RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 CENPQQ7L2Z9 268 aaPredicted RBP12.1□□□□□ -0.47
SLF2-201ENST00000238961 STAC3Q96MF2 364 aa12.1□□□□□ -0.47
SLF2-201ENST00000238961 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
SLF2-201ENST00000238961 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
SLF2-201ENST00000238961 CRBNQ96SW2 442 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 ATF3P18847 181 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 CCDC57Q2TAC2 916 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 LMAN1P49257 510 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 PPP1R9BQ96SB3 815 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 LIG1P18858 919 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 TRAK1Q9UPV9 953 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 IFFO1Q0D2I5 559 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
SLF2-201ENST00000238961 PKD2Q13563 968 aa12.08□□□□□ -0.47
SLF2-201ENST00000238961 DZIP1LQ8IYY4 767 aaKnown RBP12.08□□□□□ -0.47
SLF2-201ENST00000238961 TRIM22Q8IYM9 498 aa12.08□□□□□ -0.48
SLF2-201ENST00000238961 EIF5P55010 431 aaKnown RBP12.08□□□□□ -0.48
SLF2-201ENST00000238961 LETM1O95202 739 aaPredicted RBP12.08□□□□□ -0.48
SLF2-201ENST00000238961 RFX1P22670 979 aa12.08□□□□□ -0.48
SLF2-201ENST00000238961 CNTROBQ8N137 903 aa12.08□□□□□ -0.48
SLF2-201ENST00000238961 ROCK1Q13464 1354 aa12.08□□□□□ -0.48
SLF2-201ENST00000238961 GCOM1H8Y6P7 765 aaPredicted RBP12.08□□□□□ -0.48
SLF2-201ENST00000238961 MYZAPP0CAP1 466 aa12.08□□□□□ -0.48
SLF2-201ENST00000238961 MTERF4Q7Z6M4 381 aaKnown RBP12.08□□□□□ -0.48
SLF2-201ENST00000238961 NDC80O14777 642 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 SEPT6Q14141 434 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 TNNT1P13805 278 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 TMOD2Q9NZR1 351 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
SLF2-201ENST00000238961 PSMC4P43686 418 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 ZNF710Q8N1W2 664 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 PPP1R14CQ8TAE6 165 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 SEPT10Q9P0V9 454 aa12.07□□□□□ -0.48
SLF2-201ENST00000238961 KIF7Q2M1P5 1343 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 TMCO3Q6UWJ1 677 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 OTUD6BQ8N6M0 293 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
SLF2-201ENST00000238961 ZNF397Q8NF99 534 aaPredicted RBP12.06□□□□□ -0.48
SLF2-201ENST00000238961 RUSC2Q8N2Y8 1516 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 NAP1L3Q99457 506 aaPredicted RBP12.06□□□□□ -0.48
SLF2-201ENST00000238961 FERMT1Q9BQL6 677 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 CCDC160A6NGH7 325 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 TTC36A6NLP5 189 aa12.06□□□□□ -0.48
SLF2-201ENST00000238961 VTI1AQ96AJ9 217 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 UBA5Q9GZZ9 404 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 C6orf163Q5TEZ5 329 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 TPD52P55327 224 aaPredicted RBP12.05□□□□□ -0.48
SLF2-201ENST00000238961 CCDC158Q5M9N0 1113 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 PRPF31Q8WWY3 499 aaKnown RBP12.05□□□□□ -0.48
SLF2-201ENST00000238961 NACAP1Q9BZK3 213 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 GRM1Q13255 1194 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.05□□□□□ -0.48
SLF2-201ENST00000238961 RNF187Q5TA31 235 aaPredicted RBP12.05□□□□□ -0.48
SLF2-201ENST00000238961 CCDC148Q8NFR7 591 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 CFAP58Q5T655 872 aa12.05□□□□□ -0.48
SLF2-201ENST00000238961 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
SLF2-201ENST00000238961 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
SLF2-201ENST00000238961 NUTM2BA6NNL0 878 aaPredicted RBP12.04□□□□□ -0.48
SLF2-201ENST00000238961 NUTM2EB1AL46 878 aaPredicted RBP12.04□□□□□ -0.48
SLF2-201ENST00000238961 NUTM2AQ8IVF1 878 aaPredicted RBP12.04□□□□□ -0.48
SLF2-201ENST00000238961 LRRC45Q96CN5 670 aa12.04□□□□□ -0.48
SLF2-201ENST00000238961 CRACR2AQ9BSW2 395 aa12.04□□□□□ -0.48
SLF2-201ENST00000238961 TSPY26PQ9H489 355 aa12.04□□□□□ -0.48
SLF2-201ENST00000238961 UBTFL1P0CB47 393 aaPredicted RBP12.03□□□□□ -0.48
SLF2-201ENST00000238961 JPH4Q96JJ6 628 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.03□□□□□ -0.48
SLF2-201ENST00000238961 V9GYY5 206 aaPredicted RBP12.03□□□□□ -0.48
SLF2-201ENST00000238961 CC2D2AQ9P2K1 1620 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 API5Q9BZZ5 524 aaKnown RBP12.03□□□□□ -0.48
SLF2-201ENST00000238961 FHAD1B1AJZ9 1412 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 CBFA2T2O43439 604 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 DNA2P51530 1060 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 ME1P48163 572 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 STK3Q13188 491 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 CEP57L1Q8IYX8 460 aa12.03□□□□□ -0.48
SLF2-201ENST00000238961 SREK1Q8WXA9 508 aaKnown RBP12.03□□□□□ -0.48
SLF2-201ENST00000238961 FSD2A1L4K1 749 aa12.02□□□□□ -0.48
SLF2-201ENST00000238961 LUZP1Q86V48 1076 aa12.02□□□□□ -0.48
SLF2-201ENST00000238961 DDX19BQ9UMR2 479 aa12.02□□□□□ -0.48
SLF2-201ENST00000238961 UNC13AQ9UPW8 1703 aa12.02□□□□□ -0.48
SLF2-201ENST00000238961 SATB1Q01826 763 aa12.02□□□□□ -0.49
SLF2-201ENST00000238961 STRN4Q9NRL3 753 aa12.02□□□□□ -0.49
SLF2-201ENST00000238961 ODF2LQ9ULJ1 636 aa12.02□□□□□ -0.49
SLF2-201ENST00000238961 KIF5CO60282 957 aa12.02□□□□□ -0.49
SLF2-201ENST00000238961 BIRC2Q13490 618 aa12.02□□□□□ -0.49
SLF2-201ENST00000238961 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
SLF2-201ENST00000238961 PUF60Q9UHX1 559 aaKnown RBP12.01□□□□□ -0.49
SLF2-201ENST00000238961 VGFO15240 615 aaPredicted RBP12.01□□□□□ -0.49
SLF2-201ENST00000238961 SPA17Q15506 151 aa12.01□□□□□ -0.49
SLF2-201ENST00000238961 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
SLF2-201ENST00000238961 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
SLF2-201ENST00000238961 MXRA7P84157 204 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms