RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 NACC2Q96BF6 587 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 LENG1Q96BZ8 264 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 CDH19Q9H159 772 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 PLGRKTQ9HBL7 147 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SCN11AQ9UI33 1791 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 BCL9LQ86UU0 1499 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 LINC00854A0A1B0GVQ3 168 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 C1QTNF3-AMACRE9PGA6 284 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SNX3O60493 162 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 FGFR3P22607 806 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 GRIA3P42263 894 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MARSP56192 900 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 RAB25P57735 213 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 BNC1Q01954 994 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SFRP1Q8N474 314 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 TEFMQ96QE5 360 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 CEP41Q9BYV8 373 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MYPNQ86TC9 1320 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MAFO75444 373 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 KHDRBS3O75525 346 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 ENDOD1O94919 500 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 DRD4P21917 467 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 KLHL24Q6TFL4 600 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 USP50Q70EL3 339 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.6□□□□□ -1.67
CHD9-221ENST00000615216 OFCC1Q8IZS5 231 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 TSEN2Q8NCE0 465 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 PIK3C3Q8NEB9 887 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 EEF1AKMT1Q8WVE0 214 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 ATXN3LQ9H3M9 355 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 SEMA4BQ9NPR2 832 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 CHST7Q9NS84 486 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 INTS7Q9NVH2 962 aaKnown RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 COMMD9Q9P000 198 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 CORO1CQ9ULV4 474 aaPredicted RBP4.6□□□□□ -1.67
CHD9-221ENST00000615216 COQ6Q9Y2Z9 468 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 MYH7BA7E2Y1 1941 aa4.6□□□□□ -1.67
CHD9-221ENST00000615216 DHRS12A0PJE2 317 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 SAGE2PA6NJ88 616 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 SMIM10L2AP0DMW4 78 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 SMIM10L2BP0DMW5 78 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 UMPSP11172 480 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 CRHR1P34998 444 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 RPL5P46777 297 aaKnown RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 CLK2P49760 499 aaKnown RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 CASP7P55210 303 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 NR1D2Q14995 579 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 QPRTQ15274 297 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 RFTN2Q52LD8 501 aaPredicted RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 C9orf131Q5VYM1 1079 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 DUPD1Q68J44 220 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 LIN54Q6MZP7 749 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 TRAPPC5Q8IUR0 188 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 RBFAQ8N0V3 343 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 PDPRQ8NCN5 879 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 DNAJC1Q96KC8 554 aaKnown RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 RNF157Q96PX1 679 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 HOPXQ9BPY8 73 aaPredicted RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 MLPHQ9BV36 600 aaPredicted RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 TDRD1Q9BXT4 1180 aaKnown RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 COG5Q9UP83 839 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 TSPAN3O60637 253 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 AVILO75366 819 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 ULK1O75385 1050 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 MTRF1O75570 445 aaKnown RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 ITGA2BP08514 1039 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 PRG2P13727 222 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 NFKB1P19838 968 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 GPD2P43304 727 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 MAPK11Q15759 364 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 MAPKAPK3Q16644 382 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 TMEM63BQ5T3F8 832 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 PHC3Q8NDX5 983 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 ASAH2Q9NR71 780 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 ETAA1Q9NY74 926 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 KLQ9UEF7 1012 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 EFR3BQ9Y2G0 817 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 PCDHGB3Q9Y5G1 929 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 MRC1P22897 1456 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 LOC100506127A0A0U1RQW1 187 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 GSAPA4D1B5 854 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 PTGES3LE9PB15 166 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 EML1O00423 815 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 AREL1O15033 823 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 MATKP42679 507 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 BIKQ13323 160 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 ZSWIM7Q19AV6 140 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 WDR59Q6PJI9 974 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 CES3Q6UWW8 571 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 DNAJC14Q6Y2X3 702 aaPredicted RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 HEATR4Q86WZ0 1026 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 TBC1D21Q8IYX1 336 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 CHPFQ8IZ52 775 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 LRRC52Q8N7C0 313 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 OR4A15Q8NGL6 344 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 REXO5Q96IC2 774 aaKnown RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 DCUN1D5Q9BTE7 237 aa4.59□□□□□ -1.67
CHD9-221ENST00000615216 MRPL17Q9NRX2 175 aaKnown RBP4.59□□□□□ -1.67
CHD9-221ENST00000615216 MRTO4Q9UKD2 239 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms