RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 COL14A1Q05707 1796 aaKnown RBP27.19■■□□□ 1.94
SNRPA-201ENST00000243563 HOXC9P31274 260 aa27.19■■□□□ 1.94
SNRPA-201ENST00000243563 HSP90AB2PQ58FF8 381 aa27.19■■□□□ 1.94
SNRPA-201ENST00000243563 FLT4P35916 1363 aa27.18■■□□□ 1.94
SNRPA-201ENST00000243563 CAMTA1Q9Y6Y1 1673 aa27.18■■□□□ 1.94
SNRPA-201ENST00000243563 SPATA31A6Q5VVP1 1343 aa27.18■■□□□ 1.94
SNRPA-201ENST00000243563 RTL1A6NKG5 1358 aa27.17■■□□□ 1.94
SNRPA-201ENST00000243563 FAM83GA6ND36 823 aa27.17■■□□□ 1.94
SNRPA-201ENST00000243563 AMPHP49418 695 aa27.17■■□□□ 1.94
SNRPA-201ENST00000243563 PRDM11Q9NQV5 511 aa27.16■■□□□ 1.94
SNRPA-201ENST00000243563 ABCC6O95255 1503 aa27.16■■□□□ 1.94
SNRPA-201ENST00000243563 IP6K1Q92551 441 aa27.15■■□□□ 1.94
SNRPA-201ENST00000243563 NRAPQ86VF7 1730 aa27.15■■□□□ 1.94
SNRPA-201ENST00000243563 INSRP06213 1382 aa27.15■■□□□ 1.94
SNRPA-201ENST00000243563 KIF24Q5T7B8 1368 aa27.15■■□□□ 1.94
SNRPA-201ENST00000243563 RGPD1P0DJD0 1748 aa27.13■■□□□ 1.93
SNRPA-201ENST00000243563 MRS2Q9HD23 443 aa27.12■■□□□ 1.93
SNRPA-201ENST00000243563 CCER2I3L3R5 266 aa27.12■■□□□ 1.93
SNRPA-201ENST00000243563 EIF4A2Q14240 407 aaKnown RBP27.1■■□□□ 1.93
SNRPA-201ENST00000243563 BLMP54132 1417 aaPredicted RBP27.1■■□□□ 1.93
SNRPA-201ENST00000243563 NWD2Q9ULI1 1742 aa27.09■■□□□ 1.93
SNRPA-201ENST00000243563 LTV1Q96GA3 475 aaPredicted RBP27.09■■□□□ 1.93
SNRPA-201ENST00000243563 COL5A2P05997 1499 aaPredicted RBP27.09■■□□□ 1.93
SNRPA-201ENST00000243563 IL13P35225 146 aa27.08■■□□□ 1.93
SNRPA-201ENST00000243563 SLIT2O94813 1529 aa27.07■■□□□ 1.92
SNRPA-201ENST00000243563 ILDR1Q86SU0 546 aaPredicted RBP27.06■■□□□ 1.92
SNRPA-201ENST00000243563 CFAP53Q96M91 514 aa27.06■■□□□ 1.92
SNRPA-201ENST00000243563 ANKRD24Q8TF21 1146 aa27.05■■□□□ 1.92
SNRPA-201ENST00000243563 C8orf37Q96NL8 207 aa27.05■■□□□ 1.92
SNRPA-201ENST00000243563 BTG4Q9NY30 223 aa27.05■■□□□ 1.92
SNRPA-201ENST00000243563 FAM208AQ9UK61 1670 aaKnown RBP27.05■■□□□ 1.92
SNRPA-201ENST00000243563 DIAPH1O60610 1272 aaKnown RBP27.05■■□□□ 1.92
SNRPA-201ENST00000243563 ERBB3P21860 1342 aa27.04■■□□□ 1.92
SNRPA-201ENST00000243563 PNISRQ8TF01 805 aaKnown RBP27.03■■□□□ 1.92
SNRPA-201ENST00000243563 TNKS1BP1Q9C0C2 1729 aaKnown RBP27■■□□□ 1.91
SNRPA-201ENST00000243563 BCL9LQ86UU0 1499 aa27■■□□□ 1.91
SNRPA-201ENST00000243563 MEX3CQ5U5Q3 659 aaKnown RBP26.99■■□□□ 1.91
SNRPA-201ENST00000243563 EYA1Q99502 592 aa26.99■■□□□ 1.91
SNRPA-201ENST00000243563 STRN4Q9NRL3 753 aa26.99■■□□□ 1.91
SNRPA-201ENST00000243563 U2SURPO15042 1029 aaKnown RBP26.98■■□□□ 1.91
SNRPA-201ENST00000243563 NBPF6Q5VWK0 638 aa26.98■■□□□ 1.91
SNRPA-201ENST00000243563 USHBP1Q8N6Y0 703 aa26.98■■□□□ 1.91
SNRPA-201ENST00000243563 NGLY1Q96IV0 654 aa26.98■■□□□ 1.91
SNRPA-201ENST00000243563 NBPF4Q96M43 638 aa26.98■■□□□ 1.91
SNRPA-201ENST00000243563 LARP1Q6PKG0 1096 aaKnown RBP26.98■■□□□ 1.91
SNRPA-201ENST00000243563 AEBP1Q8IUX7 1158 aa26.97■■□□□ 1.91
SNRPA-201ENST00000243563 WDR17Q8IZU2 1322 aa26.96■■□□□ 1.91
SNRPA-201ENST00000243563 IGSF1Q8N6C5 1336 aa26.96■■□□□ 1.91
SNRPA-201ENST00000243563 FNBP4Q8N3X1 1017 aaPredicted RBP26.96■■□□□ 1.91
SNRPA-201ENST00000243563 FAM9BQ8IZU0 186 aa26.95■■□□□ 1.91
SNRPA-201ENST00000243563 ADAMTS8Q9UP79 889 aa26.95■■□□□ 1.91
SNRPA-201ENST00000243563 NCAPD2Q15021 1401 aa26.95■■□□□ 1.9
SNRPA-201ENST00000243563 WNK3Q9BYP7 1800 aa26.94■■□□□ 1.9
SNRPA-201ENST00000243563 AFF2P51816 1311 aa26.94■■□□□ 1.9
SNRPA-201ENST00000243563 HMOX1P09601 288 aa26.94■■□□□ 1.9
SNRPA-201ENST00000243563 CSB-PGBD3P0DP91 1061 aa26.94■■□□□ 1.9
SNRPA-201ENST00000243563 U2AF1L5P0DN76 240 aaPredicted RBP26.93■■□□□ 1.9
SNRPA-201ENST00000243563 U2AF1Q01081 240 aaKnown RBP eCLIP26.93■■□□□ 1.9
SNRPA-201ENST00000243563 EVA1CP58658 441 aa26.92■■□□□ 1.9
SNRPA-201ENST00000243563 NLRP2Q9NX02 1062 aa26.92■■□□□ 1.9
SNRPA-201ENST00000243563 NUDCQ9Y266 331 aa26.92■■□□□ 1.9
SNRPA-201ENST00000243563 CRB1P82279 1406 aa26.92■■□□□ 1.9
SNRPA-201ENST00000243563 WDR43Q15061 677 aaKnown RBP eCLIP26.91■■□□□ 1.9
SNRPA-201ENST00000243563 SULT6B1Q6IMI4 303 aa26.9■■□□□ 1.9
SNRPA-201ENST00000243563 UNC5CLQ8IV45 518 aa26.9■■□□□ 1.9
SNRPA-201ENST00000243563 TOM1L2Q6ZVM7 507 aa26.9■■□□□ 1.9
SNRPA-201ENST00000243563 USP21Q9UK80 565 aa26.9■■□□□ 1.9
SNRPA-201ENST00000243563 KDRP35968 1356 aa26.89■■□□□ 1.9
SNRPA-201ENST00000243563 RSPH6AQ9H0K4 717 aa26.89■■□□□ 1.9
SNRPA-201ENST00000243563 CCDC146Q8IYE0 955 aa26.87■■□□□ 1.89
SNRPA-201ENST00000243563 MEGF6O75095 1541 aa26.86■■□□□ 1.89
SNRPA-201ENST00000243563 GLI3P10071 1580 aa26.86■■□□□ 1.89
SNRPA-201ENST00000243563 USP35Q9P2H5 1018 aa26.86■■□□□ 1.89
SNRPA-201ENST00000243563 SENP3-EIF4A1A0A087X0R7 540 aa26.85■■□□□ 1.89
SNRPA-201ENST00000243563 CARD10Q9BWT7 1032 aa26.85■■□□□ 1.89
SNRPA-201ENST00000243563 ATRNO75882 1429 aa26.84■■□□□ 1.89
SNRPA-201ENST00000243563 PRKAR2BP31323 418 aa26.83■■□□□ 1.89
SNRPA-201ENST00000243563 PLEKHF1Q96S99 279 aa26.83■■□□□ 1.89
SNRPA-201ENST00000243563 PARP4Q9UKK3 1724 aaKnown RBP26.83■■□□□ 1.89
SNRPA-201ENST00000243563 SPATA31A1Q5TZJ5 1347 aa26.83■■□□□ 1.89
SNRPA-201ENST00000243563 SPATA31A5Q5VU36 1347 aa26.83■■□□□ 1.89
SNRPA-201ENST00000243563 SPATA31A7Q8IWB4 1347 aa26.83■■□□□ 1.89
SNRPA-201ENST00000243563 SHANK3Q9BYB0 1731 aa26.83■■□□□ 1.89
SNRPA-201ENST00000243563 VPS72Q15906 364 aa26.82■■□□□ 1.88
SNRPA-201ENST00000243563 DLG5Q8TDM6 1919 aa26.81■■□□□ 1.88
SNRPA-201ENST00000243563 PHACTR3Q96KR7 559 aa26.81■■□□□ 1.88
SNRPA-201ENST00000243563 PKD1L3Q7Z443 1732 aa26.8■■□□□ 1.88
SNRPA-201ENST00000243563 DISP2A7MBM2 1401 aa26.8■■□□□ 1.88
SNRPA-201ENST00000243563 FCHSD2O94868 740 aa26.8■■□□□ 1.88
SNRPA-201ENST00000243563 RGS17Q9UGC6 210 aaPredicted RBP26.79■■□□□ 1.88
SNRPA-201ENST00000243563 CCDC9Q9Y3X0 531 aaKnown RBP26.79■■□□□ 1.88
SNRPA-201ENST00000243563 LRRC37A3O60309 1634 aa26.76■■□□□ 1.87
SNRPA-201ENST00000243563 TCP11L2Q8N4U5 519 aa26.76■■□□□ 1.87
SNRPA-201ENST00000243563 THSD7AQ9UPZ6 1657 aa26.75■■□□□ 1.87
SNRPA-201ENST00000243563 RUNDC1Q96C34 613 aa26.75■■□□□ 1.87
SNRPA-201ENST00000243563 OVOS2A0A0G2JMS6 1433 aa26.75■■□□□ 1.87
SNRPA-201ENST00000243563 QTRT2Q9H974 415 aaKnown RBP26.74■■□□□ 1.87
SNRPA-201ENST00000243563 TRPC5Q9UL62 973 aaPredicted RBP26.74■■□□□ 1.87
SNRPA-201ENST00000243563 VIRMAQ69YN4 1812 aaKnown RBP26.72■■□□□ 1.87
SNRPA-201ENST00000243563 IL2RBP14784 551 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms