RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	LRRC19	Q9H756	370 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	GPR27	Q9NS67	375 aa		12.88	□□□□□ -0.35
FDPS-204	ENST00000461507	DSP	P15924	2871 aa	Known RBP	12.87	□□□□□ -0.35
FDPS-204	ENST00000461507		A0A1W2PQU0	124 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	MACROD2	A1Z1Q3	448 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	MFSD11	O43934	449 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	PRAMEF11	O60813	436 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	LCA5L	O95447	670 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	GSR	P00390	522 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ITGAV	P06756	1048 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ITGB7	P26010	798 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	MAT2A	P31153	395 aa	Known RBP	12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	DYNLT1	P63172	113 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	KIF5A	Q12840	1032 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ANKRD20A8P	Q5CZ79	823 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ZSCAN30	Q86W11	494 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	TMPRSS12	Q86WS5	348 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ARHGAP12	Q8IWW6	846 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	TP53INP2	Q8IXH6	220 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	CASKIN2	Q8WXE0	1202 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	VOPP1	Q96AW1	172 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	CNDP2	Q96KP4	475 aa	Known RBP	12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ZNF830	Q96NB3	372 aa	Predicted RBP	12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ZNF670	Q9BS34	389 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	DDX56	Q9NY93	547 aa	Known RBP	12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	IPO11	Q9UI26	975 aa	Known RBP	12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	TTLL3	Q9Y4R7	772 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	MYLK	Q15746	1914 aa		12.87	□□□□□ -0.35
FDPS-204	ENST00000461507	ITPR1	Q14643	2758 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507		A0A0A6YYK5	440 aa	Predicted RBP	12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	NEMP1	O14524	444 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	AP1G1	O43747	822 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	RFPL3	O75679	317 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	UGT2B4	P06133	528 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	PTMA	P06454	111 aa	Known RBP	12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	FECH	P22830	423 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	XPA	P23025	273 aa	Predicted RBP	12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	KDELR1	P24390	212 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	NEK3	P51956	506 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	ILK	Q13418	452 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	STAT4	Q14765	748 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	LLGL1	Q15334	1064 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	KAZN	Q674X7	775 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	FBXL19	Q6PCT2	694 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	DHRS13	Q6UX07	377 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	GCNT7	Q6ZNI0	430 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	ABI3BP	Q7Z7G0	1075 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	BBS5	Q8N3I7	341 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	CCDC112	Q8NEF3	446 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	FAM174A	Q8TBP5	190 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	RAPGEF5	Q92565	580 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	ZFR2	Q9UPR6	939 aa	Known RBP	12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	CA5B	Q9Y2D0	317 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	REXO2	Q9Y3B8	237 aa	Known RBP	12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	GPSM3	Q9Y4H4	160 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	HEY1	Q9Y5J3	304 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	ALG6	Q9Y672	507 aa		12.86	□□□□□ -0.35
FDPS-204	ENST00000461507	RCCD1	A6NED2	376 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	GOLGA8CP	A6NN73	597 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	APOL1	O14791	398 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	PSTPIP1	O43586	416 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	PCDH8	O95206	1070 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	POP4	O95707	220 aa	Known RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	LDOC1	O95751	146 aa	Predicted RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	ADRB3	P13945	408 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	PRLR	P16471	622 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	HNRNPA2B1	P22626	353 aa	Known RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	IL10RB	Q08334	325 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	ITK	Q08881	620 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	BNIP3	Q12983	259 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	LBR	Q14739	615 aa	Known RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	CYTH1	Q15438	398 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	IFI16	Q16666	785 aa	Known RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	PROX2	Q3B8N5	592 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	INO80D	Q53TQ3	878 aa	Predicted RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	LRRC73	Q5JTD7	316 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	TMCO4	Q5TGY1	634 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	NCBP2-AS2	Q69YL0	99 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	KIAA1161	Q6NSJ0	714 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	C11orf63	Q6NUN7	778 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	PARS2	Q7L3T8	475 aa	Known RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	TMEM139	Q8IV31	216 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	CACTIN-AS1	Q8N1I8	211 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	EID2	Q8N6I1	236 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	CCNY	Q8ND76	341 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	TPCN2	Q8NHX9	752 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	PCDH19	Q8TAB3	1148 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	MDM1	Q8TC05	714 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	IFT43	Q96FT9	208 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	KLHDC7B	Q96G42	594 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	LRIG1	Q96JA1	1093 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	KLHL32	Q96NJ5	620 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	LHX3	Q9UBR4	397 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	DUSP10	Q9Y6W6	482 aa		12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	URB1	O60287	2271 aa	Known RBP	12.85	□□□□□ -0.35
FDPS-204	ENST00000461507	TDRD6	O60522	2096 aa	Known RBP	12.84	□□□□□ -0.35
FDPS-204	ENST00000461507	PIGN	O95427	931 aa		12.84	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms