RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 C16orf72Q14CZ0 275 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 PREPLQ4J6C6 727 aaPredicted RBP9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 MTX3Q5HYI7 312 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 RETSATQ6NUM9 610 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 PNPT1Q8TCS8 783 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 RELTQ969Z4 430 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 LRRC39Q96DD0 335 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 CIB1Q99828 191 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 SH3GL3Q99963 347 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 LHX5Q9H2C1 402 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 AGO3Q9H9G7 860 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 PIGVQ9NUD9 493 aa9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 CHCHD3Q9NX63 227 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-202ENST00000371122 GVINP1Q7Z2Y8 2422 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 COL4A5P29400 1685 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 CCDC154A6NI56 674 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 MEIS3P2A8K0S8 358 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 KCNU1A8MYU2 1149 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 STX16-NPEPL1H3BU86 382 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ITM2AO43736 263 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 TBL1XO60907 577 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 LTA4HP09960 611 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PIK3R1P27986 724 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 MMP14P50281 582 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 CRYBB1P53674 252 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 TAS2R39P59534 338 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 RAB10P61026 200 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 KCNA10Q16322 511 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 TIGD5Q53EQ6 642 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 C1orf220Q5T0J3 134 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 LPCAT2Q7L5N7 544 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 YTHDF3Q7Z739 585 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 GLMNQ92990 594 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PSMG2Q969U7 264 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 SCLYQ96I15 445 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 DEFB118Q96PH6 123 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 BBS2Q9BXC9 721 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PAIP1Q9H074 479 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 CERS4Q9HA82 394 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 SAR1AQ9NR31 198 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 GKN1Q9NS71 199 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 SIX4Q9UIU6 781 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 VWA7Q9Y334 891 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 MYH13Q9UKX3 1938 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 DNAJC13O75165 2243 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 HACD1B0YJ81 288 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ABHD2P08910 425 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 GJA1P17302 382 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 FASP25445 335 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 IL2P60568 153 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 BCL2L1Q07817 233 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ABRQ12979 859 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 SPRED3Q2MJR0 410 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 WLSQ5T9L3 541 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 SCARA3Q6AZY7 606 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PRSS55Q6UWB4 352 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 USP50Q70EL3 339 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 LRRC8DQ7L1W4 858 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 TRAPPC5Q8IUR0 188 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ZDHHC14Q8IZN3 488 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 AUTS2Q8WXX7 1259 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 CCDC126Q96EE4 140 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 TSSK3Q96PN8 268 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 SLC39A3Q9BRY0 314 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 R3HDMLQ9H3Y0 253 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 FZD8Q9H461 694 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ST6GALNAC4Q9H4F1 302 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 HMX1Q9NP08 348 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 CDH9Q9ULB4 789 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 HBS1LQ9Y450 684 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 MAST2Q6P0Q8 1798 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 LTBP3Q9NS15 1303 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 NRP1O14786 923 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 TP73O15350 636 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 CASP9P55211 416 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 GPX6P59796 221 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 RPL38P63173 70 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ITGA7Q13683 1181 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 AASDHQ4L235 1098 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 MFSD5Q6N075 450 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 GPR141Q7Z602 305 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PHACTR4Q8IZ21 702 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 LRRC52Q8N7C0 313 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ARRDC4Q8NCT1 418 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 NACC2Q96BF6 587 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 CADM1Q9BY67 442 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ZYG11BQ9C0D3 744 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 LRMDAQ9H2I8 198 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 TNKS2Q9H2K2 1166 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 RIBC2Q9H4K1 309 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 GLOD4Q9HC38 313 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PDP2Q9P2J9 529 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PADI4Q9UM07 663 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 PSAT1Q9Y617 370 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 AKAP11Q9UKA4 1901 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 RP1P56715 2156 aa9.16□□□□□ -0.94
SMARCA1-202ENST00000371122 ARL5CA6NH57 179 aa9.15□□□□□ -0.94
SMARCA1-202ENST00000371122 FAM58BPP0C7Q3 252 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 413.9 ms