RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 CYP2U1Q7Z449 544 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 ADAT2Q7Z6V5 191 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 SYT12Q8IV01 421 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 RGL4Q8IZJ4 473 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 C1orf216Q8TAB5 229 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 SPOCK2Q92563 424 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 USP29Q9HBJ7 922 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 KCND1Q9NSA2 647 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 HAUS2Q9NVX0 235 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 EIF2B4Q9UI10 523 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 GGT7Q9UJ14 662 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 ZFR2Q9UPR6 939 aaKnown RBP12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 RAI2Q9Y5P3 530 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 SLCO1B1Q9Y6L6 691 aa12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 EP300Q09472 2414 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-218ENST00000560777 RIF1Q5UIP0 2472 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 A0A1W2PPC4 97 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 MEI4A8MW99 385 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 UPK3BL1B0FP48 263 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 UPK3BL2E5RIL1 263 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 TSPAN6O43657 245 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 FZD6O60353 706 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PCDH8O95206 1070 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 ATP1A1P05023 1023 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PRKCGP05129 697 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PDHA1P08559 390 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 CD27P26842 260 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 MAT2AP31153 395 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 CD86P42081 329 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SUOXP51687 545 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 POLR2LP62875 67 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SKOR1P84550 965 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SPEM2Q0P670 501 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SIX1Q15475 284 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 ZNF284Q2VY69 593 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 CFAP58Q5T655 872 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 DARS2Q6PI48 645 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PID1Q7Z2X4 250 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 ALYREFQ86V81 257 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 TRIM69Q86WT6 500 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 HORMAD1Q86X24 394 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 ZNF567Q8N184 647 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SLC35B2Q8TB61 432 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PDCD6IPQ8WUM4 868 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PIH1D2Q8WWB5 315 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SNX19Q92543 992 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 TADA1Q96BN2 335 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 IMP4Q96G21 291 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 FEM1CQ96JP0 617 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 VAT1Q99536 393 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 MIR1-1HGQ9H1L0 117 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SLC25A51Q9H1U9 297 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 SMOC1Q9H4F8 434 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 GLOD4Q9HC38 313 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PARD6AQ9NPB6 346 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 PCDH12Q9NPG4 1184 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 ATXN2Q99700 1313 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 TNRC6BQ9UPQ9 1833 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-218ENST00000560777 ANKRD36A6QL64 1941 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 DOCK9Q9BZ29 2069 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 A0A1W2PQ67 120 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 NEMP1O14524 444 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 WNT9AO14904 365 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 CEP104O60308 925 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 LRP3O75074 770 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 PGLSO95336 258 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 PRLP01236 227 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 FGGP02679 453 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 SERPINF2P08697 491 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 ZNF806P0C7X5 589 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 XPAP23025 273 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 MSNP26038 577 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 HOXD12P35452 270 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 GNG11P61952 73 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 RPS21P63220 83 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 SEMG2Q02383 582 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 TMEM52BQ4KMG9 183 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 ARMC12Q5T9G4 340 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 SEL1L3Q68CR1 1132 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 CDKL3Q8IVW4 592 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 C17orf53Q8N3J3 647 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 SPATA22Q8NHS9 363 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 ATG4AQ8WYN0 398 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 KLK6Q92876 244 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 PBKQ96KB5 322 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 WDR24Q96S15 920 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 RBM15Q96T37 977 aaKnown RBP eCLIP12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 HINFPQ9BQA5 517 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 VPS45Q9NRW7 570 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 SEMA4GQ9NTN9 838 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 TRHDEQ9UKU6 1024 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 DNPEPQ9ULA0 475 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 TPX2Q9ULW0 747 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms