RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 E2F2Q14209 437 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 STILQ15468 1287 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 TMEM198Q66K66 360 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 ZNF781Q8N8C0 355 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 MFSD3Q96ES6 412 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 C11orf84Q9BUA3 381 aaPredicted RBP17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 OSBPL11Q9BXB4 747 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 STN1Q9H668 368 aaKnown RBP17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 SHROOM3Q8TF72 1996 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 PGK1P00558 417 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 DPP6P42658 865 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 PRAMEP78395 509 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 KLF10Q13118 480 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 GPR107Q5VW38 600 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 CXCL17Q6UXB2 119 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 ARNTL2Q8WYA1 636 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 QKIQ96PU8 341 aaKnown RBP eCLIP17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 DOK1Q99704 481 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 RTKNQ9BST9 563 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 COG4Q9H9E3 785 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 DDIT4Q9NX09 232 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 B3GNT3Q9Y2A9 372 aa17.45■□□□□ 0.38
LDLRAP1-201ENST00000374338 A8MU76 341 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 EEF2KO00418 725 aaKnown RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 KPNA4O00629 521 aaPredicted RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 ERCC2P18074 760 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PCLAFQ15004 111 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 OXA1LQ15070 435 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PPP2R2DQ66LE6 453 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PCED1BQ96HM7 432 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 TMEM209Q96SK2 561 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 ATXN3LQ9H3M9 355 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 XPNPEP3Q9NQH7 507 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 RIC8BQ9NVN3 520 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PCDHA11Q9Y5I1 949 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 USP3Q9Y6I4 520 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 NRCAMQ92823 1304 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 A0A087WXM4 84 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 TRIM64CA6NLI5 447 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 ZNF195O14628 629 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 GCATO75600 419 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PRKCHP24723 683 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 CRHR1P34998 444 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PSEN2P49810 448 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 SCNN1GP51170 649 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 IRF9Q00978 393 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 CEACAM7Q14002 265 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 IKBKEQ14164 716 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 GPR162Q16538 588 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 TIGD2Q4W5G0 525 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 ARHGAP36Q6ZRI8 547 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 IGFN1Q86VF2 1251 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PLD6Q8N2A8 252 aaKnown RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 LRRC52Q8N7C0 313 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 ANKK1Q8NFD2 765 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 ATP6V1E2Q96A05 226 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 MRPL46Q9H2W6 279 aaKnown RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PDE4DIPQ5VU43 2346 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PLXNB2O15031 1838 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 A0A0A0MRY4 1105 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 DYTNA2CJ06 578 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 F2P00734 622 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 TSHRP16473 764 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 NPR3P17342 541 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 ENDOUP21128 410 aaKnown RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PGFP49763 221 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 CACNB2Q08289 660 aaPredicted RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 LSM12Q3MHD2 195 aaKnown RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 SLC25A52Q3SY17 297 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 CENPIQ92674 756 aaPredicted RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 SPATA13Q96N96 652 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 SERPINI1Q99574 410 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 FRMD8Q9BZ67 464 aaPredicted RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 NAA50Q9GZZ1 169 aaKnown RBP17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 PLEKHA5Q9HAU0 1116 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 TMEM216Q9P0N5 145 aa17.44■□□□□ 0.38
LDLRAP1-201ENST00000374338 NOTOA8MTQ0 251 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 ZBTB24O43167 697 aaPredicted RBP17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 AVPR1AP37288 418 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 PTPN9P43378 593 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 BRCC3P46736 316 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 GALNT2Q10471 571 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 ARHGAP17Q68EM7 881 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 TMEM26Q6ZUK4 368 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 ARCQ7LC44 396 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 CRYBG2Q8N1P7 616 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 ZNF420Q8TAQ5 688 aaPredicted RBP17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 RNF34Q969K3 372 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 ZNF669Q96BR6 464 aaPredicted RBP17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 RCN3Q96D15 328 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 RTP4Q96DX8 246 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 SENP8Q96LD8 212 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 PSD2Q9BQI7 771 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 DUSP16Q9BY84 665 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 DAPK2Q9UIK4 370 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 PRPF19Q9UMS4 504 aaKnown RBP17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 CPQQ9Y646 472 aa17.43■□□□□ 0.38
LDLRAP1-201ENST00000374338 SLC30A1Q9Y6M5 507 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms