RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 IRS2Q9Y4H2 1338 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 PSMA4P25789 261 aaKnown RBP17.45■□□□□ 0.38
PTPN21-208ENST00000556564 CSKP41240 450 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 ELP6Q0PNE2 266 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 NOMO1Q15155 1222 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 TEX44Q53QW1 395 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 CDCA2Q69YH5 1023 aaPredicted RBP17.45■□□□□ 0.38
PTPN21-208ENST00000556564 CAMKK1Q8N5S9 505 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 OR4K2Q8NGD2 314 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 SELENOMQ8WWX9 145 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 PHPT1Q9NRX4 125 aaPredicted RBP17.45■□□□□ 0.38
PTPN21-208ENST00000556564 KLHL3Q9UH77 587 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 CCDC154A6NI56 674 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 DAB2P98082 770 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 ZNF844Q08AG5 666 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 FBXO46Q6PJ61 603 aaPredicted RBP17.45■□□□□ 0.38
PTPN21-208ENST00000556564 RBFAQ8N0V3 343 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 EFCAB3Q8N7B9 438 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 DIS3LQ8TF46 1054 aaKnown RBP17.45■□□□□ 0.38
PTPN21-208ENST00000556564 FUBP3Q96I24 572 aaKnown RBP eCLIP17.45■□□□□ 0.38
PTPN21-208ENST00000556564 CCSER2Q9H7U1 834 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 POLMQ9NP87 494 aaPredicted RBP17.45■□□□□ 0.38
PTPN21-208ENST00000556564 SLC27A6Q9Y2P4 619 aa17.45■□□□□ 0.38
PTPN21-208ENST00000556564 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 ENPP3O14638 875 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 ZNF865P0CJ78 1059 aaPredicted RBP17.44■□□□□ 0.38
PTPN21-208ENST00000556564 HOXB8P17481 243 aaPredicted RBP17.44■□□□□ 0.38
PTPN21-208ENST00000556564 CHRNB2P17787 502 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 KELP23276 732 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 XKR6Q5GH73 641 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 DNAJC14Q6Y2X3 702 aaPredicted RBP17.44■□□□□ 0.38
PTPN21-208ENST00000556564 OR52K2Q8NGK3 314 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 PCDHGC4Q9Y5F7 938 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 C17orf99Q6UX52 265 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 CYLDQ9NQC7 956 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 TNPO3Q9Y5L0 923 aaKnown RBP17.44■□□□□ 0.38
PTPN21-208ENST00000556564 TFEBP19484 476 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 MAGEA9P43362 315 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 TEAD2Q15562 447 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 ATAD3BQ5T9A4 648 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 SH3PXD2AQ5TCZ1 1133 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 TXNDC8Q6A555 127 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 KRT78Q8N1N4 520 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 BTN2A2Q8WVV5 523 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 PSMG2Q969U7 264 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 SHBGP04278 402 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 EBNA1BP2Q99848 306 aaKnown RBP17.44■□□□□ 0.38
PTPN21-208ENST00000556564 ASB3Q9Y575 518 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 CHD4Q14839 1912 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 CNMDO75829 334 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 HNRNPH3P31942 346 aaKnown RBP17.44■□□□□ 0.38
PTPN21-208ENST00000556564 RAB10P61026 200 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 CYP4Z1Q86W10 505 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 HDDC3Q8N4P3 179 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 ZNF398Q8TD17 642 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 ATL1Q8WXF7 558 aa17.44■□□□□ 0.38
PTPN21-208ENST00000556564 GFM2Q969S9 779 aaKnown RBP17.44■□□□□ 0.38
PTPN21-208ENST00000556564 PIGRP01833 764 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 POLE2P56282 527 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 ALG3Q92685 438 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 KLHL32Q96NJ5 620 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 CLIC5Q9NZA1 410 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 VTI1BQ9UEU0 232 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 KANSL1LA0AUZ9 987 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 COX7A2P14406 83 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 PPP2R1BP30154 601 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 PRKAA2P54646 552 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 RNF19BQ6ZMZ0 732 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 BNC2Q6ZN30 1099 aaPredicted RBP17.43■□□□□ 0.38
PTPN21-208ENST00000556564 HEPHQ9BQS7 1158 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 ACAT2Q9BWD1 397 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 THAP1Q9NVV9 213 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 TBC1D30Q9Y2I9 924 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 H0Y858 1186 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 WDR47O94967 919 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 GSTM1P09488 218 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 ACSM2AQ08AH3 577 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 FNBP1LQ5T0N5 605 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 ACSM2BQ68CK6 577 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 ARHGAP17Q68EM7 881 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 RIPOR1Q6ZS17 1223 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 CEP70Q8NHQ1 597 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 SMG9Q9H0W8 520 aaKnown RBP17.43■□□□□ 0.38
PTPN21-208ENST00000556564 FSCN2O14926 492 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 DDX3YO15523 660 aaKnown RBP17.43■□□□□ 0.38
PTPN21-208ENST00000556564 RRM2P31350 389 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 PBX1P40424 430 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 PTPN9P43378 593 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 FASTKQ14296 549 aaKnown RBP17.43■□□□□ 0.38
PTPN21-208ENST00000556564 TRIP10Q15642 601 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 LRRC23Q53EV4 343 aaPredicted RBP17.43■□□□□ 0.38
PTPN21-208ENST00000556564 FIG4Q92562 907 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 FEM1CQ96JP0 617 aa17.43■□□□□ 0.38
PTPN21-208ENST00000556564 SLC31A1O15431 190 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 SH3BGRP55822 239 aaPredicted RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 GRM2Q14416 872 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 PLD5Q8N7P1 536 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 SPATA22Q8NHS9 363 aa17.42■□□□□ 0.38
PTPN21-208ENST00000556564 TRMT61BQ9BVS5 477 aaKnown RBP17.42■□□□□ 0.38
PTPN21-208ENST00000556564 DNAJB4Q9UDY4 337 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms