RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 EIF4A3P38919 411 aaKnown RBP20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 LRRC14Q15048 493 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 NR0B2Q15466 257 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 LRRC73Q5JTD7 316 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 ERAP2Q6P179 960 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 PHACTR4Q8IZ21 702 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 TP53I13Q8NBR0 393 aaPredicted RBP20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 WDR48Q8TAF3 677 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 NAT6Q93015 286 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 ZNF578Q96N58 590 aaPredicted RBP20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 DHX35Q9H5Z1 703 aaKnown RBP20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 AIPL1Q9NZN9 384 aa20.16■□□□□ 0.82
UBE2D3-220ENST00000505307 ASXL3Q9C0F0 2248 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 A0A1W2PQC6 194 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 CFAP69A5D8W1 941 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 TMEM191CA6NGB0 347 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 TMCO5BA8MYB1 307 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 INSIG1O15503 277 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 PRPSAP2O60256 369 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 DXOO77932 396 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 ANXA6P08133 673 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 LSSP48449 732 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 PPARDQ03181 441 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 RFTN1Q14699 578 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 ACAP1Q15027 740 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 AGERQ15109 404 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 ASIC2Q16515 512 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 DEFB133Q30KQ1 61 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 ANO6Q4KMQ2 910 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 PRRT3Q5FWE3 981 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 FAXCQ5TGI0 409 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 SDR16C5Q8N3Y7 309 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 FSTL5Q8N475 847 aaPredicted RBP20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 ATL2Q8NHH9 583 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 EXOC2Q96KP1 924 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 WRAP53Q9BUR4 548 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 BOCQ9BWV1 1114 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 EDEM3Q9BZQ6 932 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 ATP13A3Q9H7F0 1226 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 CAAP1Q9H8G2 361 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 MBNL1Q9NR56 388 aaKnown RBP20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 SCINQ9Y6U3 715 aa20.15■□□□□ 0.82
UBE2D3-220ENST00000505307 CPED1A4D0V7 1026 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 LRRC53A6NM62 1247 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 J3KR12 359 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 CSO75390 466 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 PALMO75781 387 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 PIGNO95427 931 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 FTLP02792 175 aaPredicted RBP20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 MYF5P13349 255 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 ITPKBP27987 946 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 HTR1BP28222 390 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 PRKCIP41743 596 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 HCAR3P49019 387 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 PAPOLAP51003 745 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 NSUN2Q08J23 767 aaKnown RBP eCLIP20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 CDKN3Q16667 212 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 C6orf132Q5T0Z8 1188 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 LVRNQ6Q4G3 990 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 RFX8Q6ZV50 586 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 EFL1Q7Z2Z2 1120 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 LZTR1Q8N653 840 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 NETO2Q8NC67 525 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 SCG3Q8WXD2 468 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 TRIM11Q96F44 468 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 CRELD1Q96HD1 420 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 SNRNP25Q9BV90 132 aaKnown RBP20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 SLC39A8Q9C0K1 460 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 HAUS4Q9H6D7 363 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 POLR1BQ9H9Y6 1135 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 PCDH12Q9NPG4 1184 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 GPATCH2LQ9NWQ4 482 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 PCDHB1Q9Y5F3 818 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 IGSF10Q6WRI0 2623 aa20.14■□□□□ 0.81
UBE2D3-220ENST00000505307 EIF4E1BA6NMX2 242 aaKnown RBP20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 USP12O75317 370 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 GCATO75600 419 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 TCEA3O75764 348 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 MYBL1P10243 752 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ITIH2P19823 946 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 SERPINA4P29622 427 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ADKP55263 362 aaKnown RBP20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ERVPABLB-1P60509 514 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 POLR2LP62875 67 aaKnown RBP20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 IRF4Q15306 451 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ELOCQ15369 112 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ISXQ2M1V0 245 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 AFMIDQ63HM1 303 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ESRP1Q6NXG1 681 aaKnown RBP20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 GUSBP11Q6P575 273 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 SRLQ86TD4 932 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 RBFAQ8N0V3 343 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ZNF248Q8NDW4 579 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 CELF6Q96J87 481 aaKnown RBP20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 UBL7Q96S82 380 aaPredicted RBP20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 LRRC61Q9BV99 259 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 PRORYQ9H606 182 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 MRPL47Q9HD33 250 aaKnown RBP20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 PCSK1NQ9UHG2 260 aa20.13■□□□□ 0.81
UBE2D3-220ENST00000505307 ATP8A1Q9Y2Q0 1164 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms