RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 MMP20O60882 483 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 CSF2P04141 144 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 NME1P15531 152 aaKnown RBP18.38■□□□□ 0.53
VCX3A-203ENST00000612369 AMPD1P23109 780 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 ACP1P24666 158 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 HSPA9P38646 679 aaKnown RBP18.38■□□□□ 0.53
VCX3A-203ENST00000612369 POLR2LP62875 67 aaKnown RBP18.38■□□□□ 0.53
VCX3A-203ENST00000612369 DNAJC3Q13217 504 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 PTK2BQ14289 1009 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 SLC18A3Q16572 532 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 PROX2Q3B8N5 592 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 CCDC157Q569K6 752 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 DHRS13Q6UX07 377 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 ARHGAP36Q6ZRI8 547 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 ZNF564Q8TBZ8 553 aaPredicted RBP18.38■□□□□ 0.53
VCX3A-203ENST00000612369 BTBD6Q96KE9 485 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 DNAJC7Q99615 494 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 TSPY26PQ9H489 355 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 PCDH18Q9HCL0 1135 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 ZNHIT6Q9NWK9 470 aaKnown RBP18.38■□□□□ 0.53
VCX3A-203ENST00000612369 DNAJC28Q9NX36 388 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 UVRAGQ9P2Y5 699 aa18.38■□□□□ 0.53
VCX3A-203ENST00000612369 SSU72P8A0A1W2PR75 194 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 CFAP69A5D8W1 941 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 RIOK3O14730 519 aaKnown RBP18.37■□□□□ 0.53
VCX3A-203ENST00000612369 SIGLEC6O43699 453 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 KRT37O76014 449 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 CAPNS1P04632 268 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 TPM1P09493 284 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 H2AFZP0C0S5 128 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 EIF4A3P38919 411 aaKnown RBP18.37■□□□□ 0.53
VCX3A-203ENST00000612369 RGRP47804 291 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 THOP1P52888 689 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 AP1S1P61966 158 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 BCL2L1Q07817 233 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 PDE1CQ14123 709 aaPredicted RBP18.37■□□□□ 0.53
VCX3A-203ENST00000612369 LBRQ14739 615 aaKnown RBP18.37■□□□□ 0.53
VCX3A-203ENST00000612369 AGERQ15109 404 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 TSR1Q2NL82 804 aaKnown RBP18.37■□□□□ 0.53
VCX3A-203ENST00000612369 LRRC73Q5JTD7 316 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 TXNRD3NBQ6F5E7 133 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 H2AFVQ71UI9 128 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 CAMK1DQ8IU85 385 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 LRRC49Q8IUZ0 686 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 BBS5Q8N3I7 341 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 FAM71BQ8TC56 605 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 BTN2A2Q8WVV5 523 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 CTNNBL1Q8WYA6 563 aaPredicted RBP18.37■□□□□ 0.53
VCX3A-203ENST00000612369 ECHDC3Q96DC8 303 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 DUSP23Q9BVJ7 150 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 NLGN3Q9NZ94 848 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 CSNK1G3Q9Y6M4 447 aa18.37■□□□□ 0.53
VCX3A-203ENST00000612369 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.36■□□□□ 0.53
VCX3A-203ENST00000612369 A0A1W2PQ67 120 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 TRIM38O00635 465 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 SCAMP1O15126 338 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 ITIH2P19823 946 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 HNF1BP35680 557 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 SLC10A7Q0GE19 358 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 KRT81Q14533 505 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 VSTM4Q8IW00 320 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 TP53I13Q8NBR0 393 aaPredicted RBP18.36■□□□□ 0.53
VCX3A-203ENST00000612369 NSMCE1Q8WV22 266 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 WRAP53Q9BUR4 548 aaKnown RBP18.36■□□□□ 0.53
VCX3A-203ENST00000612369 DEF6Q9H4E7 631 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 CCDC86Q9H6F5 360 aaKnown RBP18.36■□□□□ 0.53
VCX3A-203ENST00000612369 USP29Q9HBJ7 922 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 PCDH12Q9NPG4 1184 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 ETNK2Q9NVF9 386 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 EVA1BQ9NVM1 165 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 UCKL1Q9NWZ5 548 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 CTTNBP2NLQ9P2B4 639 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 ATP8A1Q9Y2Q0 1164 aa18.36■□□□□ 0.53
VCX3A-203ENST00000612369 MAFKO60675 156 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 PROSCO94903 275 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 GIMD1P0DJR0 217 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 IGFALSP35858 605 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 MMP12P39900 470 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 SSR1P43307 286 aaKnown RBP18.35■□□□□ 0.53
VCX3A-203ENST00000612369 PEX5P50542 639 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 SCNN1BP51168 640 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 CDH6P55285 790 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 DAB2P98082 770 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 E2F1Q01094 437 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 ZNF235Q14590 738 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 LRRC14Q15048 493 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 ASTE1Q2TB18 679 aaPredicted RBP18.35■□□□□ 0.53
VCX3A-203ENST00000612369 ZNF542PQ5EBM4 170 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 RALGPS1Q5JS13 557 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 PROSER1Q86XN7 944 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 TP53INP2Q8IXH6 220 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 CACTIN-AS1Q8N1I8 211 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 ATPAF2Q8N5M1 289 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 FAM181AQ8N9Y4 354 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 SPOCK2Q92563 424 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 TBATAQ96M53 351 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 DKK4Q9UBT3 224 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 WDFY3Q8IZQ1 3526 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 KNTC1P50748 2209 aa18.35■□□□□ 0.53
VCX3A-203ENST00000612369 TDRD6O60522 2096 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms