RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Kif3aP28741 701 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Btbd11Q6GQW0 1109 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Nol11Q8BJW5 723 aaKnown RBP16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 MvpQ9EQK5 861 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 PaskQ8CEE6 1383 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Hmox1P14901 289 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 GnpatP98192 678 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Aldh1l1Q8R0Y6 902 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Flad1Q8R123 492 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 AatkQ80YE4 1365 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Cdk13Q69ZA1 1511 aaKnown RBP16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Kif4P33174 1231 aa16.73■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Tmem94Q7TSH8 1360 aa16.72■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Frmpd2A0A140LI67 1392 aa16.72■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Gripap1Q8VD04 806 aa16.72■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Lrrc7Q80TE7 1490 aa16.72■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Nek4Q9Z1J2 792 aa16.72■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Ccne1Q61457 408 aa16.72■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Zmym4A2A791 1549 aaKnown RBP16.72■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Nphp4P59240 1425 aa16.71■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Sf3a1Q8K4Z5 791 aaKnown RBP16.71■□□□□ 0.27
Pcdha1-202ENSMUST00000193839 Tpm3-rs7D3Z2H9 248 aa16.71■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Cplx2P84086 134 aa16.71■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Uspl1Q3ULM6 1089 aa16.71■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Tpm3P21107 285 aaKnown RBP16.7■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 EzrP26040 586 aaKnown RBP16.7■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Pola1P33609 1465 aa16.69■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Plch2A2AP18 1501 aa16.68■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Maco1Q7TQE6 664 aaKnown RBP16.68■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Edc4Q3UJB9 1406 aaKnown RBP16.68■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Atxn3Q9CVD2 355 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Ubap1lG3UW59 384 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Eva1cP58659 440 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Hs1bp3Q3TC93 395 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 1700010I14RikQ7TPG0 532 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Kank1E9Q238 1360 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Astn2Q80Z10 1352 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Zmym3Q9JLM4 1370 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Hap1O35668 628 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Plekhm2Q80TQ5 1018 aa16.67■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 BcanQ61361 883 aa16.66■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Cchcr1Q8K2I2 770 aa16.66■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Taf3Q5HZG4 932 aa16.66■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Fez1Q8K0X8 392 aa16.66■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Rfx1P48377 963 aa16.66■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Wwc1Q5SXA9 1104 aa16.66■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Cwc27Q3TKY6 469 aa16.65■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 Ccer1Q9CQL2 403 aa16.65■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 SetQ9EQU5 289 aaKnown RBP16.65■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 PzpQ61838 1495 aa16.65■□□□□ 0.26
Pcdha1-202ENSMUST00000193839 CrcpO35427 148 aa16.64■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 OptnQ8K3K8 584 aa16.64■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Nap1l3Q794H2 544 aa16.64■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Phactr2B1AVP0 632 aa16.64■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Dnmt1P13864 1620 aaKnown RBP16.64■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Elp1Q7TT37 1333 aaKnown RBP16.64■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Srgap3Q812A2 1099 aa16.64■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 CastP51125 788 aa16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Zranb1Q7M760 708 aa16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Evc2Q8K1G2 1220 aa16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Fam50bQ9WTJ8 334 aa16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Cep170Q6A065 1588 aa16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 ScaperF8VQ70 1398 aaKnown RBP16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Hmgn5Q9JL35 406 aa16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 CrebrfQ8CDG5 640 aaKnown RBP16.63■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 AnkarA2RT91 1465 aa16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Exoc6bA6H5Z3 810 aa16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Dixdc1Q80Y83 711 aa16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 ApobrQ8VBT6 942 aa16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Srek1Q8BZX4 494 aaKnown RBP16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Kif18aQ91WD7 886 aa16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Psma5Q9Z2U1 241 aaKnown RBP16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Kdm5cP41230 1554 aa16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Znf608Q56A10 1511 aa16.62■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Dhx16G3X8X0 1044 aaKnown RBP16.61■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Rhot2Q8JZN7 620 aa16.61■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 CarsQ9ER72 831 aaKnown RBP16.61■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Dzip1Q8BMD2 852 aa16.61■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Usp54Q8BL06 1588 aaKnown RBP16.61■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Gpatch11Q3UFS4 262 aa16.6■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Tnpo1Q8BFY9 898 aaKnown RBP16.6■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Mum1Q6DID5 682 aa16.6■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Ints3Q7TPD0 1041 aaKnown RBP16.6■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Rapgef4Q9EQZ6 1011 aa16.6■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Sptbn5F6UCX4 1208 aa16.6■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Slc5a1Q8C3K6 665 aa16.6■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Trim34aQ99PP6 485 aa16.59■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Kif1bQ60575 1816 aaKnown RBP16.59■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Smc3Q9CW03 1217 aaKnown RBP16.59■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Rsph6aQ8CDR2 708 aa16.59■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Sh3bgrQ9WUZ7 214 aa16.59■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Asxl2Q8BZ32 1370 aa16.59■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Scaf1Q5U4C3 1256 aaKnown RBP16.58■□□□□ 0.25
Pcdha1-202ENSMUST00000193839 Trim34bJ3QNR8 485 aa16.58■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Noc3lQ8VI84 807 aaKnown RBP16.58■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 PtprtQ99M80 1454 aa16.58■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Tspyl2Q7TQI8 677 aa16.58■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Cog6Q8R3I3 657 aa16.58■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 Q3UPC7 1272 aa16.58■□□□□ 0.24
Pcdha1-202ENSMUST00000193839 AnlnQ8K298 1121 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms