RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 NUP107P57740 925 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 USP10Q14694 798 aaKnown RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 FAM187BQ17R55 369 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SLC25A52Q3SY17 297 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 RABGAP1LQ5R372 815 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 TMCO4Q5TGY1 634 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 FAM219BQ5XKK7 198 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 RAP1GAP2Q684P5 730 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 NIPAL1Q6NVV3 410 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 C16orf59Q7L2K0 433 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SLC26A9Q7LBE3 791 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 UNC93AQ86WB7 457 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 EFHBQ8N7U6 833 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 E2F7Q96AV8 911 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 WDR83Q9BRX9 315 aaKnown RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 TMEM120AQ9BXJ8 343 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 NUF2Q9BZD4 464 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 TASP1Q9H6P5 420 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 TLK1Q9UKI8 766 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SPEF1Q9Y4P9 236 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SBF1O95248 1867 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 A0A1W2PQH9 124 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 UBA6A0AVT1 1052 aaPredicted RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 SDR42E2A6NKP2 422 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 PIRO00625 290 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 XKR5Q6UX68 686 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 RPS27LQ71UM5 84 aaKnown RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 RNF180Q86T96 592 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 CHSY1Q86X52 802 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP11-206ENST00000469080 DEPDC4Q8N2C3 294 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 DBF4BQ8NFT6 615 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 BLOC1S5Q8TDH9 187 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 BORCS5Q969J3 196 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SENP6Q9GZR1 1112 aaPredicted RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 DUSP11O75319 330 aaKnown RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 GCAP28676 217 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SEMG2Q02383 582 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 BST1Q10588 318 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 DUSP4Q13115 394 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 GRM2Q14416 872 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SMU1Q2TAY7 513 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 TTC39BQ5VTQ0 682 aaPredicted RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 UGT2A3Q6UWM9 527 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 TAS2R42Q7RTR8 314 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 CAND1Q86VP6 1230 aaKnown RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 ANKRD13BQ86YJ7 626 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 FNIP1Q8TF40 1166 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 AUTS2Q8WXX7 1259 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 FBXO32Q969P5 355 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SMARCD1Q96GM5 515 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 MRPS26Q9BYN8 205 aaKnown RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 PLK2Q9NYY3 685 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 TBC1D14Q9P2M4 693 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 GTF2IRD1Q9UHL9 959 aa12.45□□□□□ -0.42
USP11-206ENST00000469080 SMG5Q9UPR3 1016 aaKnown RBP12.45□□□□□ -0.42
USP11-206ENST00000469080 CDK2AP1O14519 115 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 HSPA4LO95757 839 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 TCN1P20061 433 aaPredicted RBP12.44□□□□□ -0.42
USP11-206ENST00000469080 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
USP11-206ENST00000469080 CCR10P46092 362 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 NKX2-5P52952 324 aaPredicted RBP12.44□□□□□ -0.42
USP11-206ENST00000469080 SP3Q02447 781 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
USP11-206ENST00000469080 SPDYCQ5MJ68 293 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 FBXL19Q6PCT2 694 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 PRSS55Q6UWB4 352 aaPredicted RBP12.44□□□□□ -0.42
USP11-206ENST00000469080 CRLF3Q8IUI8 442 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 OR10T2Q8NGX3 314 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 C10orf82Q8WW14 230 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 TAMM41Q96BW9 452 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 FCRL2Q96LA5 508 aaPredicted RBP12.44□□□□□ -0.42
USP11-206ENST00000469080 SP110Q9HB58 689 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 ERVK-11Q9UQG0 969 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 KLHL41O60662 606 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 CES1P23141 567 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 LHX1P48742 406 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 STX3Q13277 289 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 SLC12A1Q13621 1099 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 PTPRCAPQ14761 206 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 DHDDSQ86SQ9 333 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 C7orf57Q8NEG2 295 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 TMIGD2Q96BF3 282 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 FAR2Q96K12 515 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 CNTN3Q9P232 1028 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 DNAJC16Q9Y2G8 782 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 PPME1Q9Y570 386 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 ACTL7AQ9Y615 435 aa12.44□□□□□ -0.42
USP11-206ENST00000469080 A0A0A0MRY4 1105 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 CCRL2O00421 344 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 KMOO15229 486 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 ITM2AO43736 263 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 POLBP06746 335 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 NME5P56597 212 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 RGS21Q2M5E4 152 aa12.43□□□□□ -0.42
USP11-206ENST00000469080 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms