RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 C9orf64Q5T6V5 341 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 NAPEPLDQ6IQ20 393 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 DENND5AQ6IQ26 1287 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 SERPINA13PQ6UXR4 307 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 PPP1R21Q6ZMI0 780 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 ZNF852Q6ZMS4 543 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 GJD3Q8N144 294 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 AENQ8WTP8 325 aaKnown RBP13.45□□□□□ -0.26
PRDM2-213ENST00000503842 TUBGCP5Q96RT8 1024 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 FMO2Q99518 471 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 HEPHQ9BQS7 1158 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 TDRD1Q9BXT4 1180 aaKnown RBP13.45□□□□□ -0.26
PRDM2-213ENST00000503842 PHACTR1Q9C0D0 580 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 ARNT2Q9HBZ2 717 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 XAB2Q9HCS7 855 aaKnown RBP13.45□□□□□ -0.26
PRDM2-213ENST00000503842 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 CACNA2D2Q9NY47 1150 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 SUN2Q9UH99 717 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 CA14Q9ULX7 337 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 STON1Q9Y6Q2 735 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 WASF2Q9Y6W5 498 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 ANKRD36A6QL64 1941 aa13.45□□□□□ -0.26
PRDM2-213ENST00000503842 KRBA1A5PL33 1030 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 E7ESA3 106 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
PRDM2-213ENST00000503842 FZD6O60353 706 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 SOCS5O75159 536 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 SIN3BO75182 1162 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 USP12O75317 370 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 PIGNO95427 931 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 AGTP01019 485 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 FAM153BP0C7A2 387 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 ATXN1LP0C7T5 689 aaKnown RBP13.44□□□□□ -0.26
PRDM2-213ENST00000503842 ARL4CP56559 192 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 STARD6P59095 220 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 MRPS21P82921 87 aaKnown RBP13.44□□□□□ -0.26
PRDM2-213ENST00000503842 SARNPP82979 210 aaKnown RBP13.44□□□□□ -0.26
PRDM2-213ENST00000503842 RAD51Q06609 339 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 CDK18Q07002 472 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 GRM3Q14832 879 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 PCSK7Q16549 785 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 HIF1AQ16665 826 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 FAM153CQ494X1 144 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 FNBP1LQ5T0N5 605 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 BRICD5Q6PL45 260 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 LINC00523Q86TU6 105 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 CAMK1DQ8IU85 385 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 RYBPQ8N488 228 aaPredicted RBP13.44□□□□□ -0.26
PRDM2-213ENST00000503842 OR52K1Q8NGK4 314 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 GABRG3Q99928 467 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 USB1Q9BQ65 265 aaKnown RBP13.44□□□□□ -0.26
PRDM2-213ENST00000503842 APOL2Q9BQE5 337 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 FSD1LQ9BXM9 530 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 ATP13A3Q9H7F0 1226 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 ZDHHC4Q9NPG8 344 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 PCDHGC4Q9Y5F7 938 aa13.44□□□□□ -0.26
PRDM2-213ENST00000503842 CCDC151A5D8V7 595 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 ALOX15BO15296 676 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 EIF3HO15372 352 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRDM2-213ENST00000503842 BNIP3LO60238 219 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 PGLSO95336 258 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 NDST3O95803 873 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CTSLP07711 333 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 H2AFXP16104 143 aaPredicted RBP13.43□□□□□ -0.26
PRDM2-213ENST00000503842 HLA-DPA1P20036 260 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CD72P21854 359 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CA4P22748 312 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 NTSR1P30989 418 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CHRNA4P43681 627 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 BCL2L1Q07817 233 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CDH17Q12864 832 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CAMK2GQ13555 558 aaPredicted RBP13.43□□□□□ -0.26
PRDM2-213ENST00000503842 ELAVL3Q14576 367 aaKnown RBP13.43□□□□□ -0.26
PRDM2-213ENST00000503842 SLC1A5Q15758 541 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 MSS51Q4VC12 460 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 C2orf27AQ580R0 203 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 SIRPB2Q5JXA9 342 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 TRMT11Q7Z4G4 463 aaKnown RBP13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CHPFQ8IZ52 775 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 PDIK1LQ8N165 341 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 STK40Q8N2I9 435 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 AGGF1Q8N302 714 aaeCLIP13.43□□□□□ -0.263e-6■■□□□ 14
PRDM2-213ENST00000503842 IL17RCQ8NAC3 791 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 ECHDC3Q96DC8 303 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 IFT43Q96FT9 208 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 SHDQ96IW2 340 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 LRIG1Q96JA1 1093 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 ZNF641Q96N77 438 aaPredicted RBP13.43□□□□□ -0.26
PRDM2-213ENST00000503842 FAM129BQ96TA1 746 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 TSPYL1Q9H0U9 437 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 ZDHHC6Q9H6R6 413 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 PRSS16Q9NQE7 514 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 MUTYHQ9UIF7 546 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 FBXL21Q9UKT6 434 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 CHKBQ9Y259 395 aa13.43□□□□□ -0.26
PRDM2-213ENST00000503842 TSPAN11A1L157 253 aa13.42□□□□□ -0.26
PRDM2-213ENST00000503842 AP3B1O00203 1094 aa13.42□□□□□ -0.26
PRDM2-213ENST00000503842 ADAM23O75077 832 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms