RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Gm43302L7N1X8 611 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Luc7l3Q5SUF2 432 aaKnown RBP7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ppfia3P60469 1194 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Akap8Q9DBR0 687 aaKnown RBP7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Gm21671G3UY31 267 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ksr2Q3UVC0 959 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ccdc93Q7TQK5 629 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Soga3Q6NZL0 945 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Calml4Q91WQ9 153 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Krt7Q9DCV7 457 aa7.12□□□□□ -1.27
Vcan-203ENSMUST00000109546 Lrrc23O35125 340 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Dync1i1O88485 628 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Prkrip1Q9CWV6 186 aaKnown RBP7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cfap100Q80VN0 613 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Taok3Q8BYC6 898 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Plekhh1Q80TI1 1356 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Heatr4E9Q357 955 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cep63Q3UPP8 700 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ankrd1Q9CR42 319 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Nap1l5Q9JJF0 156 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ccdc18Q640L5 1455 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Fam114a2Q8VE88 497 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Golga1Q9CW79 758 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cyp26c1B2RXA7 518 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Hvcn1Q3U2S8 269 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Paxip1Q6NZQ4 1056 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Grwd1Q810D6 446 aaKnown RBP7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Enox2Q8R0Z2 598 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Satb2Q8VI24 733 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Filip1Q9CS72 1211 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Opa1P58281 960 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ccdc94Q9D6J3 314 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Taf7Q9R1C0 341 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Mad1l1Q9WTX8 717 aaKnown RBP7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Trerf1Q8BXJ2 1205 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Gramd4Q8CB44 633 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 Tmco5aQ9D9D5 303 aa7.11□□□□□ -1.27
Vcan-203ENSMUST00000109546 RalylQ8BTF8 293 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Krt85Q9Z2T6 507 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Rb1cc1Q9ESK9 1588 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ercc3P49135 783 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Smc6Q924W5 1097 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Erich4Q3UNU4 136 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Stk38Q91VJ4 465 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Dpf1Q9QX66 387 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Elp1Q7TT37 1333 aaKnown RBP7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Me1P06801 572 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Naa25Q8BWZ3 972 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ncbp3Q8BZR9 615 aaKnown RBP7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Arfgap2Q99K28 520 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Apol7bB1AQP7 369 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Gm1979E9QAN3 267 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Mtus1Q5HZI1 1210 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 CrcpO35427 148 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cep83Q9D5R3 692 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Rfwd2Q9R1A8 733 aaKnown RBP7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 EsrrbQ61539 433 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Wdr33Q8K4P0 1330 aaKnown RBP7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Samd1D3YXK1 519 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Tuft1O08970 390 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Gle1Q8R322 699 aa7.1□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ccdc170D3YXL0 722 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Trim17Q7TPM3 477 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cep128Q8BI22 1102 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Rasal2E9PW37 1286 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Stmn2P55821 179 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Gnl2Q99LH1 728 aaKnown RBP7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 ClgnP52194 611 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Znf710Q3U288 666 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cavin2Q63918 418 aaKnown RBP7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Nol7Q9D7Z3 254 aaKnown RBP7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 DonsonQ9QXP4 560 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cbx1P83917 185 aaKnown RBP7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Uri1Q3TLD5 531 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Nol12Q8BG17 217 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 SncbQ91ZZ3 133 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Brms1Q99N20 246 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Ccdc183A2AJB1 534 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Cetn1P41209 172 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Stim2P83093 746 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Hsf2bpQ9D4G2 338 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Arhgap35Q91YM2 1499 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Sf3b2Q3UJB0 878 aaKnown RBP7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Phactr2B1AVP0 632 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Trpc3Q9QZC1 836 aa7.09□□□□□ -1.27
Vcan-203ENSMUST00000109546 Nucb2P81117 420 aa7.09□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc38Q8CDN8 563 aa7.09□□□□□ -1.28
Vcan-203ENSMUST00000109546 Spats2Q8K1N4 545 aaKnown RBP7.09□□□□□ -1.28
Vcan-203ENSMUST00000109546 Sem1P60897 70 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Eif2s2Q99L45 331 aaKnown RBP7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 SkiQ60698 725 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Tex2Q6ZPJ0 1128 aaKnown RBP7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Sept8Q8CHH9 429 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Wasf1Q8R5H6 559 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Olfml1Q8BSH2 233 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ttc12Q8BW49 704 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 SkilQ60665 675 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Q8R1Y2 203 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Ccdc91Q9D8L5 442 aa7.08□□□□□ -1.28
Vcan-203ENSMUST00000109546 Gtpbp10Q8K013 366 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms