RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 UCNP55089 124 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 TBX2Q13207 712 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 SLC18A3Q16572 532 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 ISXQ2M1V0 245 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 PCSK4Q6UW60 755 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 DNAAF5Q86Y56 855 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 OR2AP1Q8NGE2 309 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 BTN2A2Q8WVV5 523 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 ARHGEF2Q92974 986 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 ARHGEF26Q96DR7 871 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 TBATAQ96M53 351 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 OSBPL1AQ9BXW6 950 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 ASCL3Q9NQ33 180 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 NDFIP2Q9NV92 336 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 TMEM248Q9NWD8 314 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 IPO11Q9UI26 975 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 EME2A4GXA9 379 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 EIF3CLB5ME19 914 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 ERVH48-1M5A8F1 160 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 JUNDP17535 347 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 TMPRSS3P57727 454 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 EIF2B5Q13144 721 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 POLD3Q15054 466 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 RAB6CQ53S08 254 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 TPRG1LQ5T0D9 272 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 BROXQ5VW32 411 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 RWDD4Q6NW29 188 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 GAS2L3Q86XJ1 694 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 CCDC185Q8N715 623 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 TPCN2Q8NHX9 752 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 CENPTQ96BT3 561 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 TBC1D31Q96DN5 1066 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 EIF3CQ99613 913 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 THAP2Q9H0W7 228 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 MAGEH1Q9H213 219 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 THSD1Q9NS62 852 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 FZD10Q9ULW2 581 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 HPCAL4Q9UM19 191 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 NEU3Q9UQ49 428 aa17.77■□□□□ 0.44
SHKBP1-203ENST00000594298 NEMP1O14524 444 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 AREL1O15033 823 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 POP4O95707 220 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 CYP1A2P05177 515 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 H2AFZP0C0S5 128 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 TGM2P21980 687 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 GKP32189 559 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 SNRPD1P62314 119 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 OGDHQ02218 1023 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 PTK2BQ14289 1009 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 PIGHQ14442 188 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 NR0B2Q15466 257 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 CDKN3Q16667 212 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 GUSBP11Q6P575 273 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 H2AFVQ71UI9 128 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 ZNF843Q8N446 348 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 OR6K2Q8NGY2 324 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 LMX1AQ8TE12 382 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 CTNNBL1Q8WYA6 563 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 WBP1Q96G27 269 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 NAF1Q96HR8 494 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 EPAS1Q99814 870 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 BOCQ9BWV1 1114 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 DPH1Q9BZG8 443 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 NHEJ1Q9H9Q4 299 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 DONSONQ9NYP3 566 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 SPASTQ9UBP0 616 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 IP6K2Q9UHH9 426 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 LCMT1Q9UIC8 334 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 GGT7Q9UJ14 662 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 ITM2BQ9Y287 266 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 SSUH2Q9Y2M2 353 aa17.76■□□□□ 0.43
SHKBP1-203ENST00000594298 BPTFQ12830 3046 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 PTPRQQ9UMZ3 2332 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 CAPN8A6NHC0 703 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 KRIT1O00522 736 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 TOR1BO14657 336 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 PRPSAP2O60256 369 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 RAMP2O60895 175 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 TCEA3O75764 348 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 LRIG2O94898 1065 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 HTR7P34969 479 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 YPEL5P62699 121 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 RHDQ02161 417 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 ASTE1Q2TB18 679 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 DEFB133Q30KQ1 61 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 MYLK3Q32MK0 819 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 EFL1Q7Z2Z2 1120 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 PSTKQ8IV42 348 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 RYBPQ8N488 228 aaPredicted RBP17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 SNRNP27Q8WVK2 155 aaKnown RBP17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 KCNE4Q8WWG9 221 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 IL12RB2Q99665 862 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 NUP85Q9BW27 656 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 DNAI1Q9UI46 699 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 PCDHGA8Q9Y5G5 932 aa17.75■□□□□ 0.43
SHKBP1-203ENST00000594298 CPED1A4D0V7 1026 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 ZSCAN5CA6NGD5 496 aaPredicted RBP17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 FAM72CH0Y354 149 aa17.74■□□□□ 0.43
SHKBP1-203ENST00000594298 MYO1FO00160 1098 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms