RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 A0A1W2PQU0 124 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 C1QTNF3-AMACRE9PGA6 284 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 ALOX15BO15296 676 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 MSNP26038 577 aaKnown RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 EPHA8P29322 1005 aaPredicted RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 GKP32189 559 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 PEX5P50542 639 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 CLDN2P57739 230 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 SERINC3Q13530 473 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 TFDP2Q14188 446 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 PAFAH1B3Q15102 231 aaKnown RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 PPP2R5EQ16537 467 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 TFDP3Q5H9I0 405 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 SEL1L3Q68CR1 1132 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 C22orf39Q6P5X5 142 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 KDM7AQ6ZMT4 941 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 DSG4Q86SJ6 1040 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 TRIM69Q86WT6 500 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 REXO1L1PQ8IX06 675 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 MFSD2AQ8NA29 543 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 NETO2Q8NC67 525 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 PCDH19Q8TAB3 1148 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 CASKIN2Q8WXE0 1202 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 VOPP1Q96AW1 172 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 HES6Q96HZ4 224 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 CNDP2Q96KP4 475 aaKnown RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 KLC2Q9H0B6 622 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 ZFR2Q9UPR6 939 aaKnown RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 FCF1Q9Y324 198 aaKnown RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 WASF2Q9Y6W5 498 aa15.88■□□□□ 0.13
USB1-208ENST00000563207 TDRD6O60522 2096 aaKnown RBP15.88■□□□□ 0.13
USB1-208ENST00000563207 TRABD2BA6NFA1 517 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 ENC1O14682 589 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 SLC7A4O43246 635 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 LEFTY1O75610 366 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 LDOC1O95751 146 aaPredicted RBP15.87■□□□□ 0.13
USB1-208ENST00000563207 CDKN2BP42772 138 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 ZNF284Q2VY69 593 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 INO80DQ53TQ3 878 aaPredicted RBP15.87■□□□□ 0.13
USB1-208ENST00000563207 SLC9A4Q6AI14 798 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 MFSD7Q6UXD7 560 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 BZW1Q7L1Q6 419 aaKnown RBP15.87■□□□□ 0.13
USB1-208ENST00000563207 ARHGAP12Q8IWW6 846 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 KRT35Q92764 455 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 RNF25Q96BH1 459 aaPredicted RBP15.87■□□□□ 0.13
USB1-208ENST00000563207 CEP44Q9C0F1 390 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 SLC39A8Q9C0K1 460 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 KDM4CQ9H3R0 1056 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 CCDC86Q9H6F5 360 aaKnown RBP15.87■□□□□ 0.13
USB1-208ENST00000563207 KLHL11Q9NVR0 708 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 RAXQ9Y2V3 346 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 MYLKQ15746 1914 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 LOC400499M0QZD8 3231 aa15.87■□□□□ 0.13
USB1-208ENST00000563207 ARID1BQ8NFD5 2236 aaPredicted RBP15.86■□□□□ 0.13
USB1-208ENST00000563207 DFNA5O60443 496 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 FTCDO95954 541 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 MYF5P13349 255 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 MX2P20592 715 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 PTPN7P35236 360 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 NR2C2P49116 596 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 PAPOLAP51003 745 aaKnown RBP15.86■□□□□ 0.13
USB1-208ENST00000563207 DNA2P51530 1060 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 CYP4F3Q08477 520 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 FGL2Q14314 439 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 STAT4Q14765 748 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 SMAD1Q15797 465 aaKnown RBP15.86■□□□□ 0.13
USB1-208ENST00000563207 TMCO4Q5TGY1 634 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 MEI1Q5TIA1 1274 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 NCBP2-AS2Q69YL0 99 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 SPOCD1Q6ZMY3 1216 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 ZNF354CQ86Y25 554 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 CCDC50Q8IVM0 306 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 SLC25A45Q8N413 288 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 NPWQ8N729 165 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 PQLC3Q8N755 202 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 TMEM145Q8NBT3 493 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 TMIEQ8NEW7 156 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 OR6K2Q8NGY2 324 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 ISG20Q96AZ6 181 aaKnown RBP15.86■□□□□ 0.13
USB1-208ENST00000563207 HMCESQ96FZ2 354 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 KCND1Q9NSA2 647 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 ETNK2Q9NVF9 386 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 UCKL1Q9NWZ5 548 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 IL36AQ9UHA7 158 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 ZFYVE26Q68DK2 2539 aa15.86■□□□□ 0.13
USB1-208ENST00000563207 GOLGA4Q13439 2230 aaKnown RBP15.85■□□□□ 0.13
USB1-208ENST00000563207 TRIM38O00635 465 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 APOL1O14791 398 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 RAD51BO15315 384 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 RXRGP48443 463 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 MARCKSL1P49006 195 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 ACADVLP49748 655 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 SERPINH1P50454 418 aaKnown RBP15.85■□□□□ 0.13
USB1-208ENST00000563207 IL10RBQ08334 325 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 RFTN1Q14699 578 aaPredicted RBP15.85■□□□□ 0.13
USB1-208ENST00000563207 SETMARQ53H47 684 aaPredicted RBP15.85■□□□□ 0.13
USB1-208ENST00000563207 ZNF542PQ5EBM4 170 aa15.85■□□□□ 0.13
USB1-208ENST00000563207 ERN2Q76MJ5 926 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms