RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 VCX3BQ9H321 246 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 SEMA4BQ9NPR2 832 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 TCAF1Q9Y4C2 921 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 MAGEB16A2A368 324 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 A6NHS1 94 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 GRID2O43424 1007 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 RPL17P18621 184 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 CTXN3Q4LDR2 81 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 KCTD11Q693B1 232 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 GLB1LQ6UWU2 654 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 C16orf59Q7L2K0 433 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 ARHGAP12Q8IWW6 846 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 NTAN1Q96AB6 310 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 DNAJC1Q96KC8 554 aaKnown RBP13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 GRIP2Q9C0E4 1043 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 EFCAB1Q9HAE3 211 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 ABCC13Q9NSE7 274 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 MKS1Q9NXB0 559 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 TIMM22Q9Y584 194 aa13.77□□□□□ -0.21
PRPF40B-209ENST00000548825 HHLA1C9JL84 531 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 UBDO15205 165 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 GPR39O43194 453 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 CABYRO75952 493 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 SERPINH1P50454 418 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 SEMG2Q02383 582 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 PDK3Q15120 406 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 ZBTB46Q86UZ6 589 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 TRPV1Q8NER1 839 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 ACTRT2Q8TDY3 377 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 TRPC4APQ8TEL6 797 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 MRGPRX2Q96LB1 330 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 DDX18Q9NVP1 670 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 C5orf42Q9H799 3197 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 SBK3P0C264 359 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 CHRM3P20309 590 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 ARNTP27540 789 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 FMO4P31512 558 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 C1QTNF8P60827 252 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 CRHR2Q13324 411 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 SCD5Q86SK9 330 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 CUZD1Q86UP6 607 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 NSUN5Q96P11 429 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 SLC9A7Q96T83 725 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 DRC3Q9H069 523 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 GTF2IRD1Q9UHL9 959 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 MID2Q9UJV3 735 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 PTCH2Q9Y6C5 1203 aa13.76□□□□□ -0.21
PRPF40B-209ENST00000548825 SUPT3HB4E1H0 165 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 MATN3O15232 486 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 SUPT3HO75486 399 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 SCNN1AP37088 669 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 SEMA3BQ13214 749 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 TAF12Q16514 161 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 PIK3R6Q5UE93 754 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 FOXB2Q5VYV0 432 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 C16orf89Q6UX73 402 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 OR6K2Q8NGY2 324 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 PPP2R3CQ969Q6 453 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 TUBGCP3Q96CW5 907 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 MID1IP1Q9NPA3 183 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 FAM8A1Q9UBU6 413 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 SAC3D1A6NKF1 404 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 ZNF839A8K0R7 811 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 AKAP10O43572 662 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 LINC00032P0C843 101 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 RPL10P27635 214 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 DPP6P42658 865 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 KCNC1P48547 511 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 TAF10Q12962 218 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 POLD3Q15054 466 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 PLA2G4EQ3MJ16 856 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 LINGO4Q6UY18 593 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 KLHDC9Q8NEP7 349 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 VAT1Q99536 393 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 UBE2OQ9C0C9 1292 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 ABCG8Q9H221 673 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 RPL26L1Q9UNX3 145 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 A0A0D9SEW6 157 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 E7ENX8 843 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 UBXN8O00124 270 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 CBX4O00257 560 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 UGT1A6P19224 532 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 ME2P23368 584 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 KCNQ1P51787 676 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 ADAM17P78536 824 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 HECTD2Q5U5R9 776 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 PQLC1Q8N2U9 271 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 OR7D4Q8NG98 312 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 CEP70Q8NHQ1 597 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 IGSF8Q969P0 613 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 DCUN1D1Q96GG9 259 aa13.75□□□□□ -0.21
PRPF40B-209ENST00000548825 ZNF512Q96ME7 567 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms