RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Hspa4Q61316 841 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 Armc9Q9D2I5 817 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 GsdmaQ9EST1 446 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 Triml2E9PW10 424 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 SlmapQ3URD3 845 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 Sass6Q80UK7 654 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 Krt85Q9Z2T6 507 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 Smtnl1Q99LM3 459 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 SrrtQ99MR6 875 aaKnown RBP21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 Cyp46a1Q9WVK8 500 aa21.46■■□□□ 1.03
Trim71-201ENSMUST00000111816 Smarcc1P97496 1104 aa21.45■■□□□ 1.03
Trim71-201ENSMUST00000111816 Naa15Q80UM3 865 aaKnown RBP21.45■■□□□ 1.02
Trim71-201ENSMUST00000111816 Hook3Q8BUK6 718 aa21.45■■□□□ 1.02
Trim71-201ENSMUST00000111816 Ecm2Q5FW85 670 aa21.45■■□□□ 1.02
Trim71-201ENSMUST00000111816 Ccdc152E9PX14 254 aa21.45■■□□□ 1.02
Trim71-201ENSMUST00000111816 Nap1l5Q9JJF0 156 aa21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 TbcaP48428 108 aaKnown RBP21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 Gbp7Q91Z40 638 aa21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 Mis12Q9CY25 206 aa21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 Plekhh1Q80TI1 1356 aa21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 SkilQ60665 675 aa21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 Jade2Q6ZQF7 829 aa21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 Rassf4Q8CB96 322 aa21.44■■□□□ 1.02
Trim71-201ENSMUST00000111816 Vps37cQ8R105 352 aa21.43■■□□□ 1.02
Trim71-201ENSMUST00000111816 KarsQ99MN1 595 aaKnown RBP21.43■■□□□ 1.02
Trim71-201ENSMUST00000111816 Kif5bQ61768 963 aa21.43■■□□□ 1.02
Trim71-201ENSMUST00000111816 Uri1Q3TLD5 531 aa21.43■■□□□ 1.02
Trim71-201ENSMUST00000111816 Agtpbp1Q641K1 1218 aa21.43■■□□□ 1.02
Trim71-201ENSMUST00000111816 Cabp4Q8VHC5 271 aa21.43■■□□□ 1.02
Trim71-201ENSMUST00000111816 Pde1cQ64338 706 aa21.43■■□□□ 1.02
Trim71-201ENSMUST00000111816 Nol12Q8BG17 217 aa21.42■■□□□ 1.02
Trim71-201ENSMUST00000111816 Gsdma3Q5Y4Y6 464 aa21.42■■□□□ 1.02
Trim71-201ENSMUST00000111816 Baz1aO88379 1555 aa21.42■■□□□ 1.02
Trim71-201ENSMUST00000111816 Eif2aQ8BJW6 581 aaKnown RBP21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 RalylQ8BTF8 293 aa21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 Mphosph9A6H5Y1 991 aa21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 Sh2d4bA6X942 431 aa21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 Synpo2Q91YE8 1087 aaKnown RBP21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 Zfp651E9PZ11 729 aa21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 Cnnm3Q32NY4 713 aa21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 Ccdc186Q8C9S4 917 aa21.41■■□□□ 1.02
Trim71-201ENSMUST00000111816 Gm1979E9QAN3 267 aa21.4■■□□□ 1.02
Trim71-201ENSMUST00000111816 Cnksr2Q80YA9 1032 aa21.4■■□□□ 1.02
Trim71-201ENSMUST00000111816 Iqca1Q9CUL5 857 aa21.4■■□□□ 1.02
Trim71-201ENSMUST00000111816 Q9D9S1 216 aa21.4■■□□□ 1.02
Trim71-201ENSMUST00000111816 MvpQ9EQK5 861 aa21.4■■□□□ 1.02
Trim71-201ENSMUST00000111816 CactinQ9CS00 772 aaKnown RBP21.4■■□□□ 1.02
Trim71-201ENSMUST00000111816 Ccdc94Q9D6J3 314 aa21.4■■□□□ 1.02
Trim71-201ENSMUST00000111816 Zkscan2G3X952 960 aa21.39■■□□□ 1.02
Trim71-201ENSMUST00000111816 Hvcn1Q3U2S8 269 aa21.39■■□□□ 1.02
Trim71-201ENSMUST00000111816 IkQ9Z1M8 557 aaKnown RBP21.39■■□□□ 1.02
Trim71-201ENSMUST00000111816 Cep120Q7TSG1 988 aa21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 Tubb4bP68372 445 aaKnown RBP21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 Znf653Q6YND2 615 aa21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 Olr1Q9EQ09 363 aa21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 DonsonQ9QXP4 560 aa21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 Kiaa1328Q6NZK5 612 aa21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ric3Q8BPM6 367 aa21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ctage5Q8R311 779 aa21.38■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ccdc174Q3U155 467 aa21.37■■□□□ 1.01
Trim71-201ENSMUST00000111816 Naa25Q8BWZ3 972 aa21.37■■□□□ 1.01
Trim71-201ENSMUST00000111816 Iffo1Q8BXL9 562 aa21.37■■□□□ 1.01
Trim71-201ENSMUST00000111816 Rnf34Q99KR6 376 aa21.37■■□□□ 1.01
Trim71-201ENSMUST00000111816 Apol7aB2RT54 418 aa21.37■■□□□ 1.01
Trim71-201ENSMUST00000111816 Eva1cP58659 440 aa21.37■■□□□ 1.01
Trim71-201ENSMUST00000111816 Akap8Q9DBR0 687 aaKnown RBP21.37■■□□□ 1.01
Trim71-201ENSMUST00000111816 Nup155Q99P88 1391 aaKnown RBP21.36■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ccdc171E9Q1U1 1324 aa21.36■■□□□ 1.01
Trim71-201ENSMUST00000111816 Smco2Q9DA21 347 aa21.36■■□□□ 1.01
Trim71-201ENSMUST00000111816 Vps41Q5KU39 853 aa21.36■■□□□ 1.01
Trim71-201ENSMUST00000111816 Zeb2Q9R0G7 1215 aa21.36■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ercc3P49135 783 aa21.36■■□□□ 1.01
Trim71-201ENSMUST00000111816 Gm21671G3UY31 267 aa21.36■■□□□ 1.01
Trim71-201ENSMUST00000111816 RpgrQ9R0X5 1001 aa21.35■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ccdc93Q7TQK5 629 aa21.35■■□□□ 1.01
Trim71-201ENSMUST00000111816 Gnai1B2RSH2 354 aa21.35■■□□□ 1.01
Trim71-201ENSMUST00000111816 Gnai3Q9DC51 354 aa21.35■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ccdc6D3YZP9 469 aa21.35■■□□□ 1.01
Trim71-201ENSMUST00000111816 Stmn4P63042 189 aa21.35■■□□□ 1.01
Trim71-201ENSMUST00000111816 Zfp42P22227 288 aa21.35■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ncbp1Q3UYV9 790 aaKnown RBP21.34■■□□□ 1.01
Trim71-201ENSMUST00000111816 Cep57l1Q8VDS7 400 aa21.34■■□□□ 1.01
Trim71-201ENSMUST00000111816 Nek4Q9Z1J2 792 aa21.34■■□□□ 1.01
Trim71-201ENSMUST00000111816 Cacna2d3Q9Z1L5 1091 aa21.34■■□□□ 1.01
Trim71-201ENSMUST00000111816 Itgb1bp2Q9R000 350 aa21.34■■□□□ 1.01
Trim71-201ENSMUST00000111816 Camk4P08414 469 aa21.34■■□□□ 1.01
Trim71-201ENSMUST00000111816 Abcf1Q6P542 837 aaKnown RBP21.34■■□□□ 1.01
Trim71-201ENSMUST00000111816 Abl1P00520 1123 aa21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Wasf1Q8R5H6 559 aa21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 HypkQ9CR41 129 aa21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Lemd3Q9WU40 921 aa21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Wdr33Q8K4P0 1330 aaKnown RBP21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Ppp2r3aB2RXC8 1150 aa21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Sv2bQ8BG39 683 aa21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Myh10Q61879 1976 aaKnown RBP21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Rnf168Q80XJ2 565 aa21.33■■□□□ 1.01
Trim71-201ENSMUST00000111816 Cetn1P41209 172 aa21.33■■□□□ 1
Trim71-201ENSMUST00000111816 Ripply1Q2WG77 201 aa21.33■■□□□ 1
Trim71-201ENSMUST00000111816 Mctp1E9PV86 951 aa21.33■■□□□ 1
Trim71-201ENSMUST00000111816 Basp1Q91XV3 226 aa21.33■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 125.9 ms