RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TPRG1LQ5T0D9 272 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 EFL1Q7Z2Z2 1120 aaKnown RBP12.02□□□□□ -0.49
GABPB1-206ENST00000543881 CLEC14AQ86T13 490 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 DCP2Q8IU60 420 aaKnown RBP12.02□□□□□ -0.49
GABPB1-206ENST00000543881 FAM174AQ8TBP5 190 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 HMCESQ96FZ2 354 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 KLHL32Q96NJ5 620 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 CCNL2Q96S94 520 aaPredicted RBP12.02□□□□□ -0.49
GABPB1-206ENST00000543881 CNPY3Q9BT09 278 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
GABPB1-206ENST00000543881 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
GABPB1-206ENST00000543881 NCKIPSDQ9NZQ3 722 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 HPCAL4Q9UM19 191 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 CSNK1G3Q9Y6M4 447 aa12.02□□□□□ -0.49
GABPB1-206ENST00000543881 RP1P56715 2156 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 EME2A4GXA9 379 aaPredicted RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 WASH4PA8MWX3 477 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 GOLGA6L22H0YM25 854 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 H3BM21 787 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 TNFSF15O95150 251 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 MBD3O95983 291 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 NME1P15531 152 aaKnown RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 ITIH2P19823 946 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 SNRPD1P62314 119 aaKnown RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 FZD2Q14332 565 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 LINC00303Q3SY05 128 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 EFHC2Q5JST6 749 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 LRRC73Q5JTD7 316 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 C6orf132Q5T0Z8 1188 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 E4F1Q66K89 784 aaPredicted RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 CRTC1Q6UUV9 634 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 KYAT3Q6YP21 454 aaKnown RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 ARFGAP1Q8N6T3 406 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 WDR36Q8NI36 951 aaKnown RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 LENG8Q96PV6 779 aaPredicted RBP12.01□□□□□ -0.49
GABPB1-206ENST00000543881 TTYH3Q9C0H2 523 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 GPATCH2LQ9NWQ4 482 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 KLF15Q9UIH9 416 aa12.01□□□□□ -0.49
GABPB1-206ENST00000543881 SPTY2D1-AS1A0A0U1RR47 76 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 ZSCAN5CA6NGD5 496 aaPredicted RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 LRRC53A6NM62 1247 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 TMCO5BA8MYB1 307 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 RASA4BC9J798 803 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 TERTO14746 1132 aaKnown RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 AREL1O15033 823 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 INSIG1O15503 277 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 EFSO43281 561 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 AQP9O43315 295 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 RASA4O43374 803 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 TSPAN6O43657 245 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 TCEA3O75764 348 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 TNFAIP3P21580 790 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 MLLT3P42568 568 aaPredicted RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 YBEYP58557 167 aaPredicted RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 MAMLD1Q13495 774 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 SERINC3Q13530 473 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 CYTH1Q15438 398 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 NR0B2Q15466 257 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 CA9Q16790 459 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 DEFB133Q30KQ1 61 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 INO80DQ53TQ3 878 aaPredicted RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 PERM1Q5SV97 790 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 DCUN1D2Q6PH85 259 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 GDPD4Q6W3E5 623 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 PARGQ86W56 976 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 ZNF354CQ86Y25 554 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 LURAP1LQ8IV03 231 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 UMODL1-AS1Q8N2C9 162 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 RAB7BQ96AH8 199 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 LRRC19Q9H756 370 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 LHX3Q9UBR4 397 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 SALL4Q9UJQ4 1053 aa12□□□□□ -0.49
GABPB1-206ENST00000543881 ATXN7L1Q9ULK2 861 aaPredicted RBP12□□□□□ -0.49
GABPB1-206ENST00000543881 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 CCDC187A0A096LP49 1063 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 ANKRD62A6NC57 917 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 MUSKO15146 869 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 ITGA2BP08514 1039 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 TIMP2P16035 220 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 AIF1P55008 147 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 PFN3P60673 137 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 NFKB2Q00653 900 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 SGCGQ13326 291 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 PARP15Q460N3 678 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 COLEC12Q5KU26 742 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 PLEKHA7Q6IQ23 1121 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 XKR5Q6UX68 686 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 CYP4V2Q6ZWL3 525 aaPredicted RBP11.99□□□□□ -0.49
GABPB1-206ENST00000543881 ZNF571Q7Z3V5 609 aaPredicted RBP11.99□□□□□ -0.49
GABPB1-206ENST00000543881 TTC7BQ86TV6 843 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 LMX1AQ8TE12 382 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 ASB12Q8WXK4 309 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 CENPTQ96BT3 561 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 EXOC2Q96KP1 924 aa11.99□□□□□ -0.49
GABPB1-206ENST00000543881 GDAP1L1Q96MZ0 367 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms