RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TMEM57Q8N5G2 664 aa27.88■■■□□ 2.05
SMARCD2-201ENST00000225742 ZBTB40Q9NUA8 1239 aa27.88■■■□□ 2.05
SMARCD2-201ENST00000225742 SMC5Q8IY18 1101 aa27.88■■■□□ 2.05
SMARCD2-201ENST00000225742 NRKQ7Z2Y5 1582 aa27.87■■■□□ 2.05
SMARCD2-201ENST00000225742 PHACTR3Q96KR7 559 aa27.87■■■□□ 2.05
SMARCD2-201ENST00000225742 ZNF853P0CG23 659 aa27.86■■■□□ 2.05
SMARCD2-201ENST00000225742 ADAMTS13Q76LX8 1427 aa27.86■■■□□ 2.05
SMARCD2-201ENST00000225742 PLEKHG1Q9ULL1 1385 aa27.86■■■□□ 2.05
SMARCD2-201ENST00000225742 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
SMARCD2-201ENST00000225742 SEC24BO95487 1268 aa27.85■■■□□ 2.05
SMARCD2-201ENST00000225742 HMOX1P09601 288 aa27.85■■■□□ 2.05
SMARCD2-201ENST00000225742 FBLN1P23142 703 aa27.85■■■□□ 2.05
SMARCD2-201ENST00000225742 PIK3R4Q99570 1358 aa27.84■■■□□ 2.05
SMARCD2-201ENST00000225742 NFKBIBQ15653 356 aa27.84■■■□□ 2.05
SMARCD2-201ENST00000225742 PTCH1Q13635 1447 aa27.83■■■□□ 2.05
SMARCD2-201ENST00000225742 VAMP4O75379 141 aa27.83■■■□□ 2.05
SMARCD2-201ENST00000225742 TBC1D32Q96NH3 1257 aa27.82■■■□□ 2.04
SMARCD2-201ENST00000225742 DLG5Q8TDM6 1919 aa27.82■■■□□ 2.04
SMARCD2-201ENST00000225742 ROBO2Q9HCK4 1378 aa27.82■■■□□ 2.04
SMARCD2-201ENST00000225742 MRPL50Q8N5N7 158 aaKnown RBP27.81■■■□□ 2.04
SMARCD2-201ENST00000225742 PRR36Q9H6K5 1346 aa27.81■■■□□ 2.04
SMARCD2-201ENST00000225742 ZRANB1Q9UGI0 708 aa27.81■■■□□ 2.04
SMARCD2-201ENST00000225742 PLEKHG3A1L390 1219 aa27.8■■■□□ 2.04
SMARCD2-201ENST00000225742 CFAP44Q96MT7 982 aa27.79■■■□□ 2.04
SMARCD2-201ENST00000225742 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.79■■■□□ 2.04
SMARCD2-201ENST00000225742 TTC21BQ7Z4L5 1316 aa27.76■■■□□ 2.04
SMARCD2-201ENST00000225742 MBIPQ9NS73 344 aa27.76■■■□□ 2.04
SMARCD2-201ENST00000225742 NALCNQ8IZF0 1738 aa27.76■■■□□ 2.03
SMARCD2-201ENST00000225742 NCKAP5LQ9HCH0 1330 aa27.75■■■□□ 2.03
SMARCD2-201ENST00000225742 OVOS2A0A0J9YW53 1432 aa27.75■■■□□ 2.03
SMARCD2-201ENST00000225742 OVOS2Q6IE36 1432 aa27.75■■■□□ 2.03
SMARCD2-201ENST00000225742 NUCB1Q02818 461 aa27.74■■■□□ 2.03
SMARCD2-201ENST00000225742 RRS1Q15050 365 aaKnown RBP27.74■■■□□ 2.03
SMARCD2-201ENST00000225742 KIF24Q5T7B8 1368 aa27.73■■■□□ 2.03
SMARCD2-201ENST00000225742 HAP1P54257 671 aaPredicted RBP27.72■■■□□ 2.03
SMARCD2-201ENST00000225742 THUMPD2Q9BTF0 503 aaKnown RBP27.72■■■□□ 2.03
SMARCD2-201ENST00000225742 ABCC4O15439 1325 aa27.72■■■□□ 2.03
SMARCD2-201ENST00000225742 USP6P35125 1406 aa27.72■■■□□ 2.03
SMARCD2-201ENST00000225742 ZBTB7BO15156 539 aaPredicted RBP27.71■■■□□ 2.03
SMARCD2-201ENST00000225742 TWISTNBQ3B726 338 aaPredicted RBP27.71■■■□□ 2.03
SMARCD2-201ENST00000225742 API5Q9BZZ5 524 aaKnown RBP27.71■■■□□ 2.03
SMARCD2-201ENST00000225742 USP31Q70CQ4 1352 aa27.71■■■□□ 2.03
SMARCD2-201ENST00000225742 ACEP12821 1306 aa27.7■■■□□ 2.03
SMARCD2-201ENST00000225742 SLIT1O75093 1534 aa27.7■■■□□ 2.03
SMARCD2-201ENST00000225742 GCC1Q96CN9 775 aa27.7■■■□□ 2.02
SMARCD2-201ENST00000225742 EID1Q9Y6B2 187 aa27.69■■■□□ 2.02
SMARCD2-201ENST00000225742 ARHGAP23Q9P227 1491 aa27.69■■■□□ 2.02
SMARCD2-201ENST00000225742 TSPYL6Q8N831 410 aa27.69■■■□□ 2.02
SMARCD2-201ENST00000225742 LTKP29376 864 aa27.68■■■□□ 2.02
SMARCD2-201ENST00000225742 RGPD1P0DJD0 1748 aa27.67■■■□□ 2.02
SMARCD2-201ENST00000225742 EIF4A2Q14240 407 aaKnown RBP27.67■■■□□ 2.02
SMARCD2-201ENST00000225742 SSH2Q76I76 1423 aa27.67■■■□□ 2.02
SMARCD2-201ENST00000225742 TTC21AQ8NDW8 1320 aa27.66■■■□□ 2.02
SMARCD2-201ENST00000225742 GSE1Q14687 1217 aa27.66■■■□□ 2.02
SMARCD2-201ENST00000225742 CHD1LQ86WJ1 897 aa27.66■■■□□ 2.02
SMARCD2-201ENST00000225742 DIP2AQ14689 1571 aa27.66■■■□□ 2.02
SMARCD2-201ENST00000225742 PTPRUQ92729 1446 aa27.65■■■□□ 2.02
SMARCD2-201ENST00000225742 TBX22Q9Y458 520 aa27.64■■■□□ 2.02
SMARCD2-201ENST00000225742 C8orf58Q8NAV2 365 aa27.64■■■□□ 2.01
SMARCD2-201ENST00000225742 C22orf23Q9BZE7 217 aa27.64■■■□□ 2.01
SMARCD2-201ENST00000225742 KIAA0232Q92628 1395 aa27.62■■■□□ 2.01
SMARCD2-201ENST00000225742 PEAK1Q9H792 1746 aa27.62■■■□□ 2.01
SMARCD2-201ENST00000225742 SULT6B1Q6IMI4 303 aa27.62■■■□□ 2.01
SMARCD2-201ENST00000225742 RIMS1Q86UR5 1692 aaKnown RBP27.62■■■□□ 2.01
SMARCD2-201ENST00000225742 ARHGEF10O15013 1369 aa27.6■■■□□ 2.01
SMARCD2-201ENST00000225742 TBC1D2Q9BYX2 928 aa27.6■■■□□ 2.01
SMARCD2-201ENST00000225742 CHL1O00533 1208 aa27.59■■■□□ 2.01
SMARCD2-201ENST00000225742 FRAT2O75474 233 aaPredicted RBP27.59■■■□□ 2.01
SMARCD2-201ENST00000225742 BMP2KLQ5H9B9 411 aa27.59■■■□□ 2.01
SMARCD2-201ENST00000225742 FAM83GA6ND36 823 aa27.58■■■□□ 2.01
SMARCD2-201ENST00000225742 ANTXR1Q9H6X2 564 aa27.58■■■□□ 2.01
SMARCD2-201ENST00000225742 FMN2Q9NZ56 1722 aa27.58■■■□□ 2.01
SMARCD2-201ENST00000225742 ELL2O00472 640 aaPredicted RBP27.57■■■□□ 2
SMARCD2-201ENST00000225742 AEBP1Q8IUX7 1158 aa27.57■■■□□ 2
SMARCD2-201ENST00000225742 LNPKQ9C0E8 428 aa27.57■■■□□ 2
SMARCD2-201ENST00000225742 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
SMARCD2-201ENST00000225742 MFAP1P55081 439 aaKnown RBP27.56■■■□□ 2
SMARCD2-201ENST00000225742 INTS3Q68E01 1043 aaKnown RBP27.55■■■□□ 2
SMARCD2-201ENST00000225742 DCTN1Q14203 1278 aa27.54■■■□□ 2
SMARCD2-201ENST00000225742 SBNO1A3KN83 1393 aa27.54■■■□□ 2
SMARCD2-201ENST00000225742 EIF5BO60841 1220 aaKnown RBP27.53■■■□□ 2
SMARCD2-201ENST00000225742 ANKRD45Q5TZF3 282 aa27.53■■■□□ 2
SMARCD2-201ENST00000225742 SLC26A8Q96RN1 970 aa27.53■■■□□ 2
SMARCD2-201ENST00000225742 RBM25P49756 843 aaKnown RBP27.53■■■□□ 2
SMARCD2-201ENST00000225742 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
SMARCD2-201ENST00000225742 FLT4P35916 1363 aa27.52■■■□□ 2
SMARCD2-201ENST00000225742 HSP90AB2PQ58FF8 381 aa27.52■■■□□ 2
SMARCD2-201ENST00000225742 XRN1Q8IZH2 1706 aaKnown RBP27.52■■■□□ 2
SMARCD2-201ENST00000225742 ANKARQ7Z5J8 1434 aa27.52■■■□□ 2
SMARCD2-201ENST00000225742 PTPRCP08575 1304 aa27.52■■■□□ 2
SMARCD2-201ENST00000225742 FER1L4A9Z1Z3 1794 aa27.52■■■□□ 2
SMARCD2-201ENST00000225742 SIRT2Q8IXJ6 389 aa27.51■■□□□ 1.99
SMARCD2-201ENST00000225742 CRB1P82279 1406 aa27.5■■□□□ 1.99
SMARCD2-201ENST00000225742 CEBPAP49715 358 aaPredicted RBP27.49■■□□□ 1.99
SMARCD2-201ENST00000225742 SLKQ9H2G2 1235 aaPredicted RBP27.49■■□□□ 1.99
SMARCD2-201ENST00000225742 KDRP35968 1356 aa27.49■■□□□ 1.99
SMARCD2-201ENST00000225742 C1orf115Q9H7X2 142 aa27.48■■□□□ 1.99
SMARCD2-201ENST00000225742 MAP3K19Q56UN5 1328 aa27.48■■□□□ 1.99
SMARCD2-201ENST00000225742 USP54Q70EL1 1684 aa27.48■■□□□ 1.99
SMARCD2-201ENST00000225742 NUTM2FA1L443 756 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms