RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 HMGCRP04035 888 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 HTR1AP08908 422 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
HERC3-203ENST00000407637 NAGLUP54802 743 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 BST2Q10589 180 aaKnown RBP12.89□□□□□ -0.35
HERC3-203ENST00000407637 FASTKQ14296 549 aaKnown RBP12.89□□□□□ -0.35
HERC3-203ENST00000407637 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
HERC3-203ENST00000407637 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 ZNF560Q96MR9 790 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 RETREG1Q9H6L5 497 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 KMT5AQ9NQR1 393 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 KIAA1257Q9ULG3 409 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
HERC3-203ENST00000407637 SDHDO14521 159 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 UPK1BO75841 260 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 CRHBPP24387 322 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 GP5P40197 560 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 ACOT2P49753 483 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 DMP1Q13316 513 aaPredicted RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 NPTX1Q15818 432 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 IMPG1Q17R60 797 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 DPY19L1Q2PZI1 675 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 ADPRMQ3LIE5 342 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 ATAD3CQ5T2N8 411 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 AGMOQ6ZNB7 445 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 CCDC103Q8IW40 242 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 GLMNQ92990 594 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 SLC45A3Q96JT2 553 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 RPL10LQ96L21 214 aaKnown RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 VPS33BQ9H267 617 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 VTI1BQ9UEU0 232 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 DAGLAQ9Y4D2 1042 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 SPEF1Q9Y4P9 236 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 CCDC78A2IDD5 438 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 AREL1O15033 823 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 TBX1O43435 398 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 KRT6AP02538 564 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 ALBP02768 609 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 KRT6BP04259 564 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 TPSB2P20231 275 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 ATP2B4P23634 1241 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 MGAT1P26572 445 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 GP2P55259 537 aaKnown RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 TFDP2Q14188 446 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 CDK10Q15131 360 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 TPSAB1Q15661 275 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 TRIM71Q2Q1W2 868 aaKnown RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 SH3PXD2AQ5TCZ1 1133 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 LIPMQ5VYY2 423 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 TBPL2Q6SJ96 375 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 OTOP3Q7RTS5 596 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 LSMEM2Q8N112 164 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 PIK3C3Q8NEB9 887 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 TFAP2BQ92481 460 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 MUL1Q969V5 352 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 TMEM246Q9BRR3 403 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 BTBD2Q9BX70 525 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 ACE2Q9BYF1 805 aaPredicted RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 RPAP3Q9H6T3 665 aaPredicted RBP12.88□□□□□ -0.35
HERC3-203ENST00000407637 TRIM39Q9HCM9 518 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 ITM2CQ9NQX7 267 aa12.88□□□□□ -0.35
HERC3-203ENST00000407637 SEC24AO95486 1093 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 TBXAS1P24557 533 aaPredicted RBP12.87□□□□□ -0.35
HERC3-203ENST00000407637 CD68P34810 354 aaPredicted RBP12.87□□□□□ -0.35
HERC3-203ENST00000407637 MAGEA12P43365 314 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 PPP5CP53041 499 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 PGGT1BP53609 377 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 VBP1P61758 197 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 CCNA1P78396 465 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 SPP2Q13103 211 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 UGCGQ16739 394 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 DGUOKQ16854 277 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 CYS1Q717R9 158 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 SPATC1Q76KD6 591 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 ADGRG5Q8IZF4 528 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 PELI3Q8N2H9 469 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 OR9I1Q8NGQ6 314 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 LRCH3Q96II8 777 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 MAP6Q96JE9 813 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 DEPDC7Q96QD5 511 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 RUBCNLQ9H714 662 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 IL1RL2Q9HB29 575 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 TLR9Q9NR96 1032 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 PLSCR3Q9NRY6 295 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 FKBP14Q9NWM8 211 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 GPATCH2LQ9NWQ4 482 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 IL37Q9NZH6 218 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 CYTH4Q9UIA0 394 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 ZNF541Q9H0D2 1346 aa12.87□□□□□ -0.35
HERC3-203ENST00000407637 NME4O00746 187 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms