP3Q9UPT6 1336 aa25.39■■□□□ 1.66
SBDS-201ENST00000246868 HSPA1LP34931 641 aa25.39■■□□□ 1.66
SBDS-201ENST00000246868 EYA1Q99502 592 aa25.39■■□□□ 1.66
SBDS-201ENST00000246868 IGSF1Q8N6C5 1336 aa25.38■■□□□ 1.65
SBDS-201ENST00000246868 SULT6B1Q6IMI4 303 aa25.38■■□□□ 1.65
SBDS-201ENST00000246868 RSPH6AQ9H0K4 717 aa25.38■■□□□ 1.65
SBDS-201ENST00000246868 ERBB3P21860 1342 aa25.38■■□□□ 1.65
SBDS-201ENST00000246868 PRKAR2BP31323 418 aa25.37■■□□□ 1.65
SBDS-201ENST00000246868 NUTM2BA6NNL0 878 aaPredicted RBP25.36■■□□□ 1.65
SBDS-201ENST00000246868 NUTM2EB1AL46 878 aaPredicted RBP25.36■■□□□ 1.65
SBDS-201ENST00000246868 NUTM2AQ8IVF1 878 aaPredicted RBP25.36■■□□□ 1.65
SBDS-201ENST00000246868 ZBED9Q6R2W3 1325 aa25.35■■□□□ 1.65
SBDS-201ENST00000246868 FAM83GA6ND36 823 aa25.35■■□□□ 1.65
SBDS-201ENST00000246868 CSB-PGBD3P0DP91 1061 aa25.35■■□□□ 1.65
SBDS-201ENST00000246868 LMO7Q8WWI1 1683 aa25.35■■□□□ 1.65
SBDS-201ENST00000246868 COL14A1Q05707 1796 aaKnown RBP25.35■■□□□ 1.65
SBDS-201ENST00000246868 APAF1O14727 1248 aa25.34■■□□□ 1.65
SBDS-201ENST00000246868 PLEKHF1Q96S99 279 aa25.34■■□□□ 1.65
SBDS-201ENST00000246868 NGEFQ8N5V2 710 aa25.34■■□□□ 1.65
SBDS-201ENST00000246868 FAM208AQ9UK61 1670 aaKnown RBP25.34■■□□□ 1.65
SBDS-201ENST00000246868 KDRP35968 1356 aa25.33■■□□□ 1.65
SBDS-201ENST00000246868 SPATA31A6Q5VVP1 1343 aa25.33■■□□□ 1.65
SBDS-201ENST00000246868 AEBP1Q8IUX7 1158 aa25.33■■□□□ 1.65
SBDS-201ENST00000246868 ADAMTS2O95450 1211 aa25.32■■□□□ 1.64
SBDS-201ENST00000246868 NBPF6Q5VWK0 638 aa25.32■■□□□ 1.64
SBDS-201ENST00000246868 TCP11L2Q8N4U5 519 aa25.32■■□□□ 1.64
SBDS-201ENST00000246868 NBPF4Q96M43 638 aa25.32■■□□□ 1.64
SBDS-201ENST00000246868 CAMTA1Q9Y6Y1 1673 aa25.32■■□□□ 1.64
SBDS-201ENST00000246868 SENP3-EIF4A1A0A087X0R7 540 aa25.31■■□□□ 1.64
SBDS-201ENST00000246868 CENPBP07199 599 aaPredicted RBP25.3■■□□□ 1.64
SBDS-201ENST00000246868 EVA1CP58658 441 aa25.3■■□□□ 1.64
SBDS-201ENST00000246868 NLRP2Q9NX02 1062 aa25.3■■□□□ 1.64
SBDS-201ENST00000246868 SALL2Q9Y467 1007 aaPredicted RBP25.3■■□□□ 1.64
SBDS-201ENST00000246868 RGPD2P0DJD1 1756 aa25.3■■□□□ 1.64
SBDS-201ENST00000246868 COL5A2P05997 1499 aaPredicted RBP25.29■■□□□ 1.64
SBDS-201ENST00000246868 WDR17Q8IZU2 1322 aa25.29■■□□□ 1.64
SBDS-201ENST00000246868 USHBP1Q8N6Y0 703 aa25.28■■□□□ 1.64
SBDS-201ENST00000246868 BTG4Q9NY30 223 aa25.28■■□□□ 1.64
SBDS-201ENST00000246868 NCAPD2Q15021 1401 aa25.26■■□□□ 1.63
SBDS-201ENST00000246868 NEUROD2Q15784 382 aa25.26■■□□□ 1.63
SBDS-201ENST00000246868 TOM1L2Q6ZVM7 507 aa25.26■■□□□ 1.63
SBDS-201ENST00000246868 STRN4Q9NRL3 753 aa25.26■■□□□ 1.63
SBDS-201ENST00000246868 NCBP3Q53F19 620 aaKnown RBP25.25■■□□□ 1.63
SBDS-201ENST00000246868 PHACTR3Q96KR7 559 aa25.25■■□□□ 1.63
SBDS-201ENST00000246868 TMPOP42166 694 aaKnown RBP25.24■■□□□ 1.63
SBDS-201ENST00000246868 RRP7AQ9Y3A4 280 aaKnown RBP25.24■■□□□ 1.63
SBDS-201ENST00000246868 PLCH1Q4KWH8 1693 aa25.23■■□□□ 1.63
SBDS-201ENST00000246868 NFE2L2Q16236 605 aa25.23■■□□□ 1.63
SBDS-201ENST00000246868 RIPK4P57078 832 aa25.21■■□□□ 1.63
SBDS-201ENST00000246868 CCDC27Q2M243 656 aa25.2■■□□□ 1.62
SBDS-201ENST00000246868 LARP1Q6PKG0 1096 aaKnown RBP25.2■■□□□ 1.62
SBDS-201ENST00000246868 RAPGEF4Q8WZA2 1011 aa25.2■■□□□ 1.62
SBDS-201ENST00000246868 CARD10Q9BWT7 1032 aa25.2■■□□□ 1.62
SBDS-201ENST00000246868 NWD2Q9ULI1 1742 aa25.2■■□□□ 1.62
SBDS-201ENST00000246868 GAS2L2Q8NHY3 880 aa25.19■■□□□ 1.62
SBDS-201ENST00000246868 CRB1P82279 1406 aa25.19■■□□□ 1.62
SBDS-201ENST00000246868 LMOD3Q0VAK6 560 aa25.19■■□□□ 1.62
SBDS-201ENST00000246868 PDE3BQ13370 1112 aa25.19■■□□□ 1.62
SBDS-201ENST00000246868 MEX3CQ5U5Q3 659 aaKnown RBP25.19■■□□□ 1.62
SBDS-201ENST00000246868 NGLY1Q96IV0 654 aa25.19■■□□□ 1.62
SBDS-201ENST00000246868 C8orf37Q96NL8 207 aa25.19■■□□□ 1.62
SBDS-201ENST00000246868 FBXO41Q8TF61 875 aa25.18■■□□□ 1.62
SBDS-201ENST00000246868 LRP6O75581 1613 aa25.17■■□□□ 1.62
SBDS-201ENST00000246868 WWC1Q8IX03 1113 aa25.17■■□□□ 1.62
SBDS-201ENST00000246868 SLIT2O94813 1529 aa25.16■■□□□ 1.62
SBDS-201ENST00000246868 TATP17735 454 aaPredicted RBP25.16■■□□□ 1.62
SBDS-201ENST00000246868 AMOTQ4VCS5 1084 aa25.16■■□□□ 1.62
SBDS-201ENST00000246868 PLEKHO1Q53GL0 409 aaPredicted RBP25.16■■□□□ 1.62
SBDS-201ENST00000246868 PLEKHG2Q9H7P9 1386 aa25.16■■□□□ 1.62
SBDS-201ENST00000246868 ZNF521Q96K83 1311 aa25.16■■□□□ 1.62
SBDS-201ENST00000246868 MTHFSDQ2M296 383 aaKnown RBP25.15■■□□□ 1.62
SBDS-201ENST00000246868 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
SBDS-201ENST00000246868 NRAPQ86VF7 1730 aa25.15■■□□□ 1.62
SBDS-201ENST00000246868 GOLGA2Q08379 1002 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms