RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 GON4LQ3T8J9 2241 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 RALGAPA1Q6GYQ0 2036 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 NUP205Q92621 2012 aa17.45■□□□□ 0.38
SHKBP1-212ENST00000596163 GRID2IPA4D2P6 1211 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 MIF4GDA9UHW6 222 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 UPK3BL1B0FP48 263 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 UPK3BL2E5RIL1 263 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 AREL1O15033 823 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 SLC31A1O15431 190 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 DFNA5O60443 496 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 CST8O60676 142 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 CCDC175P0C221 793 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 CR2P20023 1033 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 HNRNPA2B1P22626 353 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 AP1B1Q10567 949 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 SLC14A1Q13336 389 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 UAP1L1Q3KQV9 507 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 TMEM259Q4ZIN3 620 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 LRRC57Q8N9N7 239 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 KRT35Q92764 455 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 P3H4Q92791 437 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 C1QTNF7Q9BXJ2 289 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 FSCN3Q9NQT6 498 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 ZFR2Q9UPR6 939 aaKnown RBP17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 EFR3BQ9Y2G0 817 aa17.44■□□□□ 0.38
SHKBP1-212ENST00000596163 WDR87Q6ZQQ6 2873 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 hCG_1818297A0A087WSY0 165 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 KRT10P13645 584 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 CA4P22748 312 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 NUMA1Q14980 2115 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 KIF19Q2TAC6 998 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 TMEM52BQ4KMG9 183 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 CCDC181Q5TID7 509 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 SEL1L3Q68CR1 1132 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 NT5DC3Q86UY8 548 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 NDUFAF2Q8N183 169 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 PGBD5Q8N414 524 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 KLK6Q92876 244 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 ECHDC3Q96DC8 303 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 LGMNQ99538 433 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 SEMA3CQ99985 751 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 C1QTNF2Q9BXJ5 285 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 GAREM1Q9H706 876 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 DNAAF2Q9NVR5 837 aaKnown RBP17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 HS3ST3A1Q9Y663 406 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 SLCO1B1Q9Y6L6 691 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 CEP192Q8TEP8 1941 aa17.43■□□□□ 0.38
SHKBP1-212ENST00000596163 FRYLO94915 3013 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 TNRC6BQ9UPQ9 1833 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 NYNRINQ9P2P1 1898 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 A0A1W2PR77 199 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 CFAP69A5D8W1 941 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 IGLON5A6NGN9 336 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 TLR4O00206 839 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 TRAFD1O14545 582 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 RIOK3O14730 519 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 TM7SF2O76062 418 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 PAK4O96013 591 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 JCHAINP01591 159 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 PRLRP16471 622 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 MARCKSL1P49006 195 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 PEX5P50542 639 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 MAXP61244 160 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 IFI35P80217 286 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 SUZ12Q15022 739 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 HLA-BQ31612 363 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 NPNTQ6UXI9 565 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 SPOCK2Q92563 424 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 KLHDC7BQ96G42 594 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 OLFM3Q96PB7 478 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 LENG8Q96PV6 779 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 TRIM10Q9UDY6 481 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 GUCA1BQ9UMX6 200 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 ATP8A1Q9Y2Q0 1164 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 PCDHGC4Q9Y5F7 938 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 SNX11Q9Y5W9 270 aa17.42■□□□□ 0.38
SHKBP1-212ENST00000596163 MTSS1O43312 755 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 HTRA2O43464 458 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 ZNF883P0CG24 379 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 PTPN7P35236 360 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 CTSKP43235 329 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 FAM193AP78312 1265 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 BNC1Q01954 994 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 ARMC12Q5T9G4 340 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 ALG1LQ6GMV1 187 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 ZNF662Q6ZS27 426 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 BBS12Q6ZW61 710 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 DGLUCYQ7Z3D6 616 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 DCP2Q8IU60 420 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 OXR1Q8N573 874 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 TMEM145Q8NBT3 493 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 DENND6BQ8NEG7 585 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 PDCD6IPQ8WUM4 868 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 TFB1MQ8WVM0 346 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 IL12RB2Q99665 862 aa17.41■□□□□ 0.38
SHKBP1-212ENST00000596163 FERMT1Q9BQL6 677 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms