RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 KIAA1328Q86T90 577 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GSPT2Q8IYD1 628 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 IL17RCQ8NAC3 791 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 BAHD1Q8TBE0 780 aaPredicted RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 USP7Q93009 1102 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 CLIP3Q96DZ5 547 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 HEMGNQ9BXL5 484 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 MKRN2Q9H000 416 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 LUC7LQ9NQ29 371 aaKnown RBP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.06□□□□□ -1.6
SYCP1-209ENST00000613524 TBC1D14Q9P2M4 693 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 OR12D3Q9UGF7 316 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 RAB23Q9ULC3 237 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 CA5BQ9Y2D0 317 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 PTPRDP23468 1912 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 GREB1Q4ZG55 1949 aa5.06□□□□□ -1.6
SYCP1-209ENST00000613524 E2F8A0AVK6 867 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SHISA7A6NL88 538 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 KCNU1A8MYU2 1149 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 EIF3CLB5ME19 914 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ARNTLO00327 626 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 AP1G1O43747 822 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TCEA3O75764 348 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 RNASEH2AO75792 299 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 NEBLO76041 1014 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 RNF8O76064 485 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 FBXO21O94952 628 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ACADMP11310 421 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 NME2P22392 152 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MMP8P22894 467 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 DDX6P26196 483 aaKnown RBP eCLIP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 HOXD9P28356 352 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MATKP42679 507 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 RNF144AP50876 292 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CORO7P57737 925 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 IL9RQ01113 521 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 KRT81Q14533 505 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ZNF234Q14588 700 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 STARD3Q14849 445 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ATXN7L2Q5T6C5 722 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 NUGGCQ68CJ6 796 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ZNF572Q7Z3I7 529 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TMEM110Q86TL2 294 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 NLRP8Q86W28 1048 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 RALGPS2Q86X27 583 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TMPRSS6Q8IU80 811 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MCOLN2Q8IZK6 566 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ATP6V0D2Q8N8Y2 350 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TMEM145Q8NBT3 493 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 AENQ8WTP8 325 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CTNNBL1Q8WYA6 563 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 RNF31Q96EP0 1072 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CAPZA3Q96KX2 299 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 EIF3CQ99613 913 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TM9SF2Q99805 663 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SARGQ9BW04 601 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 GPR174Q9BXC1 333 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ARRDC1-AS1Q9H2J1 176 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 NHEJ1Q9H9Q4 299 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ATP13A1Q9HD20 1204 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 RXFP3Q9NSD7 469 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SAE1Q9UBE0 346 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PHTF1Q9UMS5 762 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 HEY1Q9Y5J3 304 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 THADAQ6YHU6 1953 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PIEZO2Q9H5I5 2752 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TCRBV16S1A1N1A0A5B0 115 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CFAP69A5D8W1 941 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PLD2O14939 933 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SMAD6O43541 496 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SPOPO43791 374 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PRPSAP2O60256 369 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 IPO7O95373 1038 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CD48P09326 243 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ZDHHC11BP0C7U3 371 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CCDC172P0C7W6 258 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ESRRAP11474 423 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 GOT1P17174 413 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ITIH2P19823 946 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MAGEA9P43362 315 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MAXP61244 160 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ZBED6P86452 979 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CYP4F3Q08477 520 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 MTM1Q13496 603 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 GFOD2Q3B7J2 385 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 HSP90B2PQ58FF3 399 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 TMEM196Q5HYL7 178 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 PM20D1Q6GTS8 502 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ACAD10Q6JQN1 1059 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 KBTBD6Q86V97 674 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CREG2Q8IUH2 290 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 UNC45BQ8IWX7 931 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 CCNYQ8ND76 341 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 NKD2Q969F2 451 aaPredicted RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 GDAP1L1Q96MZ0 367 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 AARSD1Q9BTE6 412 aaKnown RBP5.05□□□□□ -1.6
SYCP1-209ENST00000613524 ZDHHC6Q9H6R6 413 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 EMC7Q9NPA0 242 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 FZD3Q9NPG1 666 aa5.05□□□□□ -1.6
SYCP1-209ENST00000613524 SLC2A4RGQ9NR83 387 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms