RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 C1orf146Q5VVC0 180 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 ALG1LQ6GMV1 187 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 LDB1Q86U70 411 aaPredicted RBP15.52■□□□□ 0.07
CPSF7-202ENST00000394888 TMEM173Q86WV6 379 aaPredicted RBP15.52■□□□□ 0.07
CPSF7-202ENST00000394888 PPP4R1Q8TF05 950 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 GSTO2Q9H4Y5 243 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 NSMCE4AQ9NXX6 385 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 IKZF3Q9UKT9 509 aa15.52■□□□□ 0.07
CPSF7-202ENST00000394888 RNASEH1O60930 286 aaKnown RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 LBRQ14739 615 aaKnown RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 UGT3A2Q3SY77 523 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 C5orf22Q49AR2 442 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 IRGCQ6NXR0 463 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 FBXL19Q6PCT2 694 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 PTERQ96BW5 349 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 ECSITQ9BQ95 431 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 ILKAPQ9H0C8 392 aaPredicted RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 ABI2Q9NYB9 513 aaPredicted RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 PCDHGB4Q9UN71 923 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 PCDHGB5Q9Y5G0 923 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 A8MT66 165 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 ACOT8O14734 319 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 NPHS1O60500 1241 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 HSPA1AP0DMV8 641 aaKnown RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 HSPA1BP0DMV9 641 aaKnown RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 NCF2P19878 526 aaPredicted RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 SERPINB5P36952 375 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 GATMP50440 423 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 PRPSAP1Q14558 356 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 VARS2Q5ST30 1063 aaKnown RBP15.51■□□□□ 0.07
CPSF7-202ENST00000394888 MON1AQ86VX9 555 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 NUP93Q8N1F7 819 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 GDPD5Q8WTR4 605 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 RNF34Q969K3 372 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 SERPINB11Q96P15 392 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 EBF3Q9H4W6 596 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 SP110Q9HB58 689 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 PTPRSQ13332 1948 aa15.51■□□□□ 0.07
CPSF7-202ENST00000394888 AP3B1O00203 1094 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 FBP2O00757 339 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 APOA4P06727 396 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 CPB1P15086 417 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 RHOQP17081 205 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PAX3P23760 479 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 ACVRL1P37023 503 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 CD86P42081 329 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 THOP1P52888 689 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 YBX1P67809 324 aaKnown RBP15.5■□□□□ 0.07
CPSF7-202ENST00000394888 TBL3Q12788 808 aaKnown RBP15.5■□□□□ 0.07
CPSF7-202ENST00000394888 LPCAT4Q643R3 524 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PIM3Q86V86 326 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 ACOT9Q9Y305 439 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 SLC6A4P31645 630 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 DHDDSQ86SQ9 333 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 LILRA2Q8N149 483 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 ATAD1Q8NBU5 361 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PPHLN1Q8NEY8 458 aaKnown RBP15.5■□□□□ 0.07
CPSF7-202ENST00000394888 SPPL2BQ8TCT7 592 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PDCD6IPQ8WUM4 868 aaKnown RBP15.5■□□□□ 0.07
CPSF7-202ENST00000394888 FAM96AQ9H5X1 160 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 DONSONQ9NYP3 566 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 STX16-NPEPL1H3BU86 382 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 NEMP1O14524 444 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PAPSS2O95340 614 aaPredicted RBP15.5■□□□□ 0.07
CPSF7-202ENST00000394888 SAT1P21673 171 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 MAGEA11P43364 429 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PRKAA2P54646 552 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PCSK7Q16549 785 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 PPP1R3AQ16821 1122 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 TIGD7Q6NT04 549 aaPredicted RBP15.5■□□□□ 0.07
CPSF7-202ENST00000394888 CMTM5Q96DZ9 223 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 FUBP3Q96I24 572 aaKnown RBP eCLIP15.5■□□□□ 0.07
CPSF7-202ENST00000394888 CYP4F11Q9HBI6 524 aa15.5■□□□□ 0.07
CPSF7-202ENST00000394888 A0A1B0GTL3 188 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 PRSS56P0CW18 603 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 PRKAR2AP13861 404 aaKnown RBP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 PSMA3P25788 255 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 PEX2P28328 305 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 TSPY1Q01534 308 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 SERINC3Q13530 473 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 MUM1Q2TAK8 710 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 IZUMO2Q6UXV1 221 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 ISCA2Q86U28 154 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 SNX32Q86XE0 403 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 DSELQ8IZU8 1212 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 TRIM62Q9BVG3 475 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 MEAF6Q9HAF1 191 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 EOMESO95936 686 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 BMP1P13497 986 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 STMN1P16949 149 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 ATF6P18850 670 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 HOXD9P28356 352 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-202ENST00000394888 SUOXP51687 545 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 HK2P52789 917 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 POU4F1Q01851 419 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 CUL3Q13618 768 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 SEL1L3Q68CR1 1132 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 NEPROQ6NW34 567 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 TAS1R1Q7RTX1 841 aa15.49■□□□□ 0.07
CPSF7-202ENST00000394888 ARHGAP24Q8N264 748 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms