RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 ABTB2Q8N961 1025 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 MINK1Q8N4C8 1332 aaPredicted RBP3.3□□□□□ -1.88
PRKD3-201ENST00000234179 NUP188Q5SRE5 1749 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 SLIT3O75094 1523 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 SLC15A2Q16348 729 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 ARXQ96QS3 562 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 COL5A2P05997 1499 aaPredicted RBP3.3□□□□□ -1.88
PRKD3-201ENST00000234179 PHRF1Q9P1Y6 1649 aaKnown RBP3.3□□□□□ -1.88
PRKD3-201ENST00000234179 SENP3-EIF4A1A0A087X0R7 540 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 GCP02774 474 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 EVC2Q86UK5 1308 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 CENPJQ9HC77 1338 aaPredicted RBP3.3□□□□□ -1.88
PRKD3-201ENST00000234179 CRYBG1Q9Y4K1 1723 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 PRR36Q9H6K5 1346 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 PLEKHG2Q9H7P9 1386 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 NRKQ7Z2Y5 1582 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 LMO7Q8WWI1 1683 aa3.3□□□□□ -1.88
PRKD3-201ENST00000234179 TOM1L2Q6ZVM7 507 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 ACEP12821 1306 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 CGNL1Q0VF96 1302 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 TNS2Q63HR2 1409 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 ZNF784Q8NCA9 323 aaPredicted RBP3.29□□□□□ -1.88
PRKD3-201ENST00000234179 CDK19Q9BWU1 502 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 TRAK1Q9UPV9 953 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 SBNO2Q9Y2G9 1366 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 TXNRD1Q16881 649 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 TRPM1Q7Z4N2 1603 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 CPSF1Q10570 1443 aaKnown RBP3.29□□□□□ -1.88
PRKD3-201ENST00000234179 USP31Q70CQ4 1352 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 CSB-PGBD3P0DP91 1061 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 TOPAZ1Q8N9V7 1692 aa3.29□□□□□ -1.88
PRKD3-201ENST00000234179 ZC3H6P61129 1189 aaKnown RBP3.29□□□□□ -1.88
PRKD3-201ENST00000234179 USP6P35125 1406 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 NLRP6P59044 892 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 LARP1Q6PKG0 1096 aaKnown RBP3.28□□□□□ -1.88
PRKD3-201ENST00000234179 SRPK2P78362 688 aaKnown RBP3.28□□□□□ -1.88
PRKD3-201ENST00000234179 GPR162Q16538 588 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 SYT17Q9BSW7 474 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 PPIP5K1Q6PFW1 1433 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 CD2APQ9Y5K6 639 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 QRICH2Q9H0J4 1663 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 CASZ1Q86V15 1759 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 DCAF11Q8TEB1 546 aa3.28□□□□□ -1.88
PRKD3-201ENST00000234179 CHRNA2Q15822 529 aa3.28□□□□□ -1.89
PRKD3-201ENST00000234179 ARHGEF25Q86VW2 580 aa3.28□□□□□ -1.89
PRKD3-201ENST00000234179 SMARCC1Q92922 1105 aaPredicted RBP3.28□□□□□ -1.89
PRKD3-201ENST00000234179 PEAK1Q9H792 1746 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 IL2RBP14784 551 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 SAFB2Q14151 953 aaKnown RBP eCLIP3.27□□□□□ -1.89
PRKD3-201ENST00000234179 KIF24Q5T7B8 1368 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 KCNA4P22459 653 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 HDGFL2Q7Z4V5 671 aaPredicted RBP3.27□□□□□ -1.89
PRKD3-201ENST00000234179 TERF2IPQ9NYB0 399 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 RTL1A6NKG5 1358 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 LRRC37A3O60309 1634 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 QSER1Q2KHR3 1735 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 ARHGEF28Q8N1W1 1705 aaKnown RBP3.27□□□□□ -1.89
PRKD3-201ENST00000234179 PTGER2P43116 358 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 SGIP1Q9BQI5 828 aa3.27□□□□□ -1.89
PRKD3-201ENST00000234179 FHDC1Q9C0D6 1143 aaPredicted RBP3.26□□□□□ -1.89
PRKD3-201ENST00000234179 CHD4Q14839 1912 aa3.26□□□□□ -1.89
PRKD3-201ENST00000234179 TTC21BQ7Z4L5 1316 aa3.26□□□□□ -1.89
PRKD3-201ENST00000234179 USP35Q9P2H5 1018 aa3.26□□□□□ -1.89
PRKD3-201ENST00000234179 NHSQ6T4R5 1651 aa3.26□□□□□ -1.89
PRKD3-201ENST00000234179 APLP1P51693 650 aa3.26□□□□□ -1.89
PRKD3-201ENST00000234179 HIRIP3Q9BW71 556 aaPredicted RBP3.26□□□□□ -1.89
PRKD3-201ENST00000234179 FAM208AQ9UK61 1670 aaKnown RBP3.26□□□□□ -1.89
PRKD3-201ENST00000234179 HSPA6P17066 643 aa3.26□□□□□ -1.89
PRKD3-201ENST00000234179 MARCH10Q8NA82 808 aaPredicted RBP3.26□□□□□ -1.89
PRKD3-201ENST00000234179 NSD2O96028 1365 aa3.26□□□□□ -1.89
PRKD3-201ENST00000234179 SMG6Q86US8 1419 aaKnown RBP3.26□□□□□ -1.89
PRKD3-201ENST00000234179 ATF5Q9Y2D1 282 aaPredicted RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 USP54Q70EL1 1684 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 ZC3H4Q9UPT8 1303 aaKnown RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 ANKRD36BQ8N2N9 1353 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 RAB3GAP2Q9H2M9 1393 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 C10orf71Q711Q0 1435 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 ZBTB7AO95365 584 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 GPBP1L1Q9HC44 474 aaPredicted RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 ANO8Q9HCE9 1232 aaPredicted RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 U3KPZ7 1027 aaPredicted RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 RGPD8O14715 1765 aaPredicted RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 CDCA8Q53HL2 280 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 AKAP12Q02952 1782 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 ERBB3P21860 1342 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 EDC4Q6P2E9 1401 aaKnown RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 WNK3Q9BYP7 1800 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 NLRP2Q9NX02 1062 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 KTN1Q86UP2 1357 aaKnown RBP3.25□□□□□ -1.89
PRKD3-201ENST00000234179 PAPPAQ13219 1627 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 AKT1S1Q96B36 256 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 KDM2AQ9Y2K7 1162 aa3.25□□□□□ -1.89
PRKD3-201ENST00000234179 COL24A1Q17RW2 1714 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 PLEKHG5O94827 1062 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 KAT6BQ8WYB5 2073 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 FAM182BQ5T319 152 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 TFCP2L1Q9NZI6 479 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 USP47Q96K76 1375 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 CABP1Q9NZU7 370 aa3.24□□□□□ -1.89
PRKD3-201ENST00000234179 PDZRN3Q9UPQ7 1066 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms