RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FHOD3Q2V2M9 1422 aa15.21■□□□□ 0.03
VAMP4-201ENST00000236192 KRT85P78386 507 aa15.21■□□□□ 0.03
VAMP4-201ENST00000236192 ROCK1Q13464 1354 aa15.21■□□□□ 0.03
VAMP4-201ENST00000236192 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
VAMP4-201ENST00000236192 KDM4AO75164 1064 aa15.21■□□□□ 0.03
VAMP4-201ENST00000236192 TUBB4AP04350 444 aa15.21■□□□□ 0.03
VAMP4-201ENST00000236192 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.02
VAMP4-201ENST00000236192 ARFGAP3Q9NP61 516 aa15.21■□□□□ 0.02
VAMP4-201ENST00000236192 PDILTQ8N807 584 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 IBTKQ9P2D0 1353 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-201ENST00000236192 GSDMDP57764 484 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 JAKMIP3Q5VZ66 844 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 PLCD4Q9BRC7 762 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 CCDC186Q7Z3E2 898 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 API5Q9BZZ5 524 aaKnown RBP15.2■□□□□ 0.02
VAMP4-201ENST00000236192 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 ZBTB22O15209 634 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 ZKSCAN1P17029 563 aaPredicted RBP15.2■□□□□ 0.02
VAMP4-201ENST00000236192 PDCP20941 246 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 KIAA1328Q86T90 577 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
VAMP4-201ENST00000236192 KINO60870 393 aaKnown RBP15.19■□□□□ 0.02
VAMP4-201ENST00000236192 ZSCAN26Q16670 478 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 CHMP4CQ96CF2 233 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 ZSCAN12O43309 604 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 TICAM2Q86XR7 235 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 GOLGA6L7A0A1B0GV03 622 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 SYCP1Q15431 976 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 TIAM1Q13009 1591 aa15.19■□□□□ 0.02
VAMP4-201ENST00000236192 SFPQP23246 707 aaKnown RBP eCLIP15.18■□□□□ 0.02
VAMP4-201ENST00000236192 TERF2Q15554 542 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 ICE2Q659A1 982 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 ZNF526Q8TF50 670 aaPredicted RBP15.18■□□□□ 0.02
VAMP4-201ENST00000236192 SRRTQ9BXP5 876 aaKnown RBP15.18■□□□□ 0.02
VAMP4-201ENST00000236192 BMP2KLQ5H9B9 411 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 RPAINQ86UA6 219 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 FAM177A1Q8N128 213 aaPredicted RBP15.18■□□□□ 0.02
VAMP4-201ENST00000236192 C17orf53Q8N3J3 647 aaPredicted RBP15.18■□□□□ 0.02
VAMP4-201ENST00000236192 MX1P20591 662 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 IBSPP21815 317 aaPredicted RBP15.18■□□□□ 0.02
VAMP4-201ENST00000236192 MYO6Q9UM54 1294 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 MPHOSPH10O00566 681 aaKnown RBP15.18■□□□□ 0.02
VAMP4-201ENST00000236192 GAS2L2Q8NHY3 880 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 RUFY2Q8WXA3 655 aa15.18■□□□□ 0.02
VAMP4-201ENST00000236192 DYDC1Q8WWB3 177 aa15.17■□□□□ 0.02
VAMP4-201ENST00000236192 SDF4Q9BRK5 362 aa15.17■□□□□ 0.02
VAMP4-201ENST00000236192 CPSF2Q9P2I0 782 aaKnown RBP15.17■□□□□ 0.02
VAMP4-201ENST00000236192 UBE2HP62256 183 aa15.17■□□□□ 0.02
VAMP4-201ENST00000236192 WDR63Q8IWG1 891 aa15.17■□□□□ 0.02
VAMP4-201ENST00000236192 STK31Q9BXU1 1019 aa15.17■□□□□ 0.02
VAMP4-201ENST00000236192 CEP57L1Q8IYX8 460 aa15.16■□□□□ 0.02
VAMP4-201ENST00000236192 SMARCC1Q92922 1105 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-201ENST00000236192 CBFA2T2O43439 604 aa15.16■□□□□ 0.02
VAMP4-201ENST00000236192 GBP2P32456 591 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-201ENST00000236192 ARHGAP29Q52LW3 1261 aa15.16■□□□□ 0.02
VAMP4-201ENST00000236192 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
VAMP4-201ENST00000236192 IPO7O95373 1038 aaKnown RBP15.16■□□□□ 0.02
VAMP4-201ENST00000236192 PTGS1P23219 599 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
VAMP4-201ENST00000236192 ATF7IPQ6VMQ6 1270 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 MAP9Q49MG5 647 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 ZBTB9Q96C00 473 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 CAMK4Q16566 473 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 NBPF11Q86T75 865 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 CRACR2AQ9BSW2 395 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 YY1AP1Q9H869 796 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 OLFM4Q6UX06 510 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 JRKLQ9Y4A0 524 aa15.15■□□□□ 0.02
VAMP4-201ENST00000236192 LOC102724159A0A0B4J2E5 919 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 A0A1B0GUA9 196 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 MCM3P25205 808 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 PWP2Q15269 919 aaKnown RBP15.14■□□□□ 0.01
VAMP4-201ENST00000236192 FMNL3Q8IVF7 1028 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
VAMP4-201ENST00000236192 RARSP54136 660 aaKnown RBP15.14■□□□□ 0.01
VAMP4-201ENST00000236192 FAM200AQ8TCP9 573 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 GEMIN8Q9NWZ8 242 aaKnown RBP15.14■□□□□ 0.01
VAMP4-201ENST00000236192 CAVIN2O95810 425 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 SKILP12757 684 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 TBC1D9Q6ZT07 1266 aa15.14■□□□□ 0.01
VAMP4-201ENST00000236192 CASTP20810 708 aaKnown RBP15.13■□□□□ 0.01
VAMP4-201ENST00000236192 ELF2Q15723 593 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 RRP12Q5JTH9 1297 aaKnown RBP15.13■□□□□ 0.01
VAMP4-201ENST00000236192 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 GOLGA5Q8TBA6 731 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 VPS18Q9P253 973 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 HOOK1Q9UJC3 728 aaKnown RBP15.13■□□□□ 0.01
VAMP4-201ENST00000236192 MRVI1Q9Y6F6 885 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 GDPD2Q9HCC8 539 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 EZRP15311 586 aaKnown RBP15.13■□□□□ 0.01
VAMP4-201ENST00000236192 SPATA32Q96LK8 384 aa15.13■□□□□ 0.01
VAMP4-201ENST00000236192 MKRN1Q9UHC7 482 aaKnown RBP15.13■□□□□ 0.01
VAMP4-201ENST00000236192 KIF1CO43896 1103 aaKnown RBP15.12■□□□□ 0.01
VAMP4-201ENST00000236192 HNRNPH2P55795 449 aaKnown RBP15.12■□□□□ 0.01
VAMP4-201ENST00000236192 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
VAMP4-201ENST00000236192 UPF3BQ9BZI7 483 aaKnown RBP15.12■□□□□ 0.01
VAMP4-201ENST00000236192 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms