RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 PIGNO95427 931 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 CD48P09326 243 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 CES1P23141 567 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 KDELR1P24390 212 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 GARSP41250 739 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 MMP13P45452 471 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 MMRN1Q13201 1228 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 IFI16Q16666 785 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 NCBP2-AS2Q69YL0 99 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 GCNT7Q6ZNI0 430 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 SPATS2Q86XZ4 545 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 RHOT1Q8IXI2 618 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 NETO2Q8NC67 525 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 PCDH19Q8TAB3 1148 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 ECHDC3Q96DC8 303 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 NUDCD1Q96RS6 583 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 MYOCQ99972 504 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 MGME1Q9BQP7 344 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 MAK16Q9BXY0 300 aaKnown RBP21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 ATP8A1Q9Y2Q0 1164 aa21.52■■□□□ 1.04
UBE2D3-229ENST00000510129 LRRD1A4D1F6 860 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 BUB1BO60566 1050 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 PEX11BO96011 259 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 ZFXP17010 805 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 CCNCP24863 283 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 RGRP47804 291 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 FOXC1Q12948 553 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 PTK2BQ14289 1009 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 ATP13A4Q4VNC1 1196 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 Q6ZSR6 202 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 PTAR1Q7Z6K3 402 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 TP53INP2Q8IXH6 220 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 TSGA13Q96PP4 275 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 FZD3Q9NPG1 666 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 PCDH12Q9NPG4 1184 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 SCUBE2Q9NQ36 999 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 FTSJ1Q9UET6 329 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 ITM2BQ9Y287 266 aa21.51■■□□□ 1.03
UBE2D3-229ENST00000510129 PCNX2A6NKB5 2137 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 A0A0A6YYK5 440 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 RIOK3O14730 519 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 SPINT1O43278 529 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 SPOPO43791 374 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 CDK4P11802 303 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 NOP2P46087 812 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 YPEL5P62699 121 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 IL9RQ01113 521 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 FGL2Q14314 439 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 HS1BP3Q53T59 392 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 TEX26Q8N6G2 289 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 OR13H1Q8NG92 308 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 KLF6Q99612 283 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 GPR27Q9NS67 375 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 GGT7Q9UJ14 662 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 CA5BQ9Y2D0 317 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 PCDHA13Q9Y5I0 950 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 COL5A1P20908 1838 aaPredicted RBP21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 DNAH14Q0VDD8 3507 aa21.5■■□□□ 1.03
UBE2D3-229ENST00000510129 H3BM21 787 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 MFSD11O43934 449 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 MMP20O60882 483 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 NEBLO76041 1014 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 FTH1P19P0C7X4 201 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 KRT10P13645 584 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 CR2P20023 1033 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 FECHP22830 423 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 CLDN2P57739 230 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 FAM193AP78312 1265 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 AGERQ15109 404 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 SHBQ15464 509 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 PRAMEF14Q5SWL7 426 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 NDUFAF2Q8N183 169 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 ADAMTS14Q8WXS8 1223 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 CENPTQ96BT3 561 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 BMFQ96LC9 184 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 RNF157Q96PX1 679 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 POLR1EQ9GZS1 481 aaKnown RBP21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 KCTD5Q9NXV2 234 aa21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.49■■□□□ 1.03
UBE2D3-229ENST00000510129 SPTY2D1-AS1A0A0U1RR47 76 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 NEMP2A6NFY4 417 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 TRAFD1O14545 582 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 MUSKO15146 869 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 MATN3O15232 486 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 HTRA2O43464 458 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 PSTPIP1O43586 416 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 CA4P22748 312 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 MMP12P39900 470 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 PFN3P60673 137 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 LRRC73Q5JTD7 316 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 PARGQ86W56 976 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 TXLNBQ8N3L3 684 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 RAPGEF5Q92565 580 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 HDAC11Q96DB2 347 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 WRAP53Q9BUR4 548 aaKnown RBP21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 IMPACTQ9P2X3 320 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 BTBD3Q9Y2F9 522 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 NEUROG3Q9Y4Z2 214 aa21.48■■□□□ 1.03
UBE2D3-229ENST00000510129 EPN1Q9Y6I3 576 aaPredicted RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms