RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 NCAPGQ9BPX3 1015 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 BCL2L13Q9BXK5 485 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 HDAC9Q9UKV0 1011 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 REC8O95072 547 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 CNGA1P29973 690 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 LMAN1P49257 510 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 BRDTQ58F21 947 aaPredicted RBP4.06□□□□□ -1.76
NEB-201ENST00000172853 HIP1O00291 1037 aa4.06□□□□□ -1.76
NEB-201ENST00000172853 IGHMBP2P38935 993 aaKnown RBP4.05□□□□□ -1.76
NEB-201ENST00000172853 APBB1IPQ7Z5R6 666 aaPredicted RBP4.05□□□□□ -1.76
NEB-201ENST00000172853 SEPT10Q9P0V9 454 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 SETD5Q9C0A6 1442 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 CWC15Q9P013 229 aaKnown RBP4.05□□□□□ -1.76
NEB-201ENST00000172853 TRAF1Q13077 416 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 STXBP4Q6ZWJ1 553 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 RSPH6AQ9H0K4 717 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 OPA1O60313 960 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 MPHOSPH8Q99549 860 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 PRDM10Q9NQV6 1147 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 EVC2Q86UK5 1308 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 CGNL1Q0VF96 1302 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 TAX1BP1Q86VP1 789 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 AIDAQ96BJ3 306 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 CABP5Q9NP86 173 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 KIF7Q2M1P5 1343 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 KIF22Q14807 665 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.05□□□□□ -1.76
NEB-201ENST00000172853 IQCEQ6IPM2 695 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 AIMP1Q12904 312 aaKnown RBP4.05□□□□□ -1.76
NEB-201ENST00000172853 ALS2CR12Q96Q35 445 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 EP400NLQ6ZTU2 488 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 CEP112Q8N8E3 955 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 ACTN2P35609 894 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 TOM1L2Q6ZVM7 507 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 CT47B1P0C2W7 299 aaPredicted RBP4.05□□□□□ -1.76
NEB-201ENST00000172853 FOXD4L1Q9NU39 408 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 HAUS2Q9NVX0 235 aa4.05□□□□□ -1.76
NEB-201ENST00000172853 DDX11L8A8MPP1 907 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 USP5P45974 858 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 SRCIN1Q9C0H9 1055 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 SMC3Q9UQE7 1217 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 RPGRQ92834 1020 aaKnown RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 SEC63Q9UGP8 760 aaKnown RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 ARL1P40616 181 aaPredicted RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 API5Q9BZZ5 524 aaKnown RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 ODF2LQ9ULJ1 636 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 PSMA5P28066 241 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 ZNF396Q96N95 335 aaPredicted RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 CEP57L1Q8IYX8 460 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 CTNNA2P26232 953 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 CETN1Q12798 172 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 DYDC1Q8WWB3 177 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 SSBP05455 408 aaKnown RBP eCLIP4.04□□□□□ -1.76
NEB-201ENST00000172853 SPG7Q9UQ90 795 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 LARP1Q6PKG0 1096 aaKnown RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 TTC12Q9H892 705 aaPredicted RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 FAM114A2Q9NRY5 505 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 GOLGA6L9A6NEM1 432 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 TAF4BQ92750 862 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 ZNF771Q7L3S4 317 aaPredicted RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 TNPO1Q92973 898 aaKnown RBP4.04□□□□□ -1.76
NEB-201ENST00000172853 TIGD1Q96MW7 591 aa4.04□□□□□ -1.76
NEB-201ENST00000172853 TTC16Q8NEE8 873 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 GAS8O95995 478 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 RAB34Q9BZG1 259 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 NOD1Q9Y239 953 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 CEP164Q9UPV0 1460 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 SKOR2Q2VWA4 1001 aaPredicted RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 DDX12PQ92771 950 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 SIN3AQ96ST3 1273 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 SEPT6Q14141 434 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 PRKAG2Q9UGJ0 569 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 KIF20AO95235 890 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 PPFIBP1Q86W92 1011 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 DZIP1Q86YF9 867 aaKnown RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 JMYQ8N9B5 988 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 PUS7Q96PZ0 661 aaKnown RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 BAG4O95429 457 aaKnown RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 FGFR1OPO95684 399 aaKnown RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 MAP2K1Q02750 393 aaPredicted RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 FAM13BQ9NYF5 915 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 CABP4P57796 275 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 TSG101Q99816 390 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 SMC1AQ14683 1233 aaKnown RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 TSPYL4Q9UJ04 414 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 ZNF569Q5MCW4 686 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 ANKRD45Q5TZF3 282 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 TTLL5Q6EMB2 1281 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 GCOM1H8Y6P7 765 aaPredicted RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 MYZAPP0CAP1 466 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 TMCO3Q6UWJ1 677 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 FKBP5Q13451 457 aaPredicted RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 SPOUT1Q5T280 376 aaKnown RBP4.03□□□□□ -1.76
NEB-201ENST00000172853 ESCO1Q5FWF5 840 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 OTUD6BQ8N6M0 293 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 STK25O00506 426 aa4.03□□□□□ -1.76
NEB-201ENST00000172853 GTF2F1P35269 517 aaKnown RBP eCLIP4.03□□□□□ -1.76
NEB-201ENST00000172853 RSPH3Q86UC2 560 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms