RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 NFATC4Q14934 902 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 ARHGEF6Q15052 776 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 TBRG1Q3YBR2 411 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 PLK5Q496M5 336 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 FNBP1LQ5T0N5 605 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 OTUD1Q5VV17 481 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 SUSD4Q5VX71 490 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 CAPRIN2Q6IMN6 1127 aaKnown RBP5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 XRRA1Q6P2D8 792 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 DLK2Q6UY11 383 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 ZNF34Q8IZ26 560 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 NGEFQ8N5V2 710 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 EYA3Q99504 573 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 RTKNQ9BST9 563 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 UTP14AQ9BVJ6 771 aaKnown RBP5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 HDHD5Q9BXW7 423 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 SEZ6LQ9BYH1 1024 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 ACTR5Q9H9F9 607 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 SLC25A13Q9UJS0 675 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 ZNF112Q9UJU3 913 aa5.24□□□□□ -1.57
HMGB3P5-201ENST00000428894 ABCC4O15439 1325 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CKAP5Q14008 2032 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 YDJCA8MPS7 323 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 ACOT8O14734 319 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 HTATSF1O43719 755 aaKnown RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 HEXIM1O94992 359 aaKnown RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 PAPSS2O95340 614 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 FGF3P11487 239 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CHRNB2P17787 502 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 PRPH2P23942 346 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 GPTP24298 496 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CDK7P50613 346 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 OAZ1P54368 228 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CRYZQ08257 329 aaKnown RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 RPS6KA2Q15349 733 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 TAF7Q15545 349 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 PFKFB4Q16877 469 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 HSP90AB3PQ58FF7 597 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 VWA5B1Q5TIE3 1220 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CCSAPQ6IQ19 270 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 PGBD2Q6P3X8 592 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 NFRKBQ6P4R8 1299 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 LRRC57Q8N9N7 239 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 EID2BQ96D98 161 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 PHF21BQ96EK2 531 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CDCA5Q96FF9 252 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 FAM84BQ96KN1 310 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 KATNAL1Q9BW62 490 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 PCGF6Q9BYE7 350 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 HIPK3Q9H422 1215 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CATSPERBQ9H7T0 1116 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 SEPSECSQ9HD40 501 aaKnown RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 HERC5Q9UII4 1024 aaKnown RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 FZD10Q9ULW2 581 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 ICKQ9UPZ9 632 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 LRCH1Q9Y2L9 728 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 RRP7AQ9Y3A4 280 aaKnown RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 TRIM17Q9Y577 477 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 ABCC12Q96J65 1359 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 RBBP6Q7Z6E9 1792 aaKnown RBP5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 CEP290O15078 2479 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 NOTCH4Q99466 2003 aa5.23□□□□□ -1.57
HMGB3P5-201ENST00000428894 COL6A3P12111 3177 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ANKRD36CQ5JPF3 1778 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 PAPPA2Q9BXP8 1791 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 STMND1H3BQB6 276 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 I6L893 689 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 GRM8O00222 908 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ACTL6BO94805 426 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ITGA2BP08514 1039 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 IFIT2P09913 472 aaKnown RBP5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 PKMP14618 531 aaKnown RBP5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 MMP14P50281 582 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 PMS2P54278 862 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 TMPRSS3P57727 454 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 DSCR9P59020 149 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ZP1P60852 638 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ABATP80404 500 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 CDK18Q07002 472 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 Q0VFX4 171 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 GRAPQ13588 217 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 KEAP1Q14145 624 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 DNTTIP2Q5QJE6 756 aaKnown RBP5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 FAM171A1Q5VUB5 890 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 MTFR2Q6P444 385 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 SLC44A2Q8IWA5 706 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 SPATA3Q8NHX4 192 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 GRAPLQ8TC17 118 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ERO1AQ96HE7 468 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ELAC1Q9H777 363 aaKnown RBP5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 Q9N2J8 555 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 ZDHHC7Q9NXF8 308 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 GGA3Q9NZ52 723 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 DAPP1Q9UN19 280 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 NUDCQ9Y266 331 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 RAP2CQ9Y3L5 183 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 TRIOBPQ9H2D6 2365 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 UBN2Q6ZU65 1347 aa5.22□□□□□ -1.57
HMGB3P5-201ENST00000428894 A0A087WV62 115 aa5.21□□□□□ -1.58
HMGB3P5-201ENST00000428894 SAC3D1A6NKF1 404 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms